Candidatus Mycobacterium methanotrophicum: M5I08_21260
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Entry
M5I08_21260 CDS
T08748
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh03420
Nucleotide excision repair
mmeh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M5I08_21260
03430 Mismatch repair
M5I08_21260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmeh03400
]
M5I08_21260
Enzymes [BR:
mmeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M5I08_21260
DNA repair and recombination proteins [BR:
mmeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M5I08_21260
MMR (mismatch excision repair)
Other MMR factors
M5I08_21260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
ORC-CDC6-like
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UQX10551
LinkDB
All DBs
Position
complement(4061278..4063398)
Genome browser
AA seq
706 aa
AA seq
DB search
MPVIADSLVPLIADLDDEQREAVLAPRGPVCVLAGAGTGKTRTITHRIAALVAAGHVAAG
QVLAVTFTQRAAGEMRSRLRALGAAAQTGVGAVQALTFHAAAHRQLRYFWPRVVGDTRWE
LLESKFAVVARGASSARLQLSTDDVRDVAGEIEWAKASLISPEQYPDAVAAAGRDIPLDA
AKVATVYAAYESLKSRGGGVQDVALLDFDDLLLHTAAAIEDDAAIAEEFRDRYRCFVVDE
YQDVTPLQQRVLSAWLGDRDDLTVVGDANQTIYSFTGASPRYLLDFSRRFPEATVVRLER
DYRSTPQVVSLANRVIAAARGRVAGSKLQLVGQRDPGPVPTFGEHSDEVAEAAAVAASTS
RLVESGTPPAEIAVLYRINAQSEVYEEALTEAGIAYQVRGGEGFFSRQEIRQALLVLQRA
ANRGAEADAPLPDIVRGLLEPLGLTAEPPTGTRAQERWEALSALAELVDEEVAHRQQLDL
PDLLTELRARADARHPPPAQGVTLASLHAAKGLEWDAVFLVGLTDGTLPISHALAHGAES
EAVEEERRLLYVGITRARTHLALSWSLSRNPGGRQTRKPSRFLNGLDPQTQSDRNPNRPR
RSRGTTSNCRICNNQLTTPAAIMLRRCETCAADIDDELLLALKDWRLRTAKEMKVPAYVV
FTDNTLIAIAELLPTDDAALVAIPGIGARKLEQFGPDVLELVRSRV
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgatcgcggactccttagtcccactgattgccgacctcgacgacgagcagcgc
gaggcggtgttggctccgcgcgggccggtctgcgtgctggccggggcgggaaccgggaag
acccggaccatcacccaccgcatcgcggcgctcgtcgccgccggccatgtggccgcgggc
caggtgttggcggtgacgttcacccagcgggcagccggagagatgcggtcccggctgcgg
gcattgggtgccgcggcgcaaaccggtgtcggcgcggtgcaggctttgacgtttcacgcg
gcggcccaccggcagctgcggtacttctggccgcgagtcgtcggtgacacccgctgggaa
ttgctggagagcaagttcgccgtcgtcgcccgcggcgcaagcagcgcccggttgcagctg
agcaccgacgacgtgcgcgacgtggccggcgaaatcgagtgggccaaggcgtcgctgatc
tcccccgagcagtatcccgacgcggtcgctgccgccggccgcgacattccgttggacgcc
gcaaaggtcgccacggtgtatgccgcctacgagtcgctgaaatcccgcggcggtggtgtc
caagacgtcgcgctgctcgacttcgacgacctgttgctgcacaccgcggccgcgatcgaa
gacgacgccgcgatcgccgaggagttccgcgaccgctaccgctgcttcgtggtcgacgaa
taccaggacgtgacgccgctgcagcagcgggtgctgtcggcgtggctgggggatcgcgac
gacctgaccgtggtcggcgacgccaaccaaaccatctactcgttcaccggggcctcaccg
cggtacctgctcgacttctcgcggcggtttccggaggcgacggtggtgcgcctcgaacgg
gactaccgatcgaccccgcaggtggtgtcgctggccaaccgggtgatcgccgccgcccgc
ggccgggtggccggcagcaagctgcagctggtcggccagcgtgacccgggaccggtcccg
acgtttggtgaacattccgacgaagtcgccgaagccgcggcggtggcggcgtcgacatcc
cggctcgtcgagtccggcacgccgccggccgagatcgccgtgctgtaccggatcaacgcg
cagtccgaggtttacgaagaagcgctgaccgaagccggtattgcctatcaggtccgcggc
ggggagggctttttcagccgccaagagatccgccaggccctgctggtcctacaacgggcc
gccaaccgcggcgccgaagccgacgccccgctacccgacattgtgcgggggctgctcgaa
ccgctcggtttgacggccgaaccgccgaccggaacccgggcccaagagcggtgggaggcg
ctttcggcgttggccgagctggtcgacgaagaggtggcgcaccgccagcagctggacctg
cccgatctactgaccgaactgcgcgcccgcgccgacgcgcgtcacccgccgcctgcgcag
ggtgtcacgctggcctccctgcacgccgccaaagggctggagtgggatgcggttttcctg
gtcggcctgaccgatggcacgctgccgatctcgcatgcattggcccacggcgccgaaagc
gaagctgtcgaagaagagcgtcgactgctctacgtcggaatcaccagggcccgaacgcat
ttggcgctcagctggtcgttgtcccgcaacccgggtggtcgccagacacgcaagccgtcc
aggttcctcaacggtcttgacccgcagactcagtccgaccgcaacccgaaccggccacgg
cgtagccgcggcacaacgtcgaactgccgcatctgcaacaaccagctgaccacgccggcg
gcgatcatgctgcgccgctgcgaaacctgcgccgctgacatcgacgacgagctgctgcta
gcgctcaaagattggcggctgcgcaccgccaaggagatgaaagtgcccgcatatgttgtg
ttcacagacaacacactgatcgcgatcgccgagctactgcccaccgacgacgccgcgttg
gtcgcgatcccgggtatcggcgctcgcaagctggagcagttcggtccggacgtattggag
ctggttcgcagccgcgtctag
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