Methylococcus mesophilus: OOT43_15985
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Entry
OOT43_15985 CDS
T09468
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mmeo
Methylococcus mesophilus
Pathway
mmeo03030
DNA replication
mmeo03410
Base excision repair
mmeo03420
Nucleotide excision repair
mmeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OOT43_15985 (polA)
03410 Base excision repair
OOT43_15985 (polA)
03420 Nucleotide excision repair
OOT43_15985 (polA)
03440 Homologous recombination
OOT43_15985 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmeo03032
]
OOT43_15985 (polA)
03400 DNA repair and recombination proteins [BR:
mmeo03400
]
OOT43_15985 (polA)
Enzymes [BR:
mmeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OOT43_15985 (polA)
DNA replication proteins [BR:
mmeo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OOT43_15985 (polA)
DNA repair and recombination proteins [BR:
mmeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OOT43_15985 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OOT43_15985 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UZR28197
LinkDB
All DBs
Position
3360702..3363428
Genome browser
AA seq
908 aa
AA seq
DB search
MSDTSPLLVLVDGSSFLYRAFFALPPLTNSRGEPTGAVYGVINMLRKLVQSYGTAHVAVV
FDAPGRNFRDELFEHYKAHRPPMPDDLRSQIDPLHQVVRALGLPMLIEPGVEADDVIGTL
ARQAVERGFRVLISTGDKDMAQLVCDRVTLENTMFDSRLDVEGVIAKFGVPPQRIVDYLA
LVGDTSDNIPGVPKVGPKTAAKWLAEYGSLDALIARAGEVGGKIGENLRASLELIPLSRE
LATIRCDIPLPLAPESLERQPPDKAALRELYARLEFKTLLRQLDAEPADSKSSGAESAPV
PSAPPVETSYEMVADEAALDRWLEKLAAAELFAFDTETSSLDYMRAEVVGVSFAVEPGEA
AYVPLAHDYPGAPVQLDRARVLERLRPLLEDETQPKLGQHLKYDANVLLNHGIALRGIRH
DTMLESYVLNSTATRHDMDSLAERYLDRKTIHYEDVAGKGAKQIPFAQVSVEDACRYAAE
DADITLCLHRALWPQLEREPGLRAVYENIEIPLVPVLSRIERSGVLVDVYKLAEQSRELE
LRMAEVEIEAQTVAGETFNLGSPKQIQTILYDKLGLPVIKKTPTGQPSTDESVLQDLAET
FELPRLILEYRSLSKLKSTYTDKLPQQVNPRSGRVHTSYHQAVAATGRLSSSDPNLQNIP
VRTEEGRRIRQAFIAPPGHKLLAADYSQIELRIMAHLSGDANLLAAFAEDADVHRATASE
VFGVALEEVTLNQRRSAKAINFGLIYGMSAFGLAKQLGIQQKLAQGYIDLYFTRYPGVRA
YMDSTRESARERGYVETLFGRRLHVPDIQSRNAQRRQYAERTAINAPMQGTAADIIKRAM
IAVDGWIEASRAPLRMIMQVHDELVFEVAEDFVPEAAAAVAKHMSRAAELAVPLVVDVGT
GDNWDEAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacacctctccgctcctcgtcctcgttgacggctcatcctttctgtaccgcgct
tttttcgccctgccgcctctgaccaattcccgcggggagccgaccggggcggtctacggt
gtcatcaacatgctgcggaaactggtgcagtcctatggcacggctcatgtcgccgtggtg
ttcgacgcccccggccgcaatttccgcgacgaactgttcgagcattacaaggcgcaccgg
ccgcccatgccggacgatctgcggagccagatcgatccgctgcatcaggtggtgcgggct
ttgggcttgccgatgctgatcgagccgggcgtggaggcggacgacgtcatcggcaccctg
gcgaggcaggcggtggagcggggcttccgggtgctgatctcgaccggtgacaaggacatg
gcgcaactggtgtgcgaccgcgtgacgctggagaacaccatgttcgacagccggctcgac
gtcgagggcgtgatcgccaagttcggggtgccgccccagcgcattgtcgattacctcgcc
ttggtcggagacacctcggacaatatccccggtgtgcccaaggtcggtcccaagaccgcc
gcgaagtggctggccgaatacgggtcgctcgatgcgctgatcgcccgtgccggcgaagtc
ggcggcaagatcggcgaaaacctccgcgccagcctggagctgatcccgctctcgcgcgaa
ctggcgaccatccgctgcgacatcccgctgccgctggcgccggagtcgctggagcggcag
ccgccggacaaggcggcgctgcgagagctgtacgcccggctggaattcaagaccttgcta
cggcaactggacgccgagccggcggactcgaagagcagcggagctgaatccgctccggtt
ccgtcggcgccgccggtcgagacgtcctatgaaatggtggcggacgaagccgcgctggac
cgctggctggagaagctcgcagcggccgagctgttcgccttcgacaccgagaccagcagc
ctggattacatgcgcgccgaggtcgtcggcgtgtccttcgcggtcgaacctggcgaggcg
gcctatgtgccgctggcgcacgactatcccggcgcgccggtccaactcgaccgggccagg
gtgctggagcgcctgcggccgctgctggaggacgaaacccaacctaagctgggccagcac
ctcaagtacgacgccaacgtgctgctcaaccatggcattgcgttgcgcggcatccgccac
gacaccatgctggagtcctacgtgctgaacagcacggcgacccggcacgacatggactcg
ttggccgagcgctacctggaccgcaagaccattcattacgaggacgtcgccggcaagggc
gcgaagcagatcccgttcgcccaggtttcggtcgaggacgcctgccgctatgccgccgag
gacgccgacatcacgctgtgcctgcatcgggcgctgtggccgcaactggaacgcgagcct
ggattgcgggcggtgtacgaaaacatcgagattccgctggtgccggtgctgtcccggatc
gagcgcagtggcgtattggtggacgtgtataaactggcggagcagagccgcgagctggag
ctgcgcatggccgaggtcgaaatcgaagcccagaccgtggctggcgagaccttcaatctc
ggctcgcccaagcagatccagaccatcctgtacgacaagctggggctgccggtcatcaag
aagacgcccaccggccagccgtccaccgacgaatcggtgctgcaggacctggccgaaacc
ttcgagctgccgcggcttatcctggaataccgctcgctctccaagctcaagtccacttac
accgacaagctgccgcagcaggtgaatccccgcagcggccgggtccacacctcctatcac
caggcggtggcggcgaccgggcggctgtcgtcctccgatcccaatctgcagaacatcccg
gtgcggaccgaggaaggccgccgcatccgccaggccttcatcgcgccgcccggccacaag
ctgctggcggcagattactcgcagatcgagctgcggatcatggcgcatctgtcgggcgat
gcgaatctgctcgccgctttcgcagaggatgccgacgtgcaccgcgccaccgcatcggaa
gtgttcggcgtggcgctggaagaggtgacgctcaaccagcgccgttccgccaaagccatc
aacttcgggctgatttacggcatgtcggccttcggcctggccaagcagctcggcatccag
cagaagctggcgcaaggctacatcgacctgtatttcacccgctatcccggcgtgcgcgcc
tacatggacagcacccgcgaatcggcccgcgagcgcggctacgtcgaaaccctgttcggc
cgccggctgcacgtgccggacatccagtcccgcaacgcccagcgccgccagtacgccgag
cgcaccgcgatcaacgcgcccatgcaggggacggcagccgacatcatcaagcgggcgatg
atcgcggtggacggctggatcgaagccagccgcgcgccgctgcgcatgatcatgcaggtg
cacgacgagctggtgttcgaggtggccgaggatttcgtgcccgaagccgccgcagccgtc
gctaagcacatgagccgcgccgcagaactcgccgtgccgctggtcgtcgacgtcggtacg
ggcgacaactgggatgaggcccattga
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