Mesorhizobium mediterraneum: LRP31_24290
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Entry
LRP31_24290 CDS
T09205
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mmei
Mesorhizobium mediterraneum
Brite
KEGG Orthology (KO) [BR:
mmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmei03016
]
LRP31_24290 (rnd)
Enzymes [BR:
mmei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LRP31_24290 (rnd)
Transfer RNA biogenesis [BR:
mmei03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LRP31_24290 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
WIW52156
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All DBs
Position
4985504..4986655
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AA seq
383 aa
AA seq
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MHVITTQEELETAVAAFEKSDFVTVDTEFIRETTFWPILCLIQMAAPGVTALIDPLSPDI
DLKPFFRLMANEAVVKVFHAARQDIEIIVHLGDLVPHPVFDTQVAAMVCGFGDSVSYDQL
VQKITGARLDKSSRFTDWRHRPLSEKQLDYALADVTHLIEVYQHLSAELVRENRAHWLNE
EMEVLTARETYDPHPEDAWKRLKMRLRKPQELAIVQAVAAWREREARERDVPRGRVLKDD
AIYEVAQQAPRDAAALAKLRTTPKGWERSVTATALLGAVNTALALPREDMPKLPKSFQPP
EGSNAAAELLKVLLRIVAEKEGVASKVLASSDDIDRIAAEGEAADVPALQGWRRAVFGEA
ALKLVRGEIAIKFDKRKIALFDL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcatcaccacccaagaagaactcgagaccgctgttgccgcgttcgaaaagtcg
gatttcgtcaccgtcgacaccgaattcattcgcgagacgaccttttggccgatcctctgc
ctgatccagatggcggcgcccggcgtgacggcgctgatcgatccgctgtcacccgacatc
gacctgaagccgttcttcaggctgatggccaacgaggccgtcgtcaaagtcttccatgcg
gcgcgccaggacatcgaaatcatcgttcatctcggcgatctggtcccgcatccggtgttc
gacacccaggtggcggcgatggtttgcggcttcggcgacagcgtctcctatgaccagctc
gtccagaagataaccggcgcccggctcgacaagtcctcacgtttcactgactggcgccac
cggccgctttccgagaagcagctcgactacgcgcttgccgacgtcacccatttgatcgag
gtctaccagcacctcagcgccgagctggtgcgcgagaaccgcgcccattggctgaacgag
gagatggaagttctgaccgcgcgcgagacctacgatccgcacccggaggacgcctggaaa
cggctgaagatgcggctgcgcaagccgcaggagctggcgatcgtgcaagcggtggccgca
tggcgcgaacgcgaggcgcgcgaacgcgacgtgccgcgcggccgggtgctcaaggacgac
gccatctacgaggtggcgcagcaggcgccgcgcgatgcggcagcactcgccaagctgcgc
accacgccgaaaggctgggaacgctcggtgacggcaacggcgctgcttggcgcggtcaac
accgcgcttgccttgcccagggaagacatgccgaagctgccgaagagttttcagccgccc
gaaggctccaatgccgccgcggaactgctgaaagtgctgttgcggatcgtcgctgaaaag
gagggcgtcgcttcgaaggtgctggcctccagcgacgacatcgaccgcatcgccgccgag
ggcgaggccgccgacgtgccggccttgcaaggctggcggcgcgccgtgttcggcgaggcc
gcgctcaaactggtgcgcggcgagatcgcgatcaagttcgacaagcgcaagatcgcgctg
ttcgatttgtag
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