Mesorhizobium mediterraneum: LRP31_21440
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Entry
LRP31_21440 CDS
T09205
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mmei
Mesorhizobium mediterraneum
Brite
KEGG Orthology (KO) [BR:
mmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmei03009
]
LRP31_21440 (rimO)
Enzymes [BR:
mmei01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LRP31_21440 (rimO)
Ribosome biogenesis [BR:
mmei03009
]
Prokaryotic type
ribosomal protein modification factors
LRP31_21440 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
WIW51625
LinkDB
All DBs
Position
complement(4420134..4421447)
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AA seq
437 aa
AA seq
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MSAPRVSFVSLGCPKALVDSERIITRLRAEGYEIARKHDGADLVVVNTCGFLDSARDESL
NAIGSALSENGRVIVTGCLGAEPDVIREKHPNVLAITGPQAYESVMAAVHEAAPPSHDPY
VDLLPPQGVKLTPRHYAYLKISEGCNNRCTFCIIPALRGDLVSRPAADVLREAEKLAKAG
VKEILVISQDTSAYGIDIKYQTSMFGDREVRAKFLDLSEELGKLGIWVRMHYVYPYPHVA
DVIPLMAEGKILPYLDIPFQHASPQVLKNMRRPAHGERTLDRIRGWREICPDLAIRSTFI
VGFPGETDDDFEMLLDWLDEAKIDRAGCFKYEPVRGARSNDLGLEQVPQEIKEARWHRFM
QRQQKISATQLARKVGKRLPVLIDEAHGTSAKGRTKYDAPEIDGSVHIQSRRPLRAGDIV
TVKIDRADAYDLYGSAV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctcgcgtcagtttcgtcagccttggatgcccgaaagccctcgtggattcg
gagcgcatcatcacgcgcctgcgcgccgaaggctatgagatcgcgcgcaagcatgacggc
gccgatctggtcgtcgtcaacacctgcggcttcctcgattcggctcgcgatgaatcgctc
aatgccatcggctccgccctatcggagaatggcagggtcatcgtcaccggttgcctcggc
gccgaaccggacgtcatccgcgaaaaacatcctaacgttctcgccatcaccggtccgcag
gcctacgagagcgtgatggctgccgtgcatgaggccgcgccgccgagccacgatccttat
gtcgaccttttgccgccgcaaggcgtcaagctcacgccgcgccactatgcctatctcaag
atttcggaaggctgcaacaatcgctgcactttctgcatcatccccgcgctgcgcggcgat
ctcgtctcgcggccggcggccgacgtgttgcgcgaagccgagaaactggccaaggccggc
gtcaaggagatcctggtcatttcgcaggacaccagcgcctatggcatcgacatcaaatac
cagaccagcatgttcggcgatcgcgaagtgcgggcaaagttcctcgatctgtcggaggaa
ctcggcaagctcggcatctgggtgcgcatgcactatgtctacccctacccgcatgttgcc
gatgtcatcccgctgatggccgaaggaaagatccttccctatctggacatcccgttccag
cacgcctcgccgcaggtgctgaagaacatgcgccggcccgcccatggtgaaaggaccctc
gatcgcattcgcggctggcgcgaaatctgtccggatctggccatccgctccacctttatc
gtcggcttccccggcgagacggacgacgatttcgaaatgctgctcgactggctggacgaa
gccaagatcgaccgcgccggctgtttcaaatacgagccggtccgaggcgcccgatccaac
gacctcggcctcgaacaggtgccgcaggagatcaaggaagcgcgttggcaccgcttcatg
cagcgccagcagaagatctcggcgacgcagctcgccaggaaggtcggcaagcgcttgcct
gtcctgattgacgaggcgcatggcacctcggccaagggccgtaccaaatacgacgcgccc
gaaatcgacggctcggtgcatatccagtcgcggcgcccgttgcgcgccggcgacatcgtc
accgtcaagatcgaccgcgccgacgcctacgatctctacggctcggccgtctga
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