Methylococcus mesophilus: OOT43_07465
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Entry
OOT43_07465 CDS
T09468
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mmeo
Methylococcus mesophilus
Pathway
mmeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OOT43_07465 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmeo03400
]
OOT43_07465 (recB)
Enzymes [BR:
mmeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OOT43_07465 (recB)
DNA repair and recombination proteins [BR:
mmeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OOT43_07465 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UZR30461
LinkDB
All DBs
Position
complement(1615392..1619012)
Genome browser
AA seq
1206 aa
AA seq
DB search
MTPAHPLDVFGCPLAGVNLIEASAGTGKTWNICGLYLRLLLEQEREVRDILVVTFTNAAT
AELRERIRGRIVETLGFLNGAGGAAGDPFVPALVSTLEGRLERGEMRKRLDRALLGFDEA
SIFTIHGFCQRALAGTPFAAGLPFTLELVQGDETLVQEVANDFWRRRVAAGSLSRLMIAH
LVESGDEPTYYAGLLKRALAKPLSPQLWPEPVEAPGERDELALSEAFREAQALWREASAG
IVRLLEAALADLNGVSFKPASIEQARVAWEAWFATRDPQAPVEDKVRLYRATALEKGTKK
GKTTPVHPFFDAAESLLALKEGIQQRLAAARLGLIRELVEQGGQALREEKRRRRVIGFDD
MLWNVHEALTSGRYPWLAAALRSRYPAALIDEFQDTDPLQFAIFRALYMTEGAEAGPVFL
VGDPKQAIYSFRNADLHTYLGARRETDREYTLAENQRSLAGVIDACNGLFGANPRAFMLD
GLDYHPVRLGAKPRKPFADASERRAPFQVWLLPKDEAGSPVLRAEAMRVCTDTTAAEIAR
LIREGRTGRIGVGERGLRASDIAVLVRSHAQGRRIRQALGALGVGSVELSQASVFHAAEA
EEIERILLAVLEPNRDRLLRGALATEIMGFDGPAIAAHSADESRLLDTVLRFGEYRELWR
ERGFGPMFRRFLHDEGVARRALARPDGERRLTNLLHLGELLHQAQANLTSPDALLRWLQG
RRRDTAAAPDAAQLRLESDQNLVQIVTIHKSKGLEYPVVFCPYLWDRFRNSRGGQEGIEY
HDEAGRPVLDYRPEAKGDAGIKGLRRLEDDAETLRLVYVALTRAVYRCYLFAGIYGAKNG
NSVSYGESARSMLNWLACGKDYTPGQWQDSKTGIEPAQVEAAWRGLADSVGADFGVGPMP
AIPRTAASEPTADPDRLAAQTPPPWVPIGWSMGSFTSLSRAMDAGAEGRDHDAFSAPVGA
GQPSATLPESDILRFPRGASAGICIHHLFERADFTDPAGWDTAVERALAMQPQGGAPFLP
AMLKNMLADVLSADLGDGLRLSGIGRGQRLSELSFHMPAEGLDPARLAAVLGGHGYSIGA
LDFRTLSGYLQGAIDLVFRHGGKYYLLDWKSNHLGYAREDYGAAALAEAMTAERYHLQYL
LYTAALNRYLARRLPDYDYATHFGGVYYLFVRGVRPAWNGAGVYFHRPAEPCIAALDALI
GGRLEA
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggcacatcccctcgacgtcttcggctgtccgctggctggcgtcaacctgatc
gaagcctctgccggcaccggcaagacctggaacatctgcggcctgtacctgcggctgctg
ctggagcaggaacgggaggtgcgggacatcctggtcgtcaccttcaccaatgcggcgacg
gccgagttgcgcgagcgcatccgcggccggatcgtcgagaccctggggttcctgaacggg
gcgggcggcgctgcgggcgatcccttcgttcccgctctggtatcgaccctcgaaggacgg
ttggagcggggcgagatgcggaagcggctggaccgggcgctgctgggtttcgacgaggcc
tcgatcttcaccatccacggcttctgccagcgcgccctggccgggacgccgttcgctgcc
gggcttccgttcacgctggaactcgttcagggtgacgagacgctggtacaggaggtcgcc
aacgatttctggcgccggcgcgtggcggccggcagcctgagccgcctcatgatcgcccat
ctggtcgaatcgggcgacgagcccacgtactatgccggcctgcttaagcgcgcgctggcc
aagccgttgtcgccgcagctgtggcccgagccggtggaggcaccgggcgagcgggacgaa
ctggcgttgtcggaagctttccgcgaggcgcaggcgctatggcgggaggcttcggccggc
atcgtccgcctgctggaagcggcgcttgcagacctcaatggcgtgtcctttaagccggct
tccatcgagcaggcacgtgtggcttgggaggcgtggttcgcgacgcgggatcctcaggcg
