Methylococcus mesophilus: OOT43_04070
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Entry
OOT43_04070 CDS
T09468
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mmeo
Methylococcus mesophilus
Pathway
mmeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OOT43_04070 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmeo03400
]
OOT43_04070 (ruvB)
Enzymes [BR:
mmeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OOT43_04070 (ruvB)
DNA repair and recombination proteins [BR:
mmeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OOT43_04070 (ruvB)
RecFOR pathway proteins
OOT43_04070 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
Mg_chelatase
AAA_22
nSTAND3
AAA_3
AAA_14
AAA_28
AAA_18
Rad17
NTPase_1
AAA_17
NB-ARC
ABC_tran
AAA_24
RNA_helicase
TsaE
DUF815
Bac_DnaA
AAA_33
NACHT
IstB_IS21
MMR_HSR1
ATPase_2
NPHP3_N
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
UZR29819
LinkDB
All DBs
Position
complement(904267..905301)
Genome browser
AA seq
344 aa
AA seq
DB search
MTQRLVSAAGQWDEEAIDRAIRPKRLEDYVGQRAMREQMAIFIQAALGRGEALDHVLIFG
PPGLGKTTLANIIANELGVNVRHTSGPVLEKAGDLAALLTNLEPRDVLFIDEIHRLGAVV
EEVLYPAMEDYQIDIMIGEGPAARSIKLDLPPFTLVGATTRAGLLTSPLRDRFGIVHRLE
FYTVEELGRIVARSARILGSEITPEGALEVARRARGTPRIANRLLRRVRDFAQVMADGRI
TEEVAGRALEMLDVDPNGFDQSDRRLLLTMMEKFEGGPVGLDNLAAAIGEERGTIEDVLE
PYLIQQGFIMRTPRGRVATRNAYLHFGLKPPQRTNINEEIFGDE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagcggctggtgagtgcggcgggacagtgggacgaggaggcgatcgaccgcgcc
atccggcccaagcgtctggaggattacgtcggccagcgcgccatgcgcgagcagatggcg
atcttcatccaggcagcgttggggcgcggcgaggcgctggatcacgtcttgatcttcggc
ccgccgggcctgggcaagaccaccctggccaacatcatcgccaacgagctgggcgtcaat
gtccgccacacctccgggccggtgctggagaaggccggcgacctggcggcgctgttgacc
aacctcgagccccgagatgtgctgttcatcgacgagattcatcgtctgggcgccgtggtg
gaagaggtgctgtatccagcgatggaggattatcagatcgatatcatgatcggggaaggc
cccgccgcccgttcgatcaagctcgatctgccgccgttcaccctggtcggcgccaccacc
cgcgccgggctcctgacctcgcccctgcgcgaccgtttcggcatcgtgcaccggctggag
ttctacaccgtcgaagagttgggcaggatcgtcgcccgttccgcccggatactgggcagc
gagatcaccccggaaggggcgctggaagtggcgcgccgtgcccgtggcaccccgcgtatc
gccaaccgcctgctgcggcgggtccgcgacttcgcccaggtcatggccgatggccggatc
accgaagaggtggccggtcgcgcgctggaaatgctggatgttgacccgaacggcttcgat
cagtcggaccgccgtctgctgcttactatgatggaaaaattcgaaggcggccccgtcggc
ctggacaatctggccgcagcgatcggcgaggagcgcggcaccatcgaggacgtgttggag
ccctatctgatccagcagggcttcatcatgcggacgcctcgcggccgcgtcgccacgcgc
aacgcctatctccatttcgggctgaagccgccgcagaggacgaatatcaacgaggaaata
ttcggcgatgagtga
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