Mesorhizobium mediterraneum: LRP31_02000
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Entry
LRP31_02000 CDS
T09205
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
mmei
Mesorhizobium mediterraneum
Brite
KEGG Orthology (KO) [BR:
mmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmei03400
]
LRP31_02000 (addA)
Enzymes [BR:
mmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LRP31_02000 (addA)
DNA repair and recombination proteins [BR:
mmei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LRP31_02000 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
DEAD
AAA_30
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WIW54051
LinkDB
All DBs
Position
complement(433871..437383)
Genome browser
AA seq
1170 aa
AA seq
DB search
MKKAYPIPTDTAASQASASDPKNSAWVSANAGSGKTHVLAQRVIRLLLRGTDPSKILCLT
YTRAAATNMSNRVFSTLSEWTALADVDLAARVEALDGRQPDRETMRRARRLFAEALETPG
GLKIQTIHAFCESVLHQFPLEANIPAHFEMLDPQMEASLFAAARRDMISGTAAGDAGLAE
AFATILERGGEHGLDALLAEIVRKRDGLRAFISAAGGDGFRALFDEFRFRAGQTAEGLAA
SVWPLPGFLPDYFITFARAAEAADARIVLNILLPYARLAFAEDDPVRRLHLLAKAFLRAD
GEPYEPAKTFKKALLDRLPDLAERYLSAADAILEISDRLALFRMLEGTRAALTIADWLIA
RYEHLKRARGFLDFNDLITRTVNLLARPDAGPWVQYKLDQGIDHILLDEAQDTSPDQWEV
VKRLAEEFFAGLGARDNVHRTVFAVGDEKQSIYSFQGAAPDSFADSRILFAGRVRDANAA
FADLKLTWSFRSTDDVLAAVDRVFADPIVRRGISHDPDPLDHKAIRTDAPGYVEVWPSIG
ADVVDEPDDWTQAVDHAHAPAVRVAENVAATIAGWIGTGEIIEGRGKKLRPGDVLVLVRK
RDRFVHALTRALKRRDIPVAGADRLSLPGHIAVKDLIALGHFLIQPEDDLSLAAVLRSPI
FDVSEEMLFALAGERPSGLSLIASLRQQAGESAALAAIVAQLDTWSDEAAFKPVFEFYAG
ALARDGLRKKMIARLGPEAGDILDEFLSFCLAGERTGLPGLESFLSTLENAGPEIKREMD
QTRDEVRVMTVHAAKGLEAPVVFLVDGGSAPFSDQHLPRLMPFDGSGEHWGGKGYLWRSA
SDVANGFSRAASVRARELSDDEYRRLLYVGMTRAEDRLIVCGYHGKRAPNAGTWHSIVSR
ALVGAPESDERLHPATGETVHRFHVTKLPPVAQAAAEEARQTQQFEPLPKTLFQPLPPFE
DLPRPLSPSGASALIDEAKEAVIDTGSPVLDTEAEPGFAVMRGLALHKLLQMLPGIAEAE
RRDAAERYLKRVGAQWPEGERDKALTSVAAILADSRFDQLFASSSRAEVAVMGSLEVKGK
LRSISGKIDRLAVTSGKVSIVDYKTNRPAPAALADVPPAYVLQLALYRALLQPLYPRHEV
SAALLFTEVPRLIELPPAVMDDALARLTGA
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggcctatcccatcccgaccgataccgccgccagccaggcaagcgcctccgac
ccgaaaaattccgcctgggtgtcggccaatgccggatcgggcaagacccatgtgctggcc
cagcgcgtcatcaggctcttgctgcgtggcaccgatccatcgaagatcctgtgcctgacc
tacacccgtgccgccgccaccaacatgtcgaaccgggtgttttcgacgttgtcggaatgg
actgcgcttgccgacgtcgatctggcggcgagggtagaggcgctggacggtcgccagccc
gatcgcgaaaccatgcgccgcgcgcgccggctgttcgccgaggcgctggagacgccgggc
gggctgaagatccagaccatccacgccttctgcgaatcggtgctgcaccagttcccgctg
gaagccaacattccggcccatttcgaaatgctcgatccgcagatggaggcgtcgctcttc
gccgccgcccgtcgtgacatgatctcgggcacggccgccggcgatgcgggactggcagag
gcattcgccaccattctggagcgcggcggcgaacatgggctcgacgcattgctggccgag
atcgtgcgcaagcgcgacggcttgcgcgccttcatcagcgcggccggtggcgatggcttc
cgggcgctgttcgacgagttcaggtttcgcgccggccagaccgccgaaggcctggcggcc
tccgtctggccgctgccgggcttcctgccggactatttcatcacctttgcccgcgctgcc