cccgtagaagacaaggtcaggctgtaccgggcgactgccctggaaaagggcacgaagaag
gggaaaaccacgccggtacatcctttcttcgatgccgccgaaagcctgttggcgcttaaa
gaaggcatccagcagcgtttggcagccgcgcgcctgggcctgatccgcgaactggtcgag
cagggcgggcaagcgctgcgggaagagaagcgccggcgccgggtgatcggcttcgacgac
atgctttggaacgtccacgaggcgctgacgtcaggccgctacccttggctggcggcggcc
ctgcgcagccgctatccggcggcgctgatcgacgaattccaggacaccgatccgctgcag
ttcgccatcttccgcgccctgtacatgacggaaggcgcggaggccgggccggtgttcctg
gtcggcgatcccaagcaggcgatctacagcttccgcaatgccgatctccacacctacctc
ggcgcccgccgcgaaaccgaccgggaatacaccctggcggaaaaccagcgctcgctggcg
ggtgtgatcgatgcctgcaacggcctgttcggcgccaacccgcgggccttcatgctcgac
ggtctcgactaccatccggtgcggctgggtgccaagccgcgcaaaccgttcgccgatgcc
agcgagcggcgggcgccattccaggtctggctgctgccgaaggacgaggcgggttctccg
gtgctgcgggcggaagccatgcgggtttgcacggatacgaccgccgccgagatcgcgcga
ttgatccgggagggccggaccgggcgcatcggcgtcggcgagcgcggcttgcgcgcctcg
gacatcgcggtgctggtgcgcagccacgcgcagggccggcgcatccgtcaggccctgggt
gcgctgggggtgggcagcgtcgagctgtcgcaggccagcgtattccatgccgccgaggcc
gaggagatcgaacgcatcctgctggcggtgctggagcccaaccgcgaccgcctgttgcgg
ggcgcgctggcgaccgaaatcatgggcttcgatgggcccgcgatcgccgcgcattcggcc
gacgagagccgtctgctggatactgtgctgcgcttcggcgagtaccgcgagctgtggcgg
gagcgcggtttcgggccgatgttccgccgcttcctgcatgacgaaggcgtggcccgccgg
gcgctggcccgtcccgacggcgagcgccgcctcaccaatttgctgcacttgggcgagttg
ctgcaccaggcccaggccaacctgacttcgccggacgccttgctgcgttggctgcagggc
cggcggcgcgacaccgccgcggcaccggatgccgcccagttgcggctggagtccgaccag
aatctggtgcagatcgtcaccatccacaagtccaaggggctggagtacccggtggtgttc
tgcccttatctctgggatagattccgcaacagcagaggcgggcaggaaggcatcgaatac
cacgacgaggcgggccggccggtgctcgattaccgtccggaggcgaagggcgacgccggc
atcaagggtttgcgccggttggaagacgacgccgagaccctgcgcctcgtctacgtggcc
ctgacccgtgcggtctaccgctgctacctgttcgccgggatctacggcgccaagaatggc
aactcggtgtcctacggcgaaagcgcccgcagtatgctcaactggttggcctgcgggaaa
gactacacgcccgggcaatggcaggattccaagaccgggatcgaaccggcacaggtggaa
gccgcctggcggggcttggcggactcggtcggcgccgacttcggcgtcgggcccatgccg
gccatcccacggacggcagcatccgagccgacagcggaccccgaccggctggcggcgcag
acgccgccgccctgggtgccgatcggctggtccatgggcagcttcacttccttgagccgg
gccatggacgccggcgccgaggggcgcgaccacgacgccttcagcgctccggtcggggcg
ggccagccgtcggcaacactgcccgagagcgacatcctgcgcttcccgcgcggcgcatcg
gccggcatctgcatccatcacctgttcgagcgggccgatttcaccgatccggccggttgg
gatacagccgtcgagcgcgccctggcgatgcagccgcagggcggagcgccgtttcttccc
gccatgctgaaaaacatgctggccgatgtgctgtcagccgatctgggcgacggcctgcgg
ctgagcggaatcggccgcgggcagcggctgagcgaactgtccttccacatgccggcggag
ggtctggacccggcgcgcttggccgcggtgctgggcggccacggctattcgatcggcgcg
ctggatttccggacgctgagcggctatctgcagggcgccatcgacctggtgttccgtcac
gggggcaagtactacctgctggactggaagtcgaaccatctcggctatgcgcgcgaggac
tacggtgccgcggcactggcggaggccatgaccgcggagcgctatcacctgcaatacctg
ctgtacaccgccgcgctgaaccgttacctcgcccggcgcctgccggactacgactacgcc
acccatttcggcggggtgtactacctgttcgtgcgcggagtccggccggcttggaacggt
gccggggtctatttccatcggcccgctgaaccttgtatcgccgcgctggatgccttgatc
ggcgggaggctcgaggcatga
DBGET
integrated database retrieval system
