Mesorhizobium mediterraneum: LRP31_02005
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Entry
LRP31_02005 CDS
T09205
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mmei
Mesorhizobium mediterraneum
Brite
KEGG Orthology (KO) [BR:
mmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmei03400
]
LRP31_02005 (addB)
Enzymes [BR:
mmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LRP31_02005 (addB)
DNA repair and recombination proteins [BR:
mmei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LRP31_02005 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WIW54052
LinkDB
All DBs
Position
complement(437380..440499)
Genome browser
AA seq
1039 aa
AA seq
DB search
MSGSRRVFSIPPGAPFLPTLAEALLSGRLVPGFRFDGDPLALADATIYVPTRRAARALRG
VFVDRLGGRSAILPVIRPLGEFDEDEAAFEADASAAIDLAPPIAAIERLLLLAPLVRAWK
RRLPAHVAALFDEEIVVPASAADAIWLARDLARLMDEIETEGTDWTRLADLVTGNLAGWW
QVTLDFLSIVTENWPDLLEERNRSNPAAHRNALIRLEAARLKRNPPTGPVIAAGSTGSIP
ATAELLAVIAGLPSGAVVLPGLDLMLDEPSFQAIAAPGARPALLGHPQYGLAKLVGKIGV
LRGDVEEIAVAERPLALRAALVGEALRPAETTELWAQTRAGFAAADITDAFADVTLLEAA
GERDEAVAIAVALKRAVEQPGQRAALVTGDRALARRVSVELLRFGVVADDSGGTPLINTP
AASLLRLALQAAFRPGDPVALLSLLKHPLLGLGLERTSVRHAAEIIELVALRGGTGRPDI
ASLPELFDIRLTGLGDARPPFWFSRLTVRNIEGARKLLIRLAAALAPLIAFRNQAEADLA
ELTRASVVTLEGLGRTADGSLSELYAGDAGEKLAELLRGLVAASASFSFAADESPDVMEA
LIAPETVKPAQGTDRNIAIWGALEARLQSVDTLVVGGLNEGVWPRKPESDRFMSRLMKTG
IDLDPPERRIGLAAHDFQMAMGAKKVVLARSARSGDAPAVPSRWLQRLLTFIGKDHAAVL
RRRGDEFLSWARALDAGERRDFAPRPQPQPPLAERPQHFSVTEIETLRRDPYAIYARRIL
RLMPLDPVIRDPGAAERGTLFHAILHLFSAKVADPLVPEALDGLIVAGRQCFAEAALPND
VEAVWWPRFEKLAAGIIEWERGRALAVTMRHAEERAEKTGVGRSGVTLSGYADRVDLLAG
GMADILDYKTGSSPSKAQAHTLLSPQLALEGALLRRGAFKGLGAREPSQLAFVRLKPNGE
VFEESILEYNRKPRTAADLAEEAWARLEKLLIHYADPTTGYLSRALPFREGETDGDYDHL
ARVLEWSAGGDADDEGGEA
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctcccgccgcgttttctcgatcccgcccggagcgccgtttctgccgacgctg
gccgaggccctgctgtcggggcggcttgttcccggtttccgcttcgacggcgacccgctg
gcgctggccgacgccaccatctacgtgccgacgcgccgcgccgcgcgggcgctgcgcggc
gtcttcgtcgaccgtctgggtggccgctcggcgatcctgccggtcatccgtccgcttggc
gagttcgacgaggacgaagctgcattcgaggccgacgcatcggcggcgatcgatctcgcg
ccgccgatcgcggcgatcgagcggctgctgctgctggcaccgctggtgcgcgcctggaag
cgccgcttgcctgcccatgtcgcggcacttttcgatgaggagatcgttgtgccggcctcc
gccgccgacgccatctggctggcgcgcgacctggcccggctgatggacgagatcgagacc
gaaggcacagactggaccaggctcgccgatctggtcaccggcaaccttgccggctggtgg
caagtgacactcgacttcctgagcatcgtcaccgaaaactggccggatctcctcgaggaa
cgcaaccgctccaaccccgccgcgcatcgcaatgcgctgataaggctggaagcggcgcgg
ctgaagcgcaatccgcccactgggccggtgatcgcagccggctccaccgggtcgattccg
