Mesorhizobium mediterraneum: LRP31_19610
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Entry
LRP31_19610 CDS
T09205
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmei
Mesorhizobium mediterraneum
Brite
KEGG Orthology (KO) [BR:
mmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmei03032
]
LRP31_19610 (topA)
03400 DNA repair and recombination proteins [BR:
mmei03400
]
LRP31_19610 (topA)
Enzymes [BR:
mmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LRP31_19610 (topA)
DNA replication proteins [BR:
mmei03032
]
Prokaryotic type
DNA Topoisomerases
LRP31_19610 (topA)
DNA repair and recombination proteins [BR:
mmei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LRP31_19610 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
WIW51291
LinkDB
All DBs
Position
complement(4040564..4043191)
Genome browser
AA seq
875 aa
AA seq
DB search
MDVVVVESPAKAKTINKYLGKNYKVLASFGHVRDLPAKDGSVRPDEDFAMSWAVDTASSK
RLADIARAVKDADGLILATDPDREGEAISWHVLEVLKQKRALKDKPVSRVVFNAITKSSV
LEAMANPRQIDAPLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIERFIREEYWQVSALLGTPRKENFEARLTAFDRKKLQKLDISNKAQADDIKAMLEGA
TFKALSVEAKPTKRNPGPPFTTSTLQQAASSRLGFSASRTMQVAQRLYEGMDIGGETTGL
ITYMRTDGVQMAPEAISAARDAIAKEFGPKYLPEKPRQYTTKAKNAQEAHEAIRPTDFMR
TPASVRQYLDADQARLYEIVWKRAIASQMQPAEIERTTAEIEAVNGARTAELRAIGSVVR
FDGFIAAYTDQKDEDSEDEEDRRLPEIRAGEQLDREAINATQHTTEPPPRYSEASLIKKL
EELGIGRPSTYTAILKTLEDRDYVSMDKRKLLPQAKGRLLSAFLESFFERYVEYDFTASL
EEKLDEISDGKLAWKDVLRDFWKDFSGAVADIKELRVTDVLDALNEELAPLVFPTREDGS
NPRICPKCGTGNLSLKLGKFGAFVGCSNYPECSFTRQLGDAANPNGENGNGEDGTKVLGK
DPYTAEEITLRSGRFGPYIQRGDGKEAKRSSLPKGWTVDSIDHEKALALLSLPRDVGKHP
ESGKMISAGLGRYGPFVLHDGTYANLDNIEDVFSIGLNRAVSVIAEKKLKGPGGRNGGTP
AALKELGEHPAGGGKIVVRDGKYGPYVNFGKVNATLPKGKDPQSVTVEDAVALIAEKEAK
GGNGGRKPFRKAAAPAKKPAAAKKPAAKKVAKKKG
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgtcgtcgtcgaatcgccggccaaagcgaagacaatcaacaagtacctcgga
aagaactacaaggtcctggcctcgtttggccacgtccgcgatctgccggccaaggatggc
tcggtgcgtccggacgaggattttgccatgtcctgggctgtcgacaccgcctcgagcaaa
cgtcttgctgacatcgccagggcggtcaaggacgccgacggcctgatcctcgccaccgat
ccggatcgcgagggcgaagccatttcctggcatgtcctggaagtgctgaagcagaagcgc
gcgctgaaggacaagccggtcagccgcgtcgtcttcaacgccatcaccaagtcatcggtg
ctggaagcgatggccaatccgcgccagatcgatgcgccgctggtcgacgcctatctcgct
cgccgcgcgctcgactatctcgtcggcttcacgctgtcgcccgtcctgtggcgcaagctg
ccgggcgcccgttccgccggccgcgtgcagtcggtggcactgcgcctcgtctgcgaccgc
gaattggagatcgagcgcttcatccgcgaggagtactggcaggtatcagctctcctcggc
acgccgcgcaaggaaaacttcgaggcgcggctgaccgccttcgaccgcaagaagctgcaa
aagctcgacatttcgaacaaggcgcaggccgatgacatcaaggcgatgctggaaggtgcg
accttcaaggcgctatcggtcgaagccaagccgaccaagcgcaatccaggcccgcccttc
accacctcgacgctgcagcaggctgcctcctcgcgtctcggtttttcggcaagccgcacc
atgcaggtggcgcagcggctctatgaaggcatggacatcggcggcgagaccaccggcctg
atcacctatatgcgaaccgacggcgtgcagatggcgcccgaggcgatatcagctgcgcgc
gatgcgatcgccaaggagttcggcccaaaatacctgcccgagaagccgcgccaatacacg
accaaggccaagaacgcccaggaagcccacgaagcgatccgcccgaccgatttcatgcgc
acccccgcttctgtcagacaatatctcgatgccgaccaggcacggctctacgagatagtg
tggaaacgtgccatcgccagccagatgcagccggccgagatcgagcgcaccacggccgag
atcgaggcagtcaacggcgctcgcaccgcggaactccgcgccatcggttcggtcgttcgc
ttcgacggcttcattgccgcctataccgaccagaaggacgaggattcggaagacgaggaa
gaccgccgtctgcccgagatccgtgccggcgaacagctcgaccgcgaggcgatcaacgcc
acccagcacaccaccgagccaccgccgcgctattcggaagcctcgctgatcaagaagctg
gaagaactcggcatcggtcgtccctcgacctacactgcgatcctgaagacgctcgaggat
cgcgactacgtcagcatggacaagcgcaagctgttgccgcaggccaagggtcggctgctg
tcggccttcctcgaaagcttcttcgagcgctatgtcgaatacgacttcaccgcctcactc
gaggaaaagctcgacgagatttccgacggcaagctcgcctggaaggatgtgctgcgcgat
ttctggaaggatttttcgggcgccgtcgccgacatcaaggaattgcgcgtcaccgacgtg
ctcgacgcgctcaacgaggaactggcgccgctcgtcttcccaacgcgggaagacggctca
aatccgcgcatctgcccgaaatgcggcaccggcaacctgtcgctgaagctcggcaagttc
ggcgcctttgtcggctgttccaactaccccgaatgctccttcacccgccagctcggcgac
gccgccaaccccaatggcgaaaacggcaatggcgaggacggcaccaaggtgcttggcaag
gacccctacacggcggaggaaatcacgctgcgcagcggtcgtttcggcccctatatccag
cgcggcgacggcaaggaagccaagcgctccagcctgcccaagggctggacggtcgattcg
atcgaccacgaaaaggccctcgccttgctgtcgctgccgcgtgacgtcggcaagcatccg
gaatccggcaagatgatctcggccgggctggggcgctacggtccgttcgtgctgcatgac
ggcacctacgccaatctcgacaacatcgaggacgtgttctcgatcggcctcaaccgcgcc
gtgtcggtgatcgccgagaagaagttgaagggccccggcggccgcaatggcggcacgccc
gccgccttgaaggaacttggcgagcatccggcgggcggcggcaagatcgtcgtgcgtgac
ggcaaatacgggccctatgttaatttcggcaaggtcaatgcgacgctaccgaagggcaag
gacccgcagtcggtgacggtcgaggatgcggtggcgctgattgccgagaaggaagccaag
ggtggcaatggcggcagaaagcccttccgcaaagcggccgcacctgccaaaaagcctgcg
gcagccaaaaaaccagcggccaagaaagtggccaagaaaaagggatag
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