Methylococcus mesophilus: OOT43_07160
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Entry
OOT43_07160 CDS
T09468
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
mmeo
Methylococcus mesophilus
Pathway
mmeo02020
Two-component system
mmeo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mmeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OOT43_07160
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OOT43_07160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmeo03021
]
OOT43_07160
Transcription machinery [BR:
mmeo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OOT43_07160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
CCDC14
ETC_C1_NDUFA5
SLFN_nematode
Motif
Other DBs
NCBI-ProteinID:
UZR30404
LinkDB
All DBs
Position
1550547..1552010
Genome browser
AA seq
487 aa
AA seq
DB search
MKQSLQLRLGQQLAMTPQLQQAIKLLQMSTLELQQEIQQALDSNMMLEVTDEEEHVRDAA
ADETPVTHSEPSYGELPDLDTQTTIPDELPVDSSWEDVFDGVHSYAPSGGTEPENEDFLG
QRGKGQSLQEYLRWQMELTPFTERDHAIATAIIDAIDDDGYLDTNLEGIHQGLTSQLENL
EQDEVQAVLHRIQNFDPPGIAAENPADCLRIQLQQMPEDTPYRAQAIELVSHHVDLLAKK
DLVRLKKALELDDDELAETIRLVRSLDPKPGRSVELDDYQYIIPDVFVYRQGAEWAVALN
PEIAPKLRVNPYYSGLIRRADSSSDNVTMRNHLQEARWFIKSLQSRNETLLKVARAIVDR
QREFLDVGETAMKPLVLRDIAEEVSMHESTISRVTTQKYMHTPNGIYEFKYFFSSHVSTD
SGGECSATAIKAFLREIVSKEEATKPLSDHAIAGMLKDKGINVARRTIAKYREAMGIPPS
NERKQLF
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatcactgcaacttcggctggggcagcaactggccatgaccccgcagctgcaa
caggccatcaagctgttgcagatgtccacgctcgaattgcagcaggaaatccagcaggcg
ctggattccaacatgatgctggaagtcaccgacgaggaagagcacgtccgcgacgcggca
gccgacgagacacctgtcacccatagtgaacccagctacggcgaactcccggacctcgac
acccagaccaccattcccgacgagctgccggtcgactcgtcctgggaggacgtcttcgac
ggcgtacacagctatgcgccgagcggggggacagagccggaaaacgaggatttcctgggg
cagcgcggcaagggacagagcctccaggagtacctgcgctggcagatggaactcacgcct
ttcactgagcgggatcatgccattgcgaccgccatcatcgatgcaatcgacgacgacggc
tacctggacaccaatctggaaggcatacaccaagggctgacttcgcaactcgaaaatctt
gaacaggacgaagtccaagcggtgttgcaccgcatacagaacttcgatccgcccggcatc
gcggccgaaaacccggctgactgcctgcgcatccaattgcagcagatgccggaggacacg
ccctaccgagcccaagccatcgaactggtcagccatcacgtcgacctgctcgcaaagaag
gacctggtccggctcaagaaagcgctggaactggacgacgacgagctcgcggaaacgatc
cgcctcgtaaggtccctggacccgaaaccgggtcgctcggtcgaactcgacgactaccag
tacatcattccggacgttttcgtctatcggcagggcgccgaatgggccgtcgcactcaat
cccgaaatcgcccccaagctgcgcgtcaacccctattacagcggcctgatccgacgggcg
gacagcagttcggacaacgtcaccatgcggaatcacctgcaggaagcgcgctggttcatc
aagagcctgcagagccgcaacgaaaccctgctcaaagtggcgcgcgccattgtggaccgc
cagcgcgagttcctggatgtcggcgaaaccgcgatgaaacccctggtgctgcgcgacatc
gccgaggaagtctccatgcacgagtccacgatctcgcgggtcaccacccagaagtacatg
catacgcccaacggcatctacgaattcaagtatttcttttcgagccacgtttccacggat
tccggcggagaatgctcagccaccgcgatcaaggctttcctcagggaaatcgtgagcaag
gaagaggccaccaagccgctgagcgaccatgccatcgccggcatgctgaaagacaagggc
atcaacgtcgcgcggcgaaccatcgccaaataccgtgaagcgatgggcattccgccttcc
aacgaaagaaaacagttgttctaa
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