gccaccgccgaattgcttgcggtgatcgccggcctgcccagcggcgccgtcgtgctgccc
ggcctcgatttgatgctggatgagccgtcattccaggcaatcgcggcgcccggggcgcgc
ccggccttgcttggccatccgcaatacggcctggcaaaactggtcggcaagatcggcgtg
ctgcgcggcgatgtcgaggaaatcgccgttgccgaaaggccgctcgcgctgcgcgccgca
cttgtcggcgaggcgctgcggccggccgaaaccactgagctatgggcgcagacgcgcgct
ggctttgccgccgcggacatcactgatgccttcgccgacgtgacgcttctcgaagccgcc
ggcgaacgcgacgaagcggtggcgatcgccgtcgcgctcaaacgtgccgtcgagcagccc
ggccagcgtgcggcgctcgtcaccggcgaccgcgccctggcgcggcgcgtctcggtcgag
ctgttgcggtttggggtcgtggccgacgattcgggcggcacgccgctcatcaacacgcca
gccgccagtctgctcaggctggcgcttcaggccgcgttccggcccggcgatccggtcgcc
ctgctgtcgctgctcaagcacccgctgcttggcctcggcctggaacgcacaagcgtccgt
catgcggcggagatcatcgaactggtggcgctgcgtggcggcaccggccgccccgacatt
gcatcgttgccggagctcttcgacatacgtctcaccggcctgggcgatgcccgcccgccc
ttctggttttcccgcctgaccgtgcgcaacatcgagggcgcccgcaaattgctcatccgc
ctagccgcggcgctggcgccgctgatcgcctttcgcaatcaagccgaggccgatcttgcc
gaattgacccgggccagcgtcgtcacgctcgaaggtctcggccgcaccgcggatggcagc
ctgagcgaactctatgcgggcgatgccggtgagaagctcgccgagctcttgcgcgggctg
gtcgccgcctcggcgtcgttctccttcgcggcggacgaatcgcccgatgtgatggaggcg
ctgatcgcgcccgaaaccgtcaagccggcacaaggcaccgacaggaacatcgccatctgg
ggcgcgttggaagcccggttgcagagcgtcgacacgctggtcgtcggcgggctcaatgaa
ggcgtgtggccgcgcaagccggagagcgaccgcttcatgtcgcggctgatgaagaccggc
atcgatctcgacccgcccgaacggcgcatcggcctggccgcccatgatttccagatggcg
atgggggcgaagaaagtggtgctggcgcgctccgcccgctcgggcgacgcgccggcggtg
ccgtcgcgctggctgcagcgcctcctgaccttcatcggcaaggaccatgcggcagtgctg
cgccggcgtggtgatgaattcctttcctgggcacgtgcgctcgatgccggcgaaaggaga
gatttcgcgccgcgaccgcagccgcagccgccgctggctgagcggccgcagcatttctcg
gtcaccgagatcgagacgctgcgccgcgacccttacgcgatctatgccaggaggatcctg
cgcctgatgccgctcgacccggtcatccgcgacccgggtgctgccgagcgcggcacgctg
tttcacgccatcctgcatcttttctcggcgaaggtggccgatccgcttgtgccggaggcg
cttgacggtctcatcgtcgccggccgccaatgctttgccgaagcggcccttcctaacgat
gtcgaggcggtatggtggccgcgcttcgaaaagcttgcggccgggatcatcgaatgggag
cgcggccgcgcccttgccgtgacaatgcggcacgccgaggagcgcgccgagaaaaccggc
gttggccggtccggcgtgacgctgtccggctacgctgatcgcgtcgacctgctggccggc
ggcatggccgacattctcgactacaagaccggctcctcgccgtccaaggcgcaggcgcac
acgctgctgtcgccacaattggcgctggaaggggcattgctgaggcgcggggccttcaag
gggcttggcgcgcgcgagccgtcgcaactggccttcgtcaggctgaagccgaacggcgag
gtattcgaggaatccatcctcgaatacaaccgcaagccgcgaaccgccgccgatctcgcc
gaggaggcctgggcgcggttggaaaaactgctgatccattacgccgacccgacgaccggc
tatttgtcgcgggcgctgccatttcgcgagggcgagaccgatggcgactacgaccatctc
gcccgcgttctcgaatggtccgccggcggcgacgccgacgacgaaggaggggaggcatga
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