Candidatus Mycobacterium methanotrophicum: M5I08_18865
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Entry
M5I08_18865 CDS
T08748
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmeh03016
]
M5I08_18865 (truB)
Enzymes [BR:
mmeh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
M5I08_18865 (truB)
Transfer RNA biogenesis [BR:
mmeh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M5I08_18865 (truB)
Prokaryotic type
M5I08_18865 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UQX10218
LinkDB
All DBs
Position
complement(3628741..3629619)
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AA seq
292 aa
AA seq
DB search
MTAGLVIVDKPAGMTSHDVVGRCRRIFGTRRVGHAGTLDPMATGVLVIGIERATKILGLL
TGASKSYAATIRLGRTTSTDDAEGQLLQQVSTEHLTDSAIVAAIAGLRGDIMQVPSAVSA
VKVGGQRAYKLAREGQAVELAARPVRIDRFEMLALRRGSGVIDLDVAVDCSSGTYIRALA
RDLGGALAVGGHLTALRRTHVGRFGVDQARSLDALAERPELSLTLDQACLQLFARRALTA
EQADAAANGRRLSPAGIDGVYAAHDANGRVIALLRDDGPTTKSVVVIRPATL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgactgccggcctcgtcatcgtcgacaaaccggccgggatgaccagccacgacgttgtc
gggcggtgccgacgcatcttcggcacccgccgggtcggtcacgccggaacgctggacccg
atggccaccggcgtgctggtgatcgggatcgagcgcgccaccaagatcctggggttgctc
accggcgcgtcgaagtcgtatgcggccaccatccgactcggtcggaccacctcgacggat
gacgctgaaggccaactgctgcaacaggtttcaacagagcacctgaccgactcggctatc
gtcgccgcgatcgccgggttgcgcggcgacatcatgcaggtgccgtcggcggtcagcgcc
gtcaaggtcggcggccagcgcgcctacaagctcgcccgagagggtcaggccgtcgagctg
gccgcgcggccggtgcgcatcgaccggttcgagatgctggccctacgccgcgggagcggc
gtgatcgatctcgatgtcgcggtggactgttcgtcgggaacctacatccgcgccctggcc
cgcgacctgggcggcgcgctggcggtcggcggtcacctgaccgcgttgcggcgcacccat
gtgggacggttcggtgtggaccaggcacgctcgctcgacgcgctggccgagcggccggag
ctgagcttgaccctcgaccaggcgtgcctgcagctgtttgcccgccgcgcgctgaccgcc
gagcaggccgacgcggccgccaacggccggcgcctcagcccggccggcatcgacggcgtc
tacgccgcccacgacgcaaacggccgggtgatcgcgctgctgcgcgacgacggcccgacg
accaagtcggtggtcgtgatccggccggccaccttgtga
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