Candidatus Mycobacterium methanotrophicum: M5I08_21640
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Entry
M5I08_21640 CDS
T08748
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmeh03400
]
M5I08_21640 (radA)
DNA repair and recombination proteins [BR:
mmeh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M5I08_21640 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
DnaB_C
Zn_ribbon_LapB
ChlI
Lon_C
NACHT
AAA
AAA_16
AAA_22
DUF7125
AAA_30
nSTAND3
Rad51
NTPase_1
ABC_tran
AAA_29
RecA
SLFN-g3_helicase
AAA_24
RsgA_GTPase
MCM
AAA_5
NPHP3_N
AAA_14
DUF7129
AAA_19
DAP3
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
UQX10600
LinkDB
All DBs
Position
4139213..4140613
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AA seq
466 aa
AA seq
DB search
MAKARSQYRCSECRHVTAKWVGRCLECGAWGSVDEVAVLGAVRNGARQSATSSAAVPISS
IEPRDTRHCPTGIDELDRVLGGGVVPGSVTLLAGDPGVGKSTLLLKVAHQWAQSGQRALY
ISGEESPGQIRMRADRTGCSHRELYLAAESDLQAVLGHIDAVQPTLVVVDSVQTMSSTDT
DGVSGGVTQVRAVTAALTAAAKTTGVPLIIVGHVTKDGAIAGPRSLEHLVDVVLHFEGDR
NSLLRMVRGVKNRFGAADEVGCFLLQDNGIEGVVDPSGLFLDQRPQPVAGTAITVSLDGT
RPLIGEVQALLAAPSGGSPRRAVSGIDHARAAMIAAVLEKHARLKIAVNDVYLSTVGGMR
LTDPSSDLAVAIALASAYVNLPLPATAVMIGEVGLAGDLRRVSGMERRLAEAARQGFTTA
LIPPGCDVAPTGVRALEAATIVAALEHLLDIAEHHATVTGTDTLAG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaggcacgttcgcagtaccgctgttcggaatgtcgccatgtcaccgccaagtgg
gtaggacgctgcctggagtgcggcgcctgggggtcggtcgacgaggtcgcggtactcggc
gctgtccgaaacggcgcccgccagtcggccacctcgtcggccgcggttccgatcagctcc
atcgaaccccgtgacacccgccattgccccactgggatcgatgagctcgaccgagtgctg
ggcggcggcgtggtgccgggctcggtcaccctgctggcaggcgatcccggcgtcggcaag
tcgacgctgctgctcaaggtcgcccatcaatgggcacagtcagggcagcgcgcgctgtat
atctccggcgaggagtcgccgggccaaatccggatgcgcgccgaccggaccggctgcagc
catcgcgagctctacctggccgccgagtccgacctgcaggcggtgctgggtcacatcgac
gcggtgcaacccacgctggtcgtcgtggactcggtgcagaccatgtccagcactgacacc
gacggcgtcagcggcggtgtcacccaggtgcgcgcagtgaccgcggcgctgaccgcggca
gcgaagaccaccggtgtgccgctgatcatcgtcggccatgtcaccaaggacggggccatc
gccgggccgcgctcactggaacacctggtggacgtcgtgctgcatttcgaaggtgaccgc
aactcgctgctgcggatggtccgcggtgtgaagaatcgattcggagcggccgatgaagtc
ggttgttttctcttgcaggacaacggaatcgagggtgttgtcgatccatccgggctattt
ctcgatcagcggccgcagcccgtcgcgggcaccgccatcacggtgagccttgacggtacg
cgaccattgatcggcgaagtccaggcgctgctggcagctccctcgggcggctcgcctcgc
cgggccgtcagcgggatcgaccacgcccgggccgcgatgatcgccgcggtgctggaaaag
cacgctcgcctcaagatcgcggtcaacgacgtctacctgtccaccgtgggcggtatgcgg
ctgaccgatccgtcatcggacctggcagttgcgatcgcactggcttcggcctacgtcaac
ctgccgttgccggccacggcggtgatgatcggtgaagtcggtttggcgggcgatctgcga
cgggtcagcggcatggaacgacggctcgccgaagccgcccggcaggggttcaccaccgcg
ctgatcccgccgggctgcgatgtggcgccgacgggcgtgcgggcgctggaggcggccacc
atcgtcgcagcgctagagcacctgctcgacatcgccgagcaccacgccaccgtaaccggc
accgacacgttggctggatag
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