gaagccgccgatgcccgcatcgtgctgaacattcttctgccctatgcgcgtcttgccttc
gccgaggatgatccggttcgccggctgcatctgctggcaaaagctttcctgcgagcggat
ggcgagccttatgagccggcaaagacattcaagaaggcgttgctcgaccggctgcccgat
cttgccgagcgctatctctcagctgccgatgcgatcctcgaaatctccgatcgattggcc
ttgttcaggatgctggagggcacacgtgccgcgctgaccatcgccgactggctcatcgcc
cgctacgagcacttgaagcgcgcccgcggctttctggacttcaacgacctcatcacccga
acggttaatcttctggcgcggcccgacgccggcccttgggtgcaatacaagctcgaccag
ggcatcgaccacatcctgctcgacgaggcgcaggacacaagccccgaccaatgggaggtg
gttaagcggctggcggaggaattctttgccgggctcggcgcgcgcgacaatgttcatcgc
acggtctttgccgtcggcgacgaaaagcagtcgatctattcctttcaaggagcggcgccc
gactcctttgccgactcaaggatcctgtttgccggaagggtgcgcgacgccaacgccgcc
ttcgccgatctcaagctgacctggtcgttccgctcgaccgacgacgtgcttgcggcggtg
gaccgtgtctttgccgacccgatcgtgcggcgcggcatcagccacgatcccgacccgctc
gaccacaaggcgatccgcaccgatgcgccgggttatgtcgaggtctggccgtcgatcggc
gccgatgtcgtcgacgaacccgacgactggacgcaagccgtcgaccacgcccatgcgccg
gcggtgcgtgttgccgagaacgtggcggcgaccattgctggctggatcggcaccggcgag
atcatcgaaggccgtggcaagaagcttcgccccggcgacgtgctggtgctggtgcgcaag
cgcgatcgctttgtccatgcgctgacgcgtgcgctgaagcgccgcgacatcccggtcgcc
ggcgccgaccggctcagcctgcccggccatatcgcggtgaaggacctgatcgcgctcggc
cactttctcatccagcccgaggatgatctgtcgcttgcggcagtgctgcgcagcccgatt
ttcgatgtttcggaagagatgcttttcgcgctggcgggcgagcggccgtctggtctctcg
ctgatcgcttcgctcaggcagcaagccggcgaaagcgctgccttggccgcaatcgttgcc
caactcgacacatggtctgatgaagccgcattcaagccggtgttcgaattctatgccggg
gctctcgcccgcgacggcctgcgcaagaagatgatcgcgcggctcgggccggaggccggc
gacatcctcgacgagtttctaagcttttgcctggccggggaacggaccggcctgccggga
ctggaatccttcctgtcgacgctggaaaatgccggccccgagatcaagcgcgaaatggac
cagacccgcgacgaggttcgcgtcatgaccgtgcatgccgccaagggcctggaggcgcct
gtcgtgttcctggtcgatggcggctcggcgccgttcagcgaccagcatctgccgcgactg
atgccgttcgatggctcgggcgagcactggggtggcaagggctatctctggcgctcggcc
agcgatgtcgccaatggattctcgcgggccgcttcggttcgcgctcgcgagctgtccgac
gacgaataccgtcggctgctctatgtcggcatgacccgcgccgaggaccggctgatcgtc
tgcggctaccatggcaagcgggcaccgaacgccggtacctggcattcgatcgtcagccgc
gcgctggtcggcgcccccgaaagcgatgagcgactgcaccccgccaccggcgagaccgtg
catcggtttcacgtgacaaaattgccgccggtcgcacaggcggcggccgaagaggcgcgg
cagacgcaacagttcgagccgttgccgaagaccctgttccagcccttgccgcctttcgag
gatctgccgcgaccgctgtcgccctccggcgcctcggccctgatcgatgaggccaaggaa
gccgtaatcgacaccggctcgccggtgctggacaccgaggcggaacctggctttgccgtg
atgcgagggctggcgctgcacaaattgttgcagatgctgcccggcattgccgaggccgaa
cgccgggatgccgcggaacgctatctcaagcgcgttggcgcgcaatggcctgaaggcgag
cgcgacaaggccttgacctcggtggcggcgatccttgccgacagccgcttcgatcagttg
tttgcatcatcgtcgcgcgccgaagtcgcggtcatgggcagcctggaggtcaagggcaag
ctgcgttccatctccggcaagatcgaccggctggcggtcacatcaggcaaggtgtcgatc
gtcgattacaagaccaaccggccggcgccagcagcgctggcggacgttccaccggcctat
gtcctgcagctcgcgctctaccgcgcgctgctccagccgctttacccccggcatgaggtc
tcggcggctctgctgttcactgaagtgccgcggctgatcgagctgccgccggcggtcatg
gacgacgctcttgcccgactcacgggagcgtga
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