Mercenaria mercenaria (northern quahog): 123522847
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Entry
123522847 CDS
T07835
Name
(RefSeq) dynein intermediate chain 2, ciliary-like isoform X1
KO
K10409
dynein axonemal intermediate chain 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
123522847
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mmer03037
]
123522847
04812 Cytoskeleton proteins [BR:
mmer04812
]
123522847
Cilium and associated proteins [BR:
mmer03037
]
Motile cilia and associated proteins
Dynein arm
123522847
Cytoskeleton proteins [BR:
mmer04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
123522847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_HPS5
WDR55
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Ge1_WD40
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
123522847
NCBI-ProteinID:
XP_045156249
LinkDB
All DBs
Position
8:24966749..25003961
Genome browser
AA seq
730 aa
AA seq
DB search
MPPKAIGKGKQGGMGGLSEMMKRRTTRIRGDGDDMTDAGDGTDADEWNITKTLVKPDDQL
DLSEQELKEEFTRILTANNPHAPQNIVRYSFKERQYKQTSSVDQLAIHFALDGNMIHKES
DEAQRQRTRLGVPEGGSHSEQAVSEAGEAASGAAGAGADGEEAKEELVQTTIDTDEAKEE
QREEASTPAPAQTEGGGSKKLTNQFNYSERASQTYNNPYRERGTATEPPPRAVFAANVTQ
WEIFDAYQEDFEKQEKNKEKKVIPGRKEEDKTRKRLTITETSQGDDVSRISKASKIIERM
VNQNTYDDIAQDFKYWEDPSDEYRENEGTLLPLWKFSYEKAKKLAVTSLCWNPKYKDLFA
VSFGSYDFMKQAGGMILFYSLKNPSFPENIYETDSGVMCLDVHPEHPYMVCVGFYDGSVG
VYNVEKKDGPMHRCTAKNGKHTDPVWQVRWQKDDLENNHNFYSISSDGRIVHWTIIKNEL
TFQDVIKLAMPDAPAEGPDGTKIQTIGCGTAFDFHKKNDYMFVVGSEEGKIHTCSKAYSS
QFLDSMDAHNMAVYKVRWNPYHPDIYITCSADWTVKIWERGNKSASDKNESADSATRKPL
FTFDLNNSVGDVAWAPFSSTVFAAVTADGKLFVYDLNVNKYEPLCEQMVAQKKKTKLTHL
EFNPQYPIVIVGDDRGTVTSCKLSPNLRKQPKEKKGVAAPDPSVREQAEIAKLDKILGMV
REPKDGKPTS
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaaagcgattggaaaggggaagcagggtggtatgggaggtttatcagaaatg
atgaaacgtcgaacgacaaggatacgtggtgatggggatgacatgacagatgccggagat
ggcactgatgctgatgaatggaacattacaaaaactttagtgaagccagatgatcagctg
gacctttctgaacaggaattgaaagaagagttcacaaggattctgacagccaacaatcca
catgctccacagaatattgtccgatacagttttaaggagagacaatacaaacagacttca
agtgtcgaccagctggctatccattttgctctagatggtaacatgatccacaaagagtca
gatgaggcccagcgtcagcgtacaagacttggtgtacctgaaggtggctcacacagtgag
caggctgtaagcgaagctggtgaagcggcatctggagccgccggtgccggtgccgacggc
gaggaggccaaagaggagctggttcaaacaacaatagacacggacgaggctaaagaggag
cagagggaagaggcctcaaccccagctccagcacaaaccgaagggggcggctcaaaaaag
ttgacaaatcagttcaattacagtgaacgtgcctcacagacctacaacaatccctatagg
gaacgaggtacagctacagaacctccaccgcgagcagtattcgctgccaatgtaacacaa
tgggaaatctttgatgcataccaggaagactttgaaaaacaggagaaaaataaagagaag
aaagttatacctggaaggaaggaagaggataaaaccagaaagaggctcacaattactgaa
acatcgcagggagatgatgtttctagaatttctaaggcatcaaagattatagaacgtatg
gtgaatcagaatacatatgatgacatagcacaggatttcaaatactgggaagatccgtct
gatgagtatcgtgaaaacgagggtacactgttgccgctatggaaattcagctatgagaaa
gcaaagaagttggctgtaacatcactctgctggaaccccaaatataaagatctgtttgca
gtgtcttttggatcatatgacttcatgaagcaagcaggtggaatgattctgttctactcc
ctgaagaacccctctttcccagagaacatttacgagacagacagtggtgtcatgtgtctt
gacgtacatcctgaacacccgtacatggtgtgtgtcggtttttatgatggtagtgttgga
gtatacaatgtagaaaagaaagatggaccaatgcatagatgtacagccaaaaatggaaaa
catacagacccagtctggcaggtgagatggcagaaggatgatctagaaaacaaccacaat
ttctactcaatctcctcagatggacggatagtacactggacaatcataaagaacgaatta
acattccaagatgtgatcaagcttgccatgcctgatgctccagctgagggtcctgatgga
accaaaatccaaacaattggatgtggaactgcatttgactttcataagaagaatgactat
atgtttgttgttggttctgaagaaggaaagattcacacatgttctaaagcttatagcagt
cagttccttgactcgatggatgctcacaatatggcagtttacaaggtgcgttggaaccca
tatcatccagatatctacataacctgtagtgctgactggactgtcaaaatctgggaaaga
ggaaataaatctgcaagtgacaaaaatgaatctgctgatagtgctactaggaaaccattg
tttacatttgacctgaataactccgtaggtgatgttgcttgggcacccttttcttccaca
gtatttgctgcagtcactgctgatggcaagttgtttgtatatgatctgaatgtgaacaaa
tacgagccactctgtgagcagatggttgcacagaaaaagaagacaaaactcacacatcta
gaattcaaccctcaatatcctatagtcattgttggagatgataggggaacagtaaccagc
tgcaagttatcgccaaacttaagaaaacaaccaaaggaaaagaaaggagttgcagcccct
gacccgtctgtcagagagcaagccgagatagccaagcttgataaaatcctcggcatggta
cgagaaccaaaggatggaaaacccaccagttaa
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