Mercenaria mercenaria (northern quahog): 123522990
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Entry
123522990 CDS
T07835
Name
(RefSeq) polycystic kidney disease protein 1-like 3 isoform X1
KO
K04988
polycystin 1L2
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmer04040
]
123522990
04091 Lectins [BR:
mmer04091
]
123522990
Ion channels [BR:
mmer04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123522990
Lectins [BR:
mmer04091
]
C-Type lectins
Others
123522990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
PLAT
Methyltransf_FA
Sushi
GPS
Ion_trans
Motif
Other DBs
NCBI-GeneID:
123522990
NCBI-ProteinID:
XP_053405407
LinkDB
All DBs
Position
8:15896297..16144175
Genome browser
AA seq
2471 aa
AA seq
DB search
MVWYTVIQLFFSITSVCFGNSLKTPLFEVSGMSDQLPNLCAYNYQVDTVNINIEIKIAAC
GSGVSDIVTSVNWTLYQLQRSDDYEINKAAPHKTAHTQTPAYTWTGLQEGDLSIYAVVVE
LQLQDFQDDITIMGYLVVACGEEVGNYSEGNCRTVRDDVTNLAGITTMIWELRKCDEVLS
SYKATSREEYILDASSAVGEIYGDNSYLQVDTTVIFQVKCESDAYVLLQEDVTDKDKNIV
EVTIGFGGNKHKSVLTKERNSLGNSPLSEHIETNILSNAEFHYFWISFAENEVRVGKGHI
LYVDQFLEYDNLNHDINYLSFGNGDGVSGSWKFDIDLCHLPLDQGSCSQSYWGYSHLSSS
CVDTCGNGKNCFQTKALCEQSCQVSTTAANCNELWHAANGGLPNGTYNVTNANGEDFTVY
CQFYSGYGYTFVSKNTEVDVNVTYLLDEREHVVIRHKRSDGSQYTAEMEQLSRLSDTPLL
IQFNGQTGYSTPINQAMGPYIYIGFIPASDVYTEAEEGWKCNGQEITFTNCDGNPNSYIA
FFFNKENASYTSNQGGYSSIIFCWYELATQVSSNEYLPDEFFTPYFEIHHGGCGGFGRGD
TEPDIIGATVGVKFVTVCATPSDITNGTMSYNGTSVGSTVTYSCDSGLVMTRGDATRTCN
DTGGWSGLLPVCGDFSIGIRCTKNCLEKKSPQSQLKFEVDCDACTGESVPSYSWSADECN
AVDIQTCNGPNLKTANKKEFKLPKGKVNPKMIVKVQVIVQLNNGNEANASKLIEYSPIPV
AGDCFVEPVSGYTLLTDFNITCINFTVEGNYSLTYIMKSKTINEWSKGPKFEMGQRRTAI
VKLRVGDPDMEHRLFIMVRGKLVESGAFANISKIVQVLPADQAPEGSNVIAVARSMLLVT
NNSQPSPIDEMIAAGNQAEAVQNLNVISSALTPANASVVNDTEREEKTKIRTTVVESLGK
VNVSSFDTVSSVAQTLTEVTKVKTELSESTQNLAADLFDNLADSLEHYSDETSMSDIVDS
AGDIFTGVTQLLDIKVDEGSKQLLQDKSDITDSTQDDAKLENVKNSTGKLLNTISKISTT
LLSGHKSGDPPIVIQTESMSVQVEKVEKSALFGHNLSVGAGNETDVATLEFPSVLDGLDG
DITDLGLQVLHMKKNPYVWDKTAAEVNMEVLSVELTSDTTEVTVTNLTQPVKVTLKAPET
EKPPYSTLQLHIIKSGSNLTYNLSMTNILNSNFTIPEGKTTILSLFSFFQIRHFKIYIDE
YEKPTFDKVKELGVSYPDQADELSKNFSKFELTNERAENSSLIFFTYNKSMSANYTGTYF
LAVGLDLQNNSTIEDLQDLDTECIGNDTLTDCETVVEVTLQIDTTTLACTYWDESSQAWS
NQGCEVSPLSTKEKLECLCTHLTAFSGGVFVLPNFVDPIGDAALFLTFFDNPVVVTTVVI
VWVLYFFLIHWARQSDRRDQEQVGVIAVDVDAVNKYMYLVCVVTGWWTDAGTTANVFFYM
KGMNGSSARIKLTTSAKLCFQTGYEDWFLVTTEESLGDLKNVILWHDNSGTNPHWYLSQI
FVKDLQEKKSWTFIYNDWLAVDRGSSLLTKASVSAISKEELKFKQKHNFMVKTTQDLRDS
HLWISIFSKPARSTFTRVQRVTCALSLLLTTMLTNIMFYGIPTDDPDDQVGGSRGVVISL
SSIVIGIQSSLIMFPVNVIIMQMFLKLKQRPEKEEIDKKSQSYIQSLYDRVSHITTDVLL
NLASGVPPPACKEEQNSQSDCSFATVDETVKVNLSTDSNGASHQVTPFESATSNVLISGT
HSSGKYNIASPKPESSRVTVLSKSKQTGKILPWWFLYISWFLVLSVSLICSYFVMLYGLK
YGYQRSVEWLVSFLTGFSQSALITQPLKVLAVAIIITLIFKRTVEFEDYGPEVRLDEDTM
FVNSVNKTEEAHIPFSQPLSVNLLQKIKERVQLEWLMNITLRDIGLYIIYVAVVCIVVHG
HRDIKEAYYNSLAIEDVLVNPGCIILYQCFFLANAENMQNFYRYMYEVAIPNLADMSIAD
HEYATPGSSHFLVGPWRLRQLRIDRGTCGKGADDLYRQFNMNVKECSGPYWLGDEEKRNF
RNSWSEVLAEASDPPTRWTYQSAWKLKTIPFKGKLATYSGGGYIITMPSNSSLHEGIIKD
MWNSDWIDERTRAIFLEFTLYNPNADLFSVVIILFEFSNNGVIVPYHQIFSTRLYHYSTG
FANFVLFCECLFLIFNISFTYIEWKKFGVLGRKKYFEDYWSYIEIIQIALAFSVVGLFFQ
RLVSVNGVMKDFRASDGSTFISFYTAVSWDFILGYVMAFLVALVTLKAIKLLKFNKRTYM
VADTISHSKSSIASFMFLALLVTIAFGHFATMAFGRMMDDYRDMMTSLITIFNFALGISD
FPGLQETNRILGPVYFCIFVFVITFIFLTVFVAILNFGISESKALFEKRQNKFELLEYVV
TKLKLVLNVEN
NT seq
7416 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggtacacagtaattcagctgttcttctcgattacttcagtttgttttggaaat
agcttaaagacaccattattcgaagtgtctgggatgtctgatcagctaccaaatctgtgt
gcatataactatcaagtagacacggttaatatcaacatagagataaaaattgcagcttgt
ggcagtggagtcagtgatatagttacatctgtaaactggacattatatcaactccagcgt
agtgatgattatgaaataaataaagccgctcctcacaaaactgcacacactcaaactcca
gcctacacttggactggtttacaggagggtgatttgtctatatatgctgttgtggttgaa
ttacaactacaagactttcaggacgacatcacaataatggggtatcttgttgttgcctgt
ggggaagaggttggaaactatagtgaaggaaattgtagaactgtacgtgatgatgtgacg
aatttagctggaattaccacaatgatatgggagttgagaaaatgtgatgaagttctgtct
tcttataaagcaacatcaagagaagagtatattcttgatgctagttctgctgttggtgaa
atatatggggataattcatacttacaagtggatacaacagtaatttttcaagttaaatgc
gagtcggatgcctatgttctactgcaagaagatgtaactgataaagataagaacattgtt
gaagttactattggttttggaggaaacaagcataaatctgttctcacaaaagagcgaaac
agtttgggaaacagtccattatcagagcatattgagacaaacattctttccaatgcggaa
tttcactacttttggatcagttttgctgagaacgaggtacgtgttggtaaaggccacata
ctgtatgtagatcagttcttggaatatgacaatctgaaccatgatatcaactatttatca
tttggaaatggtgatggtgtgtcaggttcctggaaatttgatattgatttgtgccatttg
cctttggaccaaggatcatgttcgcaatcttactggggatacagtcatctatcctcatcc
tgtgttgatacctgtggtaatggtaaaaactgttttcagacaaaagctctttgtgaacag
tcatgtcaggtttccaccactgcggcaaactgtaatgaactgtggcatgcggctaatgga
ggtcttccaaatggaacgtacaatgtaaccaatgccaacggagaagatttcactgtatat
tgccagttctatagcggatatggatacacatttgtttctaaaaacacagaagtagatgtc
aatgtgacatatctgttagacgaaagagagcatgtagttatacgtcataagagatcagat
ggcagtcaatacactgctgaaatggagcagttgtcaaggctttcagacaccccacttctt
attcagttcaatggtcagactggttactcaacacctataaatcaagcaatgggtccttac
atatacattgggtttataccagcttcagatgtatatacagaagctgaagaaggttggaag
tgtaatgggcaggagatcaccttcaccaactgtgatggaaatccaaacagctatatagca
ttttttttcaacaaggaaaatgcttcctataccagcaaccaaggtggctacagttccata
attttttgttggtatgaattggcaacacaagtttcgtcaaatgaatacttaccagatgag
ttctttacgccatattttgaaatccatcatggcggttgtggtggatttgggagaggtgat
actgaacctgacattattggtgccactgttggtgtaaaatttgtgactgtgtgcgccaca
cctagtgatattacaaatggaacaatgtcctacaatggaacaagtgttggcagtacagtg
acctactcatgtgacagtggccttgtcatgacccgtggtgatgcaactcgtacatgcaat
gacacaggaggatggtccggactcttaccagtttgtggagattttagcattggcatcaga
tgtacaaaaaactgcttggagaagaaaagtcctcagtcgcagttaaagtttgaagttgac
tgtgatgcatgcacaggtgaaagtgtaccgagctattcatggtcagctgatgaatgtaat
gcagtggatatacaaacttgcaatggaccaaatctcaaaacggccaacaaaaaggagttt
aaacttccgaagggaaaagttaatcctaagatgatcgtcaaggttcaggttatagtgcaa
ctgaataatggtaatgaagctaatgcaagcaaactgattgaatacagtccaatacctgtt
gctggagactgttttgttgaaccagtgtcaggatataccttattgacagattttaatata
acatgcatcaactttactgtagagggaaattacagcctcacatatataatgaaatcaaaa
acaataaatgaatggagtaaaggaccaaagtttgaaatggggcaaaggagaacagcaata
gtgaagttacgtgtaggagatcctgatatggaacatagattgttcataatggttagaggc
aaacttgtagaatctggagcatttgcaaacatttcaaagatagtgcaggtacttccagca
gaccaggccccagaaggtagcaatgtgatagctgtagccagatctatgctccttgtgaca
aacaattcacagccttcacctattgatgaaatgattgctgcaggaaatcaagctgaggca
gttcagaacttgaatgttatttcttcagcactaactcctgcaaatgccagtgttgtaaat
gacactgaaagagaggagaagacaaaaatccgtacaacagttgtggaaagccttggaaaa
gtaaatgtgagcagctttgatactgtatcttctgtagcacaaactttgactgaggttaca
aaggtgaaaactgaacttagtgaaagtactcagaaccttgctgctgacctgtttgataat
ttagcagacagtttggagcattacagtgatgaaactagtatgtcagacattgtggattct
gctggagatatatttactggcgtgacacagctgcttgatatcaaagtggatgagggtagc
aagcagttgctgcaagacaagagtgacatcactgacagcacgcaagatgatgctaaattg
gaaaacgtaaaaaattcaacagggaaacttctcaacacaatcagtaaaattagcactacc
ctcctatctggtcataagtctggagatcctcccattgttatacagactgagagcatgagt
gttcaagttgaaaaagtagagaagtcagctttgtttggtcacaatctgtctgtaggtgct
ggcaatgaaacagatgtagcaacactagagtttccttccgttctagatggtttggatgga
gatataactgatttaggactgcaggtgttacacatgaagaaaaacccttatgtttgggac
aaaacagcagcagaggtcaatatggaggtgttatctgtagaactgacatcagatactaca
gaagtcacagtaaccaaccttactcagccagtaaaagtgacacttaaagcaccagagact
gaaaaacctccatacagcacacttcagcttcatataatcaaaagtggcagcaatttaaca
tacaatctttcaatgacaaatatactgaactccaacttcaccatcccagagggaaaaaca
acaattttgtcactgttttccttttttcagataagacattttaagatctatattgatgaa
tatgaaaaaccaacatttgacaaagttaaggaattgggagtttcatatcctgatcaagct
gatgaactaagcaaaaacttttccaaatttgaactaacaaatgaaagagctgaaaactca
agccttattttcttcacatacaacaagagcatgtctgcaaactatacagggacatacttt
ctggcagtgggtttggatttacaaaacaactctactatagaagatttgcaagatttagat
acagagtgtataggaaatgatactttaacagactgtgagacagtagtggaggtcacactg
cagattgataccacaactctagcttgtacatactgggatgaatcatcacaggcctggagt
aatcaggggtgtgaggtgtctccactttcgacaaaagagaagttggaatgcttgtgtaca
catttgacagcattttctggtggtgtgtttgtgctaccaaactttgtagatcccattggt
gatgcagcattgttcttgacattctttgacaatccagttgtcgtgacaactgttgttata
gtctgggttctctatttcttcctcattcactgggcacgacagtctgataggcgggatcaa
gaacaggttggagttattgctgtagatgtggatgctgttaacaagtacatgtatcttgtc
tgtgttgtaactggatggtggactgatgctggcaccacagctaacgtcttcttctacatg
aaagggatgaatggatcaagtgcaaggataaagttgacaacatcagctaaactatgtttc
cagacaggatatgaggactggttccttgttactactgaagaatctctgggagatttaaag
aatgtcatactttggcatgataattctggaaccaacccacattggtatttgagtcaaata
tttgtcaaggaccttcaagagaaaaagtcttggacattcatttataatgactggttggct
gtagacagagggtcttctctgctgacaaaagcttctgtttctgcgataagtaaagaagaa
ctaaagttcaaacagaaacacaacttcatggtaaagacaacacaagaccttcgagattct
catctctggatcagtattttctccaaaccagctcgtagcacctttaccagagttcagcgt
gtgacatgtgcactgtctctgctgttgaccactatgttgacaaacattatgttttatggt
attccaacagacgatccagatgaccaggtcggagggtcacggggtgttgtaatttctctg
tcatctattgtcattgggatacagagcagtctgataatgtttccggtgaacgttattata
atgcagatgtttctcaaactgaaacagagacctgaaaaggaagagatagacaagaagagc
cagtcttatatacagtcactgtatgatagagtgtctcacatcacaacagatgttctgctg
aatctagcttctggtgtacctccccctgcatgtaaagaggaacagaatagtcaatcagat
tgttcatttgctactgtggatgaaactgtcaaagttaacttgtcaactgactcaaatggt
gcatctcaccaagttactccttttgaaagtgcaacgtcaaacgtgctcatctctggaact
cacagttcaggaaaatacaacattgcaagtcccaaaccagagtcttccagagttactgtt
ttaagcaaatctaaacaaactggcaaaattttaccatggtggtttctttacatttcctgg
ttcctggttctatctgtaagccttatctgctcctactttgtcatgttgtatggattgaag
tatgggtaccagcgcagtgtggaatggcttgtctctttcttgactggattctctcaaagt
gctcttatcacacagccattaaaggtactcgcggttgccataataataacattgatcttt
aaaagaacagtggagtttgaagactatggacctgaagtaaggcttgatgaagatacaatg
tttgtgaattctgtgaacaagacagaagaggcacatataccattcagccagccattatct
gttaatttgttacagaaaatcaaagagcgagtacagttggaatggctaatgaatataact
ctgcgggacatagggctgtacattatctatgtagcagtggtttgtattgttgtccatggt
catcgggatatcaaggaggcgtattacaattcattggctattgaggatgtgttagttaat
cctggatgtatcatactctaccagtgcttcttccttgctaatgcagagaatatgcaaaat
ttctacagatatatgtacgaggtggcaattccaaatttagcagatatgtcaatagcagat
catgaatatgcaacaccaggctcaagtcatttcttggttggaccatggagattgcgacaa
cttcgtattgaccgaggaacgtgcggtaaaggagccgatgacctttaccgccagtttaac
atgaatgttaaggagtgttctggaccttactggctcggagacgaagagaaaagaaatttt
aggaattcttggagtgaggtccttgcagaggcttctgatccaccaacaagatggacttac
cagtcagcatggaaattaaagacaataccttttaaagggaaactggcaacatactctggt
ggcggatatatcattacaatgcctagtaattcatctctccacgaaggtattatcaaggac
atgtggaattctgattggatagatgagcgaacaagagcaatattcttggagtttaccttg
tacaacccgaatgctgacctgttcagtgtagtcatcatcctgtttgagttctccaacaac
ggcgttattgtaccctaccatcagatcttctcaactagactctatcattattctactggc
tttgctaattttgttttgttttgtgagtgcttgttcctcattttcaacatcagttttacc
tatattgaatggaagaaatttggagtacttggtagaaagaaatactttgaagattactgg
agctatatagagatcattcagatagcgttagccttttctgttgttgggttatttttccag
agacttgtctctgtgaacggtgtgatgaaagacttcagagcaagtgatggcagcacattt
ataagtttctatacagctgtatcctgggacttcattcttggatatgttatggcttttctt
gtggctttagtcactcttaaagccattaagctgctcaaatttaacaaaaggacttacatg
gttgctgacactatttcacattctaaatcaagtattgccagttttatgttcttggcatta
cttgttacgatagcattcggtcattttgcaacaatggcatttggaagaatgatggatgac
tacagggacatgatgactagcttaattactattttcaactttgctcttggaatctcagac
ttccctggcctgcaggagacaaacagaattctaggaccagtctacttctgcatctttgtt
tttgtgataacatttattttccttacagtgtttgttgctattttaaactttggtataagt
gaatcaaaggcattatttgaaaaaaggcagaataaatttgaattgcttgaatatgttgta
acaaagctgaaattagttcttaatgttgaaaactga
DBGET
integrated database retrieval system
