Mesorhizobium mediterraneum: LRP31_01410
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Entry
LRP31_01410 CDS
T09205
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mmei
Mesorhizobium mediterraneum
Brite
KEGG Orthology (KO) [BR:
mmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmei03032
]
LRP31_01410 (gyrB)
03400 DNA repair and recombination proteins [BR:
mmei03400
]
LRP31_01410 (gyrB)
Enzymes [BR:
mmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LRP31_01410 (gyrB)
DNA replication proteins [BR:
mmei03032
]
Prokaryotic type
DNA Topoisomerases
LRP31_01410 (gyrB)
DNA repair and recombination proteins [BR:
mmei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LRP31_01410 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WIW53941
LinkDB
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Position
306800..309271
Genome browser
AA seq
823 aa
AA seq
DB search
MSDQIDNASGAEAEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADLVTVTLNPDGSVTVIDNGRGIPTDIHTGEGISAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSAWLKLKIRRNGQIYEMSFTHGNADAPLRVTGSYEQRKVAGTYE
GRSGSEITFFPSSETFTMVEFDFGTLEHRLRELAFLNSGVRIVLTDARHADVVRHELHYD
GGLEEFVKYLDRVKKPLIDKPIAIKAERDGITVEVAMWWNDSYHENVLAFTNNIPQRDGG
THLAGFRGALTRQITGYGDSSGLTKKEKVALIGDDCREGLTAVLSVKVPDPKFSSQTKDK
LVSSEVRPVVEGLVNEALGTWLEEHPAEGKVVIDKVIQAAAAREAARKARDITRKSSLGV
TSLPGKLADCQERDPAKSEIFIVEGDSAGGSAKGGRSRQNQAILPLRGKILNVERARFDR
MLGSDMIGTLITALGTSIGKDEFNADKLRYHKIILMTDADVDGAHIRTLLLTFFFRQMPE
LIERGHLYIAQPPLYKVTRGKSSQYIKDESAFEEFLIGSGLEEASLALSTGEVRAGQDLR
SAIDDALAVRQLINGLHTRYNRGVVEQAAIAGGLNPEVFADLGRANAMAERVARRLDIIA
EDTERGWTGRMSTSNEGIGGYVFERTVRSVKEFAHLDLALINSADARQLDRYAPRLAEVY
GEPPVLRRKDVAETISGPLALLNAVFATGRKGLTMQRYKGLGEMNAEQLWETTLDPNVRS
LLQVKVNDATDADSLFSRLMGDEVEPRREFIQENALSVANLDI
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcagatcgacaacgccagcggcgctgaggccgagtacggcgccgattccatc
aaggttttgaagggcttggacgccgtccgcaagcggccgggcatgtatatcggcgatacc
gacgatggctcgggcctgcatcacatggtctacgaggtggtcgacaacgccatcgacgag
gcgctggccggccatgccgatctcgtcacggtgacgctcaaccccgacggttcggtgacg
gtcatcgacaatggccgcggcattccgaccgatattcacaccggcgaaggcatttcggcg
gcggaagtgatcatgacccagctgcatgccggcggcaagttcgaccagaactcctacaaa
gtgtccggcggcctgcacggcgtcggcgtctcggtggtcaacgcgctgtcggcctggctg
aagctgaagatccgccgcaatggccagatttacgagatgagcttcacacacggcaatgcc
gacgcgccactgagggtcaccggcagctacgagcagcgcaaggttgccggcacctatgag
gggcgcagcggcagcgagatcacctttttcccgtcgtccgaaacctttaccatggtcgaa
ttcgacttcggcacgctggagcatcggctgcgcgaactcgccttcctgaattccggcgtg
cgcatcgttctgaccgatgcccgccatgccgacgtcgtgcgccatgagctgcactatgat
ggcggactggaggagttcgtcaaatatctcgaccgcgtgaagaaaccgctgatcgacaag
ccgattgcgatcaaggccgagcgcgacggcatcaccgtcgaagtcgccatgtggtggaac
gacagctaccacgagaacgtgctggccttcaccaacaacattccgcagcgcgacggcggc
acgcatcttgccggtttccgcggcgcgctgacgcgccagataaccggctacggcgactcc
tcgggcctcactaagaaggagaaggtagcgctgatcggcgacgattgccgcgaagggctg
acggcggtgctgtcggtcaaggttcccgacccgaaattctcctcgcagaccaaggacaag
ctggtctcgtccgaagtccgcccggtggtggaagggctcgtcaacgaggcgctcggcacc
tggctcgaagagcatcctgccgagggcaaggtcgtcatcgacaaggtcatccaggcggca
gcggcgcgcgaagccgcgcgcaaggcgcgcgacatcacccgcaagagctcgctcggcgtc
acctcgctgcccggcaagctggccgactgccaggaacgcgacccggcgaagtccgaaatc
ttcatcgtcgagggcgacagcgccggcggctcggccaagggcggccgttcccgccagaat
caggccattcttccgctgcgcggcaagatcctcaatgtcgagcgggcccgcttcgaccgc
atgctcggctccgacatgatcggcacgctgatcaccgcgctcggcacctcgatcggcaag
gacgaattcaacgccgacaagctgcgttaccacaagatcatcctgatgaccgacgccgac
gtcgacggcgcccacatccgcaccttgctgctgacgttcttcttccggcagatgccggag
ctgatcgagcgcggccatctctatatcgcgcagccgccgctctacaaggtgacgcgcgga
aagagctcgcaatacatcaaggatgaaagcgccttcgaggaattcctgatcggctcgggg
ctggaagaggcgtcgcttgcgctcagcaccggcgaggtgcgggccggacaggacctgcgc
agcgccatcgacgatgcgctggcggtgcgccagctcatcaatgggctgcacacacgctat
aacagaggcgtggtcgagcaggcggcgatcgcgggcgggctcaacccggaggttttcgcc
gatctcggccgggccaacgccatggccgagcgtgtcgcccggcgtctcgacatcatcgcc
gaggacaccgaacgcggctggaccggccgcatgtcgacctcgaacgaaggcatcggcggc
tatgtgttcgagcgcacggtgcgcagcgtcaaggagttcgcgcatctcgatctcgcgctg
atcaattcggccgatgcccgccagctcgaccgctatgcgccgcgcctggcagaggtctat
ggcgagccgccggtgctgcgccgcaaggatgtggccgaaaccatctcgggaccgctggca
ctgctcaacgccgtgtttgccaccggacgcaagggcctgaccatgcagcgctacaagggc
ctcggcgagatgaacgccgagcagctctgggaaaccacgctcgacccgaatgtgcgctcg
ctgctgcaggtcaaggtcaatgacgcgacggacgccgactcgctgttttcgcgactgatg
ggggacgaggtcgaacccaggcgcgagttcatccaggaaaacgcgctgtcggtcgctaat
ctggatatctga
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