Candidatus Mycobacterium methanotrophicum: M5I08_18820
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Entry
M5I08_18820 CDS
T08748
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M5I08_18820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmeh03019
]
M5I08_18820
03016 Transfer RNA biogenesis [BR:
mmeh03016
]
M5I08_18820
Enzymes [BR:
mmeh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
M5I08_18820
Messenger RNA biogenesis [BR:
mmeh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M5I08_18820
Transfer RNA biogenesis [BR:
mmeh03016
]
Prokaryotic type
tRNA degradation factors
M5I08_18820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_NusA_1st
KH_KhpA-B
KH_PNO1_2nd
S1_RRP5
KH_2
Motif
Other DBs
NCBI-ProteinID:
UQX10211
UniProt:
A0ABY4QI33
LinkDB
All DBs
Position
complement(3622048..3624360)
Genome browser
AA seq
770 aa
AA seq
DB search
MSVAEIDEGVFEATAVIDNGSFGTRTIRFETGRLAQQAAGAVAAYLDDETMLLSATTAGK
TPKEQFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR
NEIQVVVTILSLDPNELYDVVAINAASASTQLAGLPFSGPVGGVRVALIDGTWVAFPTVE
QTERAVFDMVVAGRVVSGTGDNADVAIMMVEAEATENVIELVAGGAQAPTESVVAQGLEA
AKPFIAALCSAQQELADAAAKPTAEYPVFPDYGDDVYSSVSSVATEELSAALTISGKNER
NARTDEIKVQVLQRLADTYAGREKEVGAAFRALTKKLVRQRILSDHFRIDGRGVTDIRAL
SAEVAVVPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPFST
GETGRVGSPKRREIGHGALAERALIPVLPSVEEFPYAIRQVSEALSSNGSTSMGSVCAST
LALLNAGVPLKAPVAGIAMGLVSDDIEVEETEGGGTERRFVTLTDILGAEDAFGDMDFKC
AGTKNFVTALQLDTKLDGIPSQVLAGALEQAKDARLTILEVMAEAIDEPDEMSPYAPRVT
TIKVPVDKIGEVIGPKGKIINAITEETGAQISIEDDGTVFVGAVDGPSAQAAIDRINAIA
NPQLPKTGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRVARVEDVVTVGDKLR
VEIADIDKRGKISLVLVEEGAAESGNGDAASPAPEPASSPSEADAATTRS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagctgaaattgacgaaggcgtgttcgaagcgaccgccgttatcgacaacggg
agcttcggcacccgcaccatccgatttgagaccggccggttggcccagcaagccgccggc
gccgtcgccgcctacctcgacgacgagaccatgctgctgtcggcgaccaccgccggcaag
acccccaaagagcaattcgacttctttccgctgaccgtcgacgtcgaggagcggatgtat
gccgccggccgcatccccggctcgttcttccgtcgcgaaggccggccctcgaccgacgcg
atcctgacctgccggctcatcgaccgcccgctgcgcccgtcgttcgtcgacgggttgcgc
aacgagatccaggtcgtggtgacgatcctgagcctggaccccaacgagctctacgacgtc
gtggccatcaacgccgcgtcggcgtccacccagctggcgggcctgccgttctccggcccg
gtcggcggcgtgcgagtggcgctgatcgacggcacctgggtcgcgttccccaccgtcgag
cagaccgagcgcgcggtcttcgacatggtggtcgccgggcgggtggtctcaggcaccggt
gacaacgccgacgtggccatcatgatggtcgaagccgaggctaccgagaacgtcatcgag
ctggtcgcaggcggcgcccaggcgcccaccgaaagcgttgtggcacaaggcctggaggcc
gccaagccgttcatcgcggcgctgtgtagcgcccagcaggagctggccgacgctgcggcg
aaaccgaccgccgaataccccgtgttccccgactacggcgacgacgtgtactcctcggtg
tcctcggtggccaccgaggagctgtccgccgcgctgaccatctccggcaagaacgagcgc
aatgcccgcactgacgaaatcaaggttcaggtgctccagcggctggccgacacctacgcc
ggccgggagaaagaagtcggggcggcgtttcgtgcactgaccaaaaagctggtgcgccaa
cgcatcctgagcgatcacttccgcatcgacggccgcggcgtcaccgacatccgcgcgctg
tcagcagaagtcgcggtggtgccacgggcgcacggcagcgcgctgttcgagcgcggcgaa
acccagatcctgggcgtcaccaccctcgacatggtcaagatggctcagcagatcgactcg
ctgggcccggagacctccaagcgctacatgcaccactacaacttcccaccgttctccacc
ggcgagaccggacgcgtgggctcacccaagcggcgcgagatcggccacggcgcgctggcc
gaacgcgcgctgatcccggtgctgcccagcgtcgaggagttcccctacgccatccgtcag
gtctccgaagcgttgagctccaacggttccacgtcgatgggctcggtatgcgcgtcgacg
ctggcgttactcaacgccggggtgccgctgaaggcaccggtcgccggcatcgcgatgggc
ctggtctccgatgacatagaggttgaagagaccgagggcgggggcaccgagcgccgcttt
gtcaccctgaccgacatcttgggcgccgaggacgcgttcggggacatggacttcaagtgc
gccggtaccaagaacttcgtcaccgcgctgcagctggacaccaaactcgacgggattccg
tcgcaggtgctcgcgggcgcgctcgagcaggccaaagacgcccggctgaccatcttggag
gtgatggccgaggccatcgacgaacccgacgagatgagcccctatgcgccccgggtcacc
acgatcaaggtgcccgtggacaagatcggcgaggtgatcggccctaagggcaagatcatc
aacgcgatcaccgaggaaaccggcgcgcagatctccatcgaggacgacggcacggtgttc
gtcggcgccgtcgacggaccttcggcgcaggccgcgatcgaccggatcaacgcgattgcc
aacccgcagctgcccaagaccggcgagcgattcctcggaacggtggtcaagaccaccgac
ttcggtgcgttcgtgtcgctgctgcccggccgcgacgggttggtgcatatctccaaactc
ggcaagggcaaacgcgtcgccagggtcgaggacgtcgtcaccgtcggcgacaagttgcgc
gtggaaatcgccgacatcgacaagcgcggcaagatctcgctggtgctcgtggaggaagga
gccgcagaatccggcaacggcgacgcagcaagccccgccccggagcccgcatcgtcgcct
tcggaagccgatgccgcgacgacccgcagttag
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