Methylococcus mesophilus: OOT43_16930
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Entry
OOT43_16930 CDS
T09468
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mmeo
Methylococcus mesophilus
Pathway
mmeo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OOT43_16930 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmeo03021
]
OOT43_16930 (rpoA)
03400 DNA repair and recombination proteins [BR:
mmeo03400
]
OOT43_16930 (rpoA)
Enzymes [BR:
mmeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OOT43_16930 (rpoA)
Transcription machinery [BR:
mmeo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OOT43_16930 (rpoA)
DNA repair and recombination proteins [BR:
mmeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OOT43_16930 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
UZR28381
LinkDB
All DBs
Position
3559820..3560806
Genome browser
AA seq
328 aa
AA seq
DB search
MHNSLAELIKPRTVEVVPHGTHSARVVIEPLERGFGHTLGNALRRVLLSAIPGAAVTDVV
IDGVLHEYSTIEGVQEDVIDVLLNLKSLAIRLNGPHDVYLNIDKQGPGQVLAGDMEVPHD
VEVLNPDLLIAHITGNGRLRMTLHVQKGRGYQPVASRAIEGDSAIGTLHVDASFSPIKKV
SYVVESARVEQRTDLDRLVIELQTNGTVQPEEAVKHAANILNQHLGILVDLKGEDLPLFG
EDGPQFDPLLLHPVDDLELTVRSANCLKAENIFYIGDLIQRSEADLLKTPNLGKKSLTEI
KDVLATKGLSLGMRLENWPPEGLKKLNP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcacaactcgcttgccgagctgatcaagccgcgtacggtagaggtggttccgcacgga
actcattctgctcgcgtggtcattgagcccctggagagggggttcggccacaccttgggc
aacgccttgaggcgtgtcctgctttccgctatccccggcgcagcggtaacggatgtcgtc
attgatggcgtgctgcacgaatattcgaccattgaaggggttcaggaggacgtgatcgac
gtgctgctgaatctcaagagtcttgccatccgcctcaacgggccgcacgatgtttacctc
aacatcgacaagcagggccctgggcaggttttggcgggcgacatggaggttccccatgac
gtcgaggtgttgaaccccgatctgctaatcgcgcacatcacgggaaacggtcgtttgcgc
atgacgcttcacgtgcagaaggggaggggctaccagccggtcgcgagccgggctatcgaa
ggcgattcggctatcgggaccttgcatgtcgacgcgagcttcagccctattaagaaggtg
tcctacgttgtcgagagcgcccgcgttgagcagcgtaccgacctcgaccggttggttatc
gaactccagacaaacgggacggttcagccggaggaagctgttaagcatgccgcgaacatt
cttaaccaacatctcggcattcttgtcgaccttaagggggaggatttgccgcttttcggt
gaggatggcccccagttcgatccgctgctgctgcaccccgtggacgatctcgagctaacg
gttcgttcagctaactgcctgaaggcggagaacatattttacatcggggacctcatccag
cgtagcgaggcagatttgctcaagactccaaatctgggaaaaaaatcgcttacggagatc
aaagacgttttggcgacgaagggtttgtcgctggggatgcgtctggagaattggccgccg
gaaggtctcaagaagctgaatccatag
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