Candidatus Mycobacterium methanotrophicum: M5I08_21045
Help
Entry
M5I08_21045 CDS
T08748
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh00521
Streptomycin biosynthesis
mmeh00523
Polyketide sugar unit biosynthesis
mmeh00525
Acarbose and validamycin biosynthesis
mmeh00541
Biosynthesis of various nucleotide sugars
mmeh01100
Metabolic pathways
mmeh01110
Biosynthesis of secondary metabolites
mmeh01250
Biosynthesis of nucleotide sugars
Module
mmeh_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
M5I08_21045 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
M5I08_21045 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
M5I08_21045 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
M5I08_21045 (rfbB)
00525 Acarbose and validamycin biosynthesis
M5I08_21045 (rfbB)
Enzymes [BR:
mmeh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
M5I08_21045 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
Sacchrp_dh_NADP
NmrA
KR
Motif
Other DBs
NCBI-ProteinID:
UQX10521
LinkDB
All DBs
Position
4021064..4022059
Genome browser
AA seq
331 aa
AA seq
DB search
MRLLVTGGAGFIGANFVHTTVREHPEDTVTVLDAVTYAGSRESLAPVENNIRLVQGDIND
AELVSCLVAEADAVVHFAAETHVDNALADPAPFLQANVIGTFTILEAVRRHGVRLHHVST
DEVYGDLALDDPQRFTESTPYNPSSPYSSTKAASDMLVRAWVRSYDVCATISNCSNNYGP
YQHVEKFIPRQITNVLTGRRPKLYGKGANVRDWVHVEDHNDAVRRILTSGQAGRTYLIGA
EGERDNLSVLQTLLQLMGQDPDDFDYVVDRAGHDLRYAIDPTSLCDELGWAPKHTDFTEG
LRATIDWYRDNEPWWGPLKAAVETRYQQWGR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgctggtgaccggcggcgctggtttcatcggcgccaactttgtgcacaccact
gtgcgcgagcacccggaggacacggtgacggtgctcgacgcggtgacttatgccggcagc
cgcgaatcgctggcccccgtcgaaaacaacatccggctggttcagggcgacatcaacgac
gccgagctggtttcctgccttgtcgccgaggctgacgcggtggtgcatttcgccgccgaa
acccacgtcgacaacgcgttggccgatccggccccgtttttgcaggccaacgtgatcggg
acgttcaccattctggaggcggtacggcggcacggggtgcggctgcatcacgtctccacc
gacgaggtgtacggcgatcttgcgctcgacgatccgcagcgattcaccgaatccacgccc
tacaacccgtcgagtccgtactcgtcgaccaaggccgcctccgacatgctggtgcgagcc
tgggtgcgctcctacgacgtgtgtgcgacgatttcgaactgctccaacaactatgggccg
tatcagcacgtggagaagttcattccccgccagatcaccaacgtgctgaccgggcggcgg
ccgaagctgtacggcaaaggcgccaacgtcagagactgggtccacgtcgaggaccacaac
gatgcggtccggcgaatccttaccagcggccaagccggccgaacctacttgatcggcgcc
gagggcgagcgcgacaacctatcggtgttacagacgctgctgcagctgatgggccaggat
cccgacgacttcgactacgtcgtcgaccgcgccggccacgacctgcgctacgccatcgac
cccacgtcgctgtgcgacgaactaggctgggcgccaaagcataccgacttcaccgagggt
cttcgcgccaccatcgactggtaccgggacaacgagccgtggtggggtccgttgaaagct
gccgtcgagacccgttaccagcagtggggtcgctga
DBGET
integrated database retrieval system
