Mercenaria mercenaria (northern quahog): 123522965
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Entry
123522965 CDS
T07835
Name
(RefSeq) DNA polymerase iota-like isoform X1
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
123522965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123522965
Enzymes [BR:
mmer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
123522965
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
123522965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
UBM
IMS_HHH_1
IMS_C
HHH_5
DNA_pol_lambd_f
Cdd1
Motif
Other DBs
NCBI-GeneID:
123522965
NCBI-ProteinID:
XP_045156448
LinkDB
All DBs
Position
8:complement(16882562..16914754)
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AA seq
817 aa
AA seq
DB search
MESDEDEEEWTKPVDQTIKDTDVTCSQQRTENHSHVILHIDIDCFYAQVEMLRNPELRNK
PLGIQQKYIIVTCNYVARERGLTKLMTIKDAREKCPDLVLVSGEDLTNYRHMSYKISNYL
QKYCPLVERLGFDENFLDITELVNDRINYQSVRCPTDMKGHVYMSDSHAKGTCTCGCRER
LAVGSHIAEEIRAGLLKELGITCCGGIAHNKLLSKLVAGTYKPNQQTTLFPDKVNILMSS
LNSVRSIQGIGHTTARRLKELGVVTVTDLQNAETSVLDEEFGHTSVETMKKLCIGVDDSP
VIAFGLPQTLSDEDSFKKCSDSEDAKARMRPLINSLLQRLLEDGRRPQTLRLSVRKMLET
NRYSNRESRQCNIPPSLFNKFSADNMAHTSIQLEALAYSLFTKMVDIKSPFHLTLINVAF
AKLEQKSSNDISNFFSPKKSPNSRSTAQCSSRKEDCDPSIKVQSTPFELKTKSSKSEPEN
NSSPHRSASTKSVSGIQKWLVKQPAGNESNYKDLFDLATNSANTEDCRKDADTLDVYESI
HRNRALKRQSVDNSCDATEENFTKRKRLSVSDGSGNPDLPSNFTELLPPDLDRSVFLELP
HHIQKDILANAATYHDSNKLKPGTPAQATNLNKGIPKTSVVMPSACSPTLDNEEIGKTRN
VHSETKVITNNVKIINHTSSSETEVEHVAEDERSKTCRLFKKSSVNRKDVVQDQQSLRYL
GKNYVKAQQQDGCTSGRQSEGHLENNPEEVSVPDGIDHAVFASLPPEIKEELIRQWKIEK
PRKGVNSGKSKSPDKHYFKSPKPSASNSITDYFSKRT
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgacgaagatgaggaagagtggacaaaaccagttgatcaaacaattaaagac
acggatgtaacgtgcagtcaacagagaacagaaaatcactcacatgttatactgcacata
gacatagactgtttttatgctcaagtggaaatgcttagaaacccagaattgaggaataaa
ccactaggtattcaacagaagtatattattgtgacatgtaactatgttgctagagaacgg
ggactcaccaaactaatgaccattaaagatgctcgagagaaatgtccagacctggtcctt
gttagtggagaggacctgacgaattacagacacatgtcttataaaatttcaaattatcta
cagaaatactgcccactggttgaaagactgggttttgatgagaactttttagatatcaca
gagcttgtgaatgacagaataaactatcaaagtgttcgttgtcctacggacatgaaaggt
catgtgtacatgtcagatagtcatgccaaaggaacttgcacgtgtggttgccgggaacga
ctggctgttggttcacatattgctgaagagattcgagctggtctccttaaggagctcggc
attacctgctgtggcgggatcgcccataacaaacttttgtcgaaactggtcgctgggact
tacaaacctaaccaacagacaacactgtttccagataaagtgaacatcctgatgtcaagt
ctgaacagtgttcgcagcattcaaggtattggtcacacaacagcaagacggttgaaggag
cttggtgtagtcactgtcacagatctacagaatgctgagacatcagttttagatgaggag
tttggacatacatcagtggaaacaatgaagaagctgtgtataggcgtagatgatagccct
gtaatagcatttggtcttcctcagacattgagtgatgaggactctttcaagaagtgcagt
gacagtgaggatgccaaggcaagaatgaggccattgataaatagtttattacaaaggctt
ctagaagatggaagaagaccccaaacacttcgcctgagtgttagaaaaatgttagagaca
aacagatacagcaatcgtgagagtcgtcagtgcaatataccgccttctcttttcaacaag
ttctcggcggacaacatggcacacacaagcattcagctggaagctttggcatacagttta
ttcacaaagatggtggacattaaatctccatttcacttaacactgataaatgttgccttt
gctaagctcgagcagaaatcttcaaatgatatttctaacttcttttctccaaagaaaagc
ccaaactcaagaagtaccgcgcagtgtagtagcagaaaagaagactgtgatccgtcaatc
aaggtacaaagtacaccattcgaactgaagaccaaatctagcaagtcagaaccagaaaat
aacagtagccctcacagatctgcaagtacgaaaagtgtatctggtattcagaagtggctt
gtaaaacaaccagcaggcaatgagtcaaattataaagatttatttgacttggccacaaat
tcagctaatacagaagactgccgcaaagatgcagacacacttgatgtgtatgaatctatt
cacagaaatagagctctaaaaagacagtcagttgacaatagttgtgatgcaactgaagaa
aactttacaaaaagaaaacgtttaagtgtctcagatggttctggaaaccctgacctacca
tcaaatttcactgaattactaccacctgatttagatagaagtgttttcttggaacttcca
catcatattcagaaagacattctggctaatgcagccacttaccatgattctaacaaactg
aaaccaggcacaccagctcaagcaacaaatttaaataaaggcattccaaaaacaagcgta
gtgatgcctagtgcatgctcgcctacactcgataatgaagaaataggcaaaactcgaaat
gtgcattcagaaacaaaagtaattacaaataatgtaaagataattaatcatacaagcagt
agtgaaactgaagttgaacatgttgctgaagatgaaagatcaaaaacttgtagattattt
aagaaaagcagtgtaaatagaaaagatgtggtccaggatcagcaaagtttgaggtatttg
ggtaaaaattacgtaaaggcacagcaacaagacggctgcacttcgggcaggcaatctgaa
ggccatttagagaataaccctgaagaagtttcagttccagatggtatagatcatgcagtg
tttgctagtttacctccagaaattaaagaagaattgatcagacagtggaaaattgaaaaa
ccaaggaagggagttaactcggggaaatcaaaaagtccagataaacattactttaagtct
ccaaaaccatctgcctctaatagcattacagattacttttcaaagagaacataa
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