Mycoplasmopsis meleagridis: NCTC10153_00562
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Entry
NCTC10153_00562 CDS
T07139
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V C-terminal fragment
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mmel
Mycoplasmopsis meleagridis
Pathway
mmel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC10153_00562 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmel03400
]
NCTC10153_00562 (recD)
Enzymes [BR:
mmel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC10153_00562 (recD)
DNA repair and recombination proteins [BR:
mmel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC10153_00562 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
SH3_13
UvrD_C_2
AAA_11
PIF1
AAA
DEAD
UvrD-helicase
SLFN-g3_helicase
AAA_22
Helicase_RecD
AAA_16
AAA_24
RNA_helicase
AAA_5
AAA_7
PhoH
NTPase_1
AAA_14
AAA_18
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
VEU77752
LinkDB
All DBs
Position
1:complement(641826..643940)
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AA seq
704 aa
AA seq
DB search
MDEENQLKIEGEIIKILFEKKGFILYLFVEDKTKKNYKVISKTSNLLKRKKYILFLNKYN
KKYDSYEIYEISEPKYSRNEIKKILIFNIKNFGPAKAKKIEEFCGTNNWETILSSFTKNN
YFIDILGKQIADSLKQFLEDSVGKYFLNNNLYFLFNELRKETDMSSFFDDIMKESIYNFY
FKFSISPLKLLKLEDSLKLNQINYLDDFSLKNEVFILYYFGYFCEKNNSTLIPYDLFKIA
SFINEFYHIENKDLEDKIADLLSKKKLIFSEDCLKITTESIRKKEQDILKNIYKIMQSYI
FIENNHSSYELSSKQQQAFIKAIDYPVSIITGPPGTGKSYVVKEIYNNFLNSNIKKNEIQ
ILAPTGRAAANLIQKGLDNVRTIHSFLKIPKEEKFKNIGEINNDLKILIIDEFSMVNIDI
FDFLLKKCPMIKKLVIIGDNNQIPCIGAGNILGDLIESKKIPFTELDEFYRTDNLDLINH
FYKIKNNIFEISNSSRVNFYDFSKNDFYNNLYKIWTNNINKYGEDNVIFLAPTNELVNEI
NKKIQKYRIESIPNAISFDVLSNSEPLYLGDRVIQIVNDYDLDVFNGEIGKVVEISDNLL
IVDFEYKKIVYSKEIIKENLKLAYATTVHKFQGSETNCVNFLVFSDFSHMLKNKLIYTAI
SRAKEEINVIGDISLYASKIRDRKNNEVIYTSMQEILKKEKWWN
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagaatcaattaaaaatagaaggcgaaattataaaaattcttttcgaaaaa
aaaggatttattctttatttatttgtagaagataaaactaaaaaaaattataaagttatt
tctaaaacgtcaaatcttttaaaaagaaagaagtatattttatttttaaataagtacaat
aaaaaatatgattcttatgaaatatatgagataagtgaaccaaaatattcaaggaacgaa
ataaaaaaaattttaatttttaatattaaaaattttgggccggcaaaagcaaaaaaaata
gaagaattttgtggcacaaataattgagaaacaatattgtcttcatttactaaaaataac
tattttatagatattttaggaaaacaaattgctgattctttaaaacaatttcttgaagat
tcggtagggaaatattttctaaataataatctttactttttatttaatgaattgagaaaa
gaaacagatatgtcttctttttttgacgacattatgaaggaaagtatttacaatttttat
tttaaattttccatttctcctttgaaattattaaagttagaagattctttaaagttaaat
caaattaattatttagatgatttttcattaaaaaatgaagtttttattttatattatttt
ggctatttttgtgagaaaaataatagcactttaataccttatgatttatttaaaattgca
tcttttatcaatgaattttatcatatagaaaacaaagatttagaagataaaatagctgat
ttgttaagtaaaaagaaacttattttttctgaagattgtcttaaaatcacgactgaatca
ataagaaaaaaagagcaagatattttaaaaaatatatacaaaattatgcagagttatatt
tttattgagaataatcattcaagttatgaattaagttctaaacaacagcaagcatttatt
aaagctatagattatccagtttctattattacaggcccaccaggaacaggtaaatcttat
gtagtaaaagaaatttataataattttttaaatagtaatattaaaaaaaatgaaattcaa
attttggcccctactggaagagcagccgctaatttaattcaaaaaggattagataatgtt
agaactattcatagttttttaaaaatccctaaggaagaaaaatttaaaaatattggtgaa
attaataatgatttaaaaatacttataatagatgaattttcaatggttaatattgatatt
tttgattttttattaaaaaagtgtcctatgattaaaaaattagtaataataggtgataat
aatcaaattccatgcattggagcaggtaatattttaggagatttaatagaatcaaaaaaa
atacctttcacagaactcgatgaattctatagaactgataatttagatttaataaatcat
ttttataaaataaaaaataatatttttgaaatatcaaattcatcaagagtgaatttttat
gattttagtaaaaatgatttttacaataacttgtataaaatatgaactaataacattaat
aagtatggagaagacaacgttatttttttagctccaacaaatgaattagttaatgaaata
aataaaaaaattcaaaaatatagaattgaatccattcctaatgctatttctttcgatgtt
ttatctaattctgagcctttatatttaggagatagagttatacaaatagtaaatgattat
gatttagatgtttttaatggcgaaataggaaaagtagtagaaataagtgacaatttactt
atagtagattttgaatataaaaaaattgtttactcaaaggaaataattaaggaaaatttg
aaattagcttatgctacaacagtccataaatttcaaggatccgaaacaaattgtgtaaat
ttcttagtttttagtgattttagccatatgttaaaaaataaattaatttatacagcaata
tcaagagcaaaagaagaaattaatgtgataggtgatattagtttatatgcttctaaaatt
agagatagaaaaaataatgaagtaatttatacttctatgcaagaaattttaaagaaggag
aagtgatgaaattaa
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