Mercenaria mercenaria (northern quahog): 123522948 Help Entry 123522948         CDS       T07835                                  Name (RefSeq) collagen alpha-3(VI) chain-like Organism mmer  Mercenaria mercenaria (northern quahog) SSDB OrthologParalogGFIT Motif Pfam:  VWA VWA_2 VWA_3 VWA_CoxE vWA_SIBA-E Copine Motif Other DBs NCBI-GeneID:  123522948 NCBI-ProteinID:  XP_053401099 LinkDB All DBs Position 1:47676468..47738761 Genome browser AA seq 2694 aa AA seqDB search MELVHCLFVLGFVWLSHAQTTDSSTNGTEGCDHNKADIVFLLDASYSEGQDNFRKQLDFV SNFTQGYDIGPDKVQVGIVTFSSYPHNAFYLNTYKDRQTLLNGIKNVPYKSGGTSTDDAL KFVRTDSFTTAHGGRFGVPKILVVMTDGQSSDPTGTATEARILHYDNIKVIAIGIGSGVN TKELNAIATDTQHSFTVPSFDSLQTIEKDIQTATCVSEKIDLVTCESKQADIVFVLDGSG SETAVNFQKQLEFVSNVTNTFDIGPNDIQVSLVTFDTHVFNEFFLNAYHNKTDVINAIMS AKYNGGTTNTAEALKFVRQNSFKPENGGRGNAVTRLVVVLTDGNSNSHYSTKMEATNLHH AGVKVISVGIGSSVSTTELTDIATDANHVFKVANFNSLDSIQRELESAACTTPSECGDKP TDIVFVLDASSSDGAANFQKQLDFMTDFVKQFDIGPSDVQVSLITFSSSAHSEFYLNTNK DKPSLIADIQSARYRGGTTATYDGLRYARYYHFAHYHGGRANATKLVIVLTDGRSNDVSR TITEAVQLKNSGAKVISIGIGSNVNQYELNTIATDRNHAFTVGSFDILHTLQEEIKDESC GEGKPKPTPNPECGSQPADIVFVLDSSASEGSSNFQKQVDFVRDFAYQFAIGPQDVQISV VVFSSGAHEQFPLNKYHDQASLLAAISRITYNSGATYTDRALSYVRTSSFTAAKGARPNA TDLVVVITDGQSTHPTETSKEAILLKNRANTKVVAIGIGNGVDHSELEKIASDSAHALAV ADFNALATIKSELTFVACQTCGFISKADIVFVLDASSSEGTLNFQKQLDFVSRVANDFQI GPNHVQIGMLTFSDYPNLEFYLNQYPDKSTLLSAIQKTGYLTGITNTDQALKYTRENMFS PKHGARDDAQNYLIILTDGASSNANLTLQQANLLKSQNIDILAIGIGSNINQNELNGIGS DSNHVFTVSTFDALKTVRADIKKAACEEVTTTTTTPMPTTTMKTTTTEHFIPDTTTEHFI PDTTTLGDEPQAQNCLHCPGTILSIYSKEDMSVLISKNVYLKVFIFVTCLVYSNAQTDDC GHSKADIVFLLDASTSEGENNFRKQLDFVGNFTNAHAIGKDGLQVGIVTFSTQPRNQFNL NRYSDKASLLNAIQNVPYALGDTYTNEALKYVRQNSFTAAHGDRSGVPNILVVMTDGEST IPTATVTESALLHKTDITVVAIGIGSRIQITELNTIASDRQHAFTVPSFDSLHSIEKEIQ NVTCVTEKSETTTLPTTSSTTTSTTTSTTTVTTTSIPSTIADCGHSKADIVFLLDASTSE GENNFRKQLDFVGNFTKAHTIGKDGLQVGIVTFSTQPRNQFNLNTYSDKASLLSAIQNVP YALGDTYTNEALKYVRQNSFTAAHGDRSGVPNILVVMTDGESTIPTATVTESALLHKTDI TVVAIGIGSRIQIKELNTIASDRQHAFTVASFDSLQSIENEIRNVTCVTEKLETTTLPTT STTTTSTTIVTTISIPPTIAECAHNKADIVFLLDSSISEGDENFKKQLDFVGNFTKDKEI GPDKVQIGIVTFSSSPHNAFNLNTYSDKPSLIQGIHSVKYMSGDTYTNLALKYVRENSFL ASRGSRSGVPKILVVMTDGGSTIPTETVNEAAKLHNTDVKVIAIGIGSQVQITELNTIAS DRQHAFTVPSFDSLQSIEKEIQRVTCVTNKVVQPSPAAIVDCVHNKADIVFLLDSSTSEG EDNFRKQLDFVANFTKGYDIGPAAVQVSIVAFSNQPHNIFYLNKYTDKLSLINGIRNVHY YRGDTYTDQALKFVRENSFLPVHGSRYGVPNILVVMTDGESTRPTATVIEAKTLHYTDIK VISIGIGNRVNPTELNKIATDHEHAFIVPSFDSLQTIEHEIQAVTCVSEKRVTCDNKRAD IVFVLHASRKDIFMTELDFVRNVTDVLSVGSGNIQVSLVTFGSQVYNEFFLNEYTSKSDI MRAELNASYISGEANTPMALEFVRINSFKSENGARGNSVTRLAIIITDEDSNVLYTTKNE AANLHHIGVKTISIGIGSSVSHAELDNIASDQRHVFSVTDSTNLGSLQQEIENVACTATS GCGDKPTDIVFILDSSATEGRDNFHKELDFMSEFVKQFDIGPSDVQVSLITVGSSPHTEF YLNEYKDKASLISAIQTSRYLGGGTDLYNGISFARYYHFSASHGARPNANRLVVVVTEGN SRDPSRTLYEAQLLQNTGAKITTITIGQNVNQYELTNIATDRNHAFSVGSFDILHTVLQE VTEETCEGAKPLPVPMTDCGKEQADIVFILDSSSSEGRVHFQTQLDFVRDFVYQFAIGPN AIQVSVVVFSTYVKEEFPLNKYHDQADLLSAISKIHFVSGASSTEKALHFVRTNSFLASK GARQNATDIVILLTDGRSGHPQDTKREALLLKNRPNTKVIAIGIGSAADRNELRTISSNN ESAIQITNFNVLTTLKPQLTYLACHTCDFFSKADIVFAIGVSNQSAFNFHKVIDFVSTIV NDLQIGVNNVHVGVLTFSGSPTKEISLNQYTSKATLLSEIQKIGYHSNGNSNVNEALEFA QDNMFPSSRVDRYTVQRELIIITDGFVSNTTITTKQVNLIKSDTNIIVVGIGSRVHISEM TRITSDKDHVFAVNTFDDLQKIRNDVKMASCEDFATTASPTTKTSTVIPTPKAQ NT seq 8085 nt NT seq  +upstreamnt  +downstreamnt atggagctggtgcactgtttatttgtcctgggctttgtctggctttcgcacgcccaaaca actgattccagtacaaatggaacagaaggatgtgaccacaataaggcagacattgtgttc ctcttagatgcctcttacagtgaagggcaggacaactttcgcaagcagctagactttgtc agtaacttcactcaaggatatgacattggtccagacaaggtgcaagtcggtatagtaacg ttctcatcgtatccacacaatgcattttacctgaacacgtacaaagacagacagaccttg ttgaatggcatcaagaatgttccttacaagtcaggtggcacatcgactgatgacgcattg aaattcgtacggacagacagtttcacaacagctcacggtggtcggtttggtgttccaaaa atattggtggtaatgacagacggacaatcaagcgacccgacaggaacggccacggaagct agaatcctgcattacgataatatcaaagttattgctattggtatcggtagcggtgtcaat actaaggaacttaatgcaatagctactgacacccaacattctttcaccgtaccgtcattt gactccctgcaaacaatcgagaaggatattcagacagcaacatgtgtgtctgagaaaatt gatttagtgacatgtgaaagcaaacaagctgatatcgtttttgtccttgatggatcaggc agtgagacagccgtcaattttcagaaacaacttgaatttgtcagtaatgttacaaacaca tttgacataggacccaacgatattcaggttagtcttgtaacattcgacacccacgtgttc aacgagttcttcctcaatgcgtatcataacaagacggatgttataaatgctataatgagt gcaaaatacaatggtggaacgacaaacacagccgaagccttgaagtttgtccgccaaaac agtttcaaacctgagaacggtggccgaggtaacgcagtaaccagacttgttgttgtacta acagatggaaactcgaattcccactattccacaaaaatggaggcaactaatctccaccat gccggagtaaaggtcatatctgttggtattgggtcctcggtgtcgacgacagaacttaca gacatcgctactgatgctaaccacgtgtttaaagttgctaactttaactcgcttgattca atacaaagagagctagaatcggctgcatgcacaacaccatcagaatgcggagacaaacca acagatattgtttttgttttggacgcttcaagcagcgatggtgccgccaactttcagaaa cagttggacttcatgactgactttgtgaaacagtttgatattggaccaagtgatgtccag gtttcacttataactttcagctcatcggcacacagtgaattttaccttaatacaaacaag gataaacctagccttattgctgacatacagtctgcaagataccgcggaggaaccacggcg acgtacgacggtttacgttacgcacgttactaccactttgcgcattatcatgggggacga gctaacgcaactaaattagtcattgttttgaccgacggtcgctcaaatgacgtcagcaga actatcaccgaggctgtccaacttaagaattcaggagcaaaggtcatttcaattggtatt ggttcaaatgtaaatcagtatgaactgaacaccatagcaactgacagaaatcacgccttc actgttggtagcttcgacattcttcatacactgcaggaagaaatcaaagacgaatcttgt ggagaaggaaaaccaaaaccaacaccaaatcccgaatgtggcagccagccggcagatatt gtttttgtgctcgattcttccgccagcgaaggaagttcaaacttccagaaacaggtcgat ttcgtcagggacttcgcttaccagtttgctattggaccacaggatgttcagataagtgtt gtagttttcagcagcggtgcccatgaacagttcccactgaacaagtaccacgaccaagca tctctcttggcggctatctccaggataacatacaacagtggagcgacatatacagatagg gcactgtcttacgttagaactagcagcttcactgcagccaagggagctcgaccgaatgca acagatcttgtagttgttataacagacggacagtcaacccatcctacagaaacttctaaa gaagccatcctgctgaaaaacagagcaaacacaaaagttgtcgcaattggtatcggaaat ggggtagatcacagtgaactggagaaaatagcttctgacagtgcgcatgcgctcgccgtg gcagactttaatgctctcgccaccattaaatcagaacttacattcgtagcttgtcaaacg tgtggcttcatttcaaaagctgacattgtctttgtgctcgacgcctcctcaagtgaaggc actctgaacttccagaaacaactggatttcgtgtcacgtgtcgcaaatgacttccagatt ggacctaaccacgtccaaattggcatgctcacattctctgactatcccaacctggagttt tacctcaaccaatatccagataaatccaccttgctgagtgctatccagaaaactggttac ttaactgggatcacaaacactgatcaagccctgaagtacacccgcgagaacatgttctcc ccaaaacatggcgctcgggatgacgcccagaactacctaatcatattaacggatggcgcc tcatccaacgcaaatctgactctccaacaagccaatctgctgaaaagccaaaacattgat atccttgcgatcggcattggttcaaatataaatcaaaacgagttgaatggtattgggtcc gattctaaccacgtgtttacagtctctacatttgatgcactcaaaacagttcgggcagat attaagaaagcagcgtgtgaagaagtgactactacaactactacaccaatgcccacaaca actatgaagactaccacaacagagcatttcataccagacacaacaacagaacattttata ccagacacaaccactcttggagatgagccacaggcacagaattgtcttcattgtccagga acaatattaagcatttattcgaaagaagacatgtcggtcttaatttcaaaaaatgtttat ttgaaagttttcatctttgttacatgcctcgtctattccaatgcacaaacagatgactgt ggacatagtaaggcggacatagtttttcttctcgatgcttctacgagcgagggtgaaaac aatttcagaaaacaattagattttgtaggaaactttacaaatgcccatgcaataggtaaa gatggattacaggtgggaatagtaacgttttctacgcaacccagaaatcagtttaacctc aacagatactcagataaagcatctcttctcaatgccatacaaaatgtaccatacgcttta ggtgacacgtatacaaacgaggcactgaaatatgtccgacagaatagttttacggccgct cacggagaccgaagtggagtaccaaacattcttgttgtgatgacggacggcgagtcaact atacccacggcaactgtaacagagtcagcactgctacataaaacggatatcacagtagtg gcaattgggatcggaagtcgtatacagattacggagctgaacaccatagcttcagacaga caacatgcatttacagtgccgtctttcgactccctacactccattgaaaaggagatccag aacgttacttgtgtcacagaaaaatctgaaacaacaaccttaccgacaactagcagcact accaccagcactaccaccagcactacaaccgtcaccacaacttcaatcccgtctacaata gcagactgcggacatagtaaggcggacattgtatttcttcttgatgcttctacgagcgag ggtgaaaacaatttcagaaaacaattagattttgtaggaaactttactaaagcccataca ataggtaaagatggattacaggttggaatagtaacgttctctacccaaccccgaaatcag tttaatctcaacacatactcagataaagcatctcttctcagtgccatacaaaatgtacca tacgctttaggtgatacgtatacgaacgaggcactgaaatatgtccgacagaatagtttt acggctgctcacggagaccggagtggagtaccaaacattcttgttgtgatgacggacggc gagtcaactatacccacggcaactgtaacggaatcagcactgctacataaaactgatatc acagttgtggcaattgggatcggaagtcgtatacagattaaggagttgaacaccatagct tcagacagacaacatgcctttacagtggcgtctttcgactccctacaatccattgaaaat gaaatccggaacgttacctgtgttacagagaaattagaaacgacaactttacctacaaca agcactactaccaccagcactacaattgtcaccacaatttcaatccctccaacaattgca gaatgtgctcataacaaggctgacattgtattcctcttggattcctccatcagtgaagga gacgagaactttaaaaagcaattagactttgttggtaatttcacaaaggacaaggaaatt ggtcctgataaggtacaaattggaattgtcacattttcgtcaagcccgcacaatgctttt aatctcaacacatacagcgacaagccttcgctcattcaaggaatacacagcgtcaaatat atgtcaggtgatacgtatacaaatttggcgctaaaatatgttcgagagaatagctttcta gcatcacgtggttctcgcagtggtgtaccaaagattctagtggtaatgacagatggtggg tctacaattccaacagaaacagtaaatgaggctgccaagctgcacaatactgatgtaaag gtaatagcaattggtatagggagtcaagtacagattacggaactgaacaccattgcttca gatagacaacatgcctttacagtgccatcttttgactccctacagtcaattgaaaaggaa attcaaagggttacatgtgttacaaataaagttgtgcaaccaagccctgctgcaatcgta gactgtgttcataacaaagctgacattgttttcttgcttgactcctccaccagtgagggt gaggacaacttcaggaaacaactagactttgtagctaattttactaagggctacgatata ggaccagcagccgtgcaggtgagcattgtggctttctcaaaccaaccgcataacatcttc tacctgaataaatacacggacaaactgtcactgataaatggaatcagaaatgttcattat taccgaggtgatacatataccgaccaagccttgaagtttgtcagagaaaacagtttttta cccgtgcatggatcacgttatggtgtgcccaacattctggtggtgatgactgatggagaa tcaacaagaccgactgcaacagtcattgaggcgaaaacattacattataccgacattaaa gtgatctcaattggaattggtaaccgtgtgaatccgacagagctgaacaaaattgctact gaccacgaacatgcattcattgttccttcgtttgattcgctacaaactatagaacatgaa atacaagcagttacttgtgtatcagaaaaacgtgttacatgcgacaataagagggcggat atcgtttttgttcttcatgcatcgagaaaggacatctttatgactgaattagacttcgtt cggaacgtaaccgacgtgttgagtgtcggatcaggcaatatccaagttagccttgttaca ttcgggagtcaagtttacaacgaatttttcctgaacgaatatacgagcaaatctgatata atgagagcagaactcaacgccagttatatcagcggcgaggctaatactcctatggcgcta gaatttgtgcgcataaacagttttaaatccgagaacggtgctcgtggaaactctgttaca aggttagcaataatcataacagatgaagattcaaacgtgctctatacaacgaaaaatgaa gctgcaaacctacaccacatcggtgtcaagactatctctattggcattgggagttctgta tctcacgctgaactggacaatattgcatcagatcaacgtcacgtgttttctgtaacggac tcgacaaatctaggatcattacaacaagagattgaaaatgttgcatgcacagctacatct ggatgcggagacaaaccaactgatatagtattcatcctggatagttcagccaccgaaggc agagacaacttccacaaagaactggactttatgagtgaattcgtcaaacagtttgatata ggtccaagtgatgttcaggtttctctcattaccgttggatcaagcccccacacagagttc taccttaacgaatataaagataaagcaagtttgatttctgcaattcagacgtcaaggtat ttgggtggtggcacagatctttataatggaataagttttgcccgctattaccatttttcg gcaagccatggtgcccggccaaatgctaatagactggtcgtagtcgtcacagaaggaaac tcgagagacccaagtaggactttatatgaagcccagttactacagaacacaggagcaaag attaccacaataactattggacagaatgtgaatcagtacgaactaacaaacatagcgact gaccgtaaccacgccttctctgttggaagctttgatattctccatacagtactacaggaa gttacagaggaaacatgtgaaggtgcaaaaccattgccagtacctatgacagattgtgga aaagaacaagcagacatagtctttatccttgactcctcttcgagtgaagggagggtccac tttcagacacaattggactttgtccgagattttgtctatcagttcgcaattggaccaaat gcaatacaagtaagcgttgtagtatttagtacttatgtgaaggaagaattcccgctaaat aagtatcatgaccaggcagatttactctccgccatttcaaagattcattttgtttccggg gcatcttcgacggagaaagcccttcactttgtaaggaccaacagcttcttggcaagtaaa ggtgctcgacaaaacgctactgacattgttattctgctcaccgacggtaggtctggtcat cctcaagacacaaagagagaagcactccttctgaaaaatcgaccgaataccaaggttatt gctattggaatcggatctgcggctgacagaaatgaactgcgaacgatttcatcaaacaac gaaagtgcaatacaaataacaaacttcaatgttctaacaacgttgaaaccgcagctgact tatctggcctgtcatacttgtgacttcttttctaaggctgatattgtgtttgcaatcgga gtatccaatcagagtgcgtttaattttcataaagtcatcgatttcgtatctacaatcgtc aacgaccttcagataggtgtcaacaatgtccacgtcggagttctaacattctcggggtct ccgactaaagaaatcagcttgaatcaatacaccagtaaagcaactcttctcagcgaaata cagaagataggttaccatagcaacggcaactcgaatgtaaatgaagcgcttgagtttgca caagacaacatgttcccgagttcacgtgttgatagatatacagtccagcgcgaacttatc ataataactgatggttttgtatcaaacacaacaataactacgaagcaagtaaacttgata aagagtgatacaaacattatagttgtagggataggatctagagtccacataagtgaaatg accagaattacttctgacaaagaccatgtatttgcagtaaacacattcgatgatttgcag aaaattcggaatgatgtgaagatggcctcttgtgaagactttgcaacaacagcttcaccg actactaaaaccagtacagtgatacctaccccgaaagcacagtga

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