Mercenaria mercenaria (northern quahog): 123523494
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Entry
123523494 CDS
T07835
Name
(RefSeq) ATP-dependent DNA helicase PIF1-like
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmer03032
]
123523494
03029 Mitochondrial biogenesis [BR:
mmer03029
]
123523494
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
123523494
DNA replication proteins [BR:
mmer03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
123523494
Mitochondrial biogenesis [BR:
mmer03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
123523494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
PH_LRR1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
UvrD_C_2
AAA_16
ABC_tran
Mg_chelatase
AAA_7
PhoH
Herpes_Helicase
AAA
AAA_5
T2SSE
Motif
Other DBs
NCBI-GeneID:
123523494
NCBI-ProteinID:
XP_045157095
LinkDB
All DBs
Position
3:51866577..51888080
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AA seq
640 aa
AA seq
DB search
MDLHTITCSATLEELNAKGETLRKMQHKNVTFTLGRNEFRDVILCVNFPSKREMKYTLRD
VLVHKKFVKDGKATIKLTTDNTQVMMSNCAPDKLIMFLKTMTTKLECLKKKGFVSERLKW
KSDLPRTFDEISPLTMRDLKEAHEAKAKLAEKCDLYTPