Methylococcus mesophilus: OOT43_14130
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Entry
OOT43_14130 CDS
T09468
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmeo
Methylococcus mesophilus
Brite
KEGG Orthology (KO) [BR:
mmeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmeo03032
]
OOT43_14130 (topA)
03400 DNA repair and recombination proteins [BR:
mmeo03400
]
OOT43_14130 (topA)
Enzymes [BR:
mmeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OOT43_14130 (topA)
DNA replication proteins [BR:
mmeo03032
]
Prokaryotic type
DNA Topoisomerases
OOT43_14130 (topA)
DNA repair and recombination proteins [BR:
mmeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OOT43_14130 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
UZR27852
LinkDB
All DBs
Position
2965641..2967947
Genome browser
AA seq
768 aa
AA seq
DB search
MAQHLVIVESPAKARTIEKYLGKSFQVYASYGHVRDLIPKEGAVDPDHDFSMKYEIIEKN
KKHVQAISKAMEKADALYLATDPDREGEAISWHLYELLKEQQVLDSKPVHRVVFHEITKR
AITEAVANPKPLSTDLIHAQQARRALDYLVGFKLSPLLWKKIRRGLSAGRVQSPALRMIV
ERELEIERFEIQEYWTIEAAIQSEDQALSARLTHLAGKKLEQFSIVNEEQAQATRQSLLD
QARGKLRVTRVEEKERKRNPAAPFTTSTLQQEAARKLGFTTRRTMTVAQQLYEGIDLGGE
AVGLITYMRTDSVNLAQEAIQELRALIESRYGKDNVPEQPRLYKTKSKNAQEAHEAIRPT
SAFRSPESVKAHLTPDQLKLYSLIWKRSVACQMVHATLNTVTVDFACGSTDNLFRATGST
VIHPGFMSVYREGQDDVPEESDEIYLPKLAEGQEVDLREVIPSQHFTEPPPRYTEASLVK
ALEEYGIGRPSTYATIISTLQQRHYVELETKRFHPTDLGRVVNKFLTEHFNRYVDYNFTA
DLEDDLDAVSRGEKDWIPLMREFWGPFHTLIGEKDESLKRADVTHEAIDEKCPECGSPLS
IRLGRNGRFIGCNNYPQCKYTRNLAGKESEQAEPEVVEGRQCPKCNSPLVIKTGRYGRFI
GCSGYPTCRHIEPLEKPTDTGVTCPECHQGTLTKRKSRFGKLFYSCSTYPKCSYAVWNPP
IPEACPACQWPVLTLKTTKRRGTEKVCPRKECGYAAPYEGEPLTDSAA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacatctcgtcatcgtcgaatcgccggccaaagcccggacgatcgaaaaatat
ctcggcaagtctttccaggtctatgcctcctacgggcacgtgagggatctgatccccaag
gaaggcgcggtcgatccggaccacgatttttcgatgaagtacgaaatcatcgaaaagaac
aagaagcatgtgcaggcgatttccaaggccatggaaaaggccgatgcgctttacctcgcg
actgacccggaccgcgaaggcgaggcgatttcctggcatctgtacgaactgctgaaggaa
cagcaagtgctcgacagcaagccggtgcaccgggtggtttttcatgagatcaccaagcgc
gcgatcaccgaagcggtggctaaccctaagccgctgtcgaccgatttgatccatgcccag
caggcccggcgggcgctcgattacttggtcggcttcaagctttcgcccctgttgtggaag
aaaatccgccgcggcctgtcggcgggccgggtgcagagccccgccttacggatgatcgtg
gaacgcgagctcgaaatcgagcgcttcgagatccaggaatactggaccatcgaggcggcg
atccaatccgaagatcaggcgctttcggcacggctgacccatctggccggcaagaagctc
gagcagttcagcatcgtcaacgaagagcaggcgcaagccacgcggcagagcttgctggat
caggcccggggcaaactgcgggtgaccagggtcgaggagaaggagcgcaagcgcaaccct
gctgctcccttcaccacttcgaccctgcagcaggaagccgccaggaagctcggtttcacc
acccggcgaaccatgacggtggcgcagcagctctatgaaggcatcgacctcggcggcgag
gcggtgggcctgatcacctacatgcgcaccgattcggtgaacctggcccaggaagcgatc
caggaattgcgcgcgctgatcgagtcgcgctacggcaaggacaacgtgccggagcagccg
cgcctctacaagacgaagagcaagaacgcccaggaggcccatgaggcgatccgtccgacc
tcggcgttccgcagcccggagtccgtaaaggcgcatctgacgccggaccagctcaagctc
tacagcctgatctggaagcgtagcgtggcctgccagatggtccatgcgaccttgaacacc
gtcacggtggacttcgcctgcggcagtaccgacaacctgttccgggccactggctcgacc
gtgatccatccgggtttcatgtcggtgtaccgggaaggtcaggacgatgtaccggaggaa
agcgacgaaatctatctgcccaaactggcggaggggcaggaggtcgacctgagggaggta
atcccctcgcagcatttcaccgagccgccgccgcgctataccgaggccagcctggtcaag
gcgctggaagagtacggcataggccggccgtcgacctatgcgaccatcatttcgacgttg
cagcagcggcattacgtcgagctggaaaccaagcggttccatcctaccgatctggggcgg
gtggtgaataagttcctgacggagcatttcaaccgttacgtcgactacaacttcaccgcc
gatctcgaagacgatctggacgccgtgtcgcgcggggaaaaggactggattccgctcatg
cgggaattctgggggccattccacaccctgatcggcgaaaaggacgaaagcctgaaacgg
gccgacgtgacgcatgaggcgatcgacgagaaatgcccggaatgcgggagtccgctatcg
atccggctggggcgcaacgggcgcttcatcggctgcaacaattatccccagtgcaaatac
acgcgcaatctggcgggcaaggaatcggagcaggccgaacccgaagtcgtcgaagggcgg
caatgcccaaaatgcaactcgcccttggtcatcaagacggggcgctacggccgcttcatc
ggctgcagcggctatcccacctgccgccacatcgagccgctggagaagcccaccgatacc
ggcgtgacgtgtccggagtgccaccagggtaccttgaccaagcgcaagtcgcgcttcggc
aagctgttctattcctgctcgacctaccccaaatgcagctatgccgtgtggaatccgccg
attcccgaggcttgtcccgcctgccagtggccggtgctcaccctgaagaccaccaagcgc
cgtggcaccgagaaagtgtgtccgcgtaaggagtgcggttatgcagcgccatacgaaggt
gagccgctgaccgattccgccgcttga
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