Mesorhizobium mediterraneum: LRP31_12030
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Entry
LRP31_12030 CDS
T09205
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmei
Mesorhizobium mediterraneum
Brite
KEGG Orthology (KO) [BR:
mmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmei03032
]
LRP31_12030
03400 DNA repair and recombination proteins [BR:
mmei03400
]
LRP31_12030
Enzymes [BR:
mmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LRP31_12030
DNA replication proteins [BR:
mmei03032
]
Prokaryotic type
DNA Topoisomerases
LRP31_12030
DNA repair and recombination proteins [BR:
mmei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LRP31_12030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WIW55825
LinkDB
All DBs
Position
2502691..2503791
Genome browser
AA seq
366 aa
AA seq
DB search
MLDKSGSSPGRSASRKVAPGAPTNGSQASADRASLTYITDAEPGIRRLRVGKGFSYKGPD
GQGVDEDTLARIKALAIPPAWTDVWISPVADGHIQATGRDQRGRKQYRYHALWAEERDGV
KYSSLVAFAEILPELRRQIDADLRRHGLPLERVVAAVVWLLDNTMIRVGNSAYARDNNSF
GLTTLRDRHVDINGSSLRFAFKGKSGKEWKLKLADRRIARIVRGAQDLPGQKLFQYLDED
GSRRPIRSDDVNRYIREMAGADFSSKHFRTWGGTIHAASLFAQTERPESQAQQKRVMNGL
IDKVAERLGNTRAICRRCYIHPQVFDAWSEGRLLTEIADANKRKRSIPGLDDEEALVLRW
LKAQES
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgctggacaaatccgggtcgtcgcctggccggtcggctagcaggaaggttgctccaggg
gcgccgacaaatgggtcgcaagcctctgccgatcgagcctcactcacctacatcactgac
gccgagcccggtatccgccgtctgagggttggcaagggattttcatacaaagggcctgac
gggcagggcgtcgacgaggacactttggcccgcatcaaggcgctcgccattccaccggcg
tggacagatgtgtggatttcgcccgttgctgacggtcacatacaggcgaccggccgggac
cagcgcggacgcaagcaatatcgctaccatgcgctatgggcggaggagcgtgacggcgtc
aaatattcgagcctggttgcctttgcagaaatcctgcccgagctgcgacgccagatcgat
gccgatctgcgccgtcacggcctgccgctggagcgggttgtcgccgctgtggtctggctg
ctcgacaatacgatgatccgcgtcggcaattccgcctacgctcgcgacaacaacagcttt
gggctgaccacgctgcgcgaccgtcatgtcgacatcaatggctcgagcctgcgtttcgct
ttcaaaggcaagtccggcaaggaatggaagctaaagctcgccgatcgccggatcgccagg
atcgtgcgcggggcccaggatctgccgggccagaagctgttccagtatctcgacgaggac
ggaagcaggcgaccgatccgctccgacgacgtcaaccgctacatcagggagatggcaggg
gccgatttcagctccaagcatttccgaacctggggcggcaccatccatgctgcgtcgctg
tttgcgcaaaccgaacgacccgaaagccaggcacaacagaagcgggtgatgaacggcctc
atcgacaaggtcgccgagcggctgggcaacacgcgcgccatctgccgcagatgctatatc
cacccgcaagttttcgatgcctggtccgaaggacggctgctcaccgaaatagcggatgcg
aacaagcggaaacgatcgatacccggtctcgatgacgaagaggctctcgtactgagatgg
ctgaaggcgcaggaaagctga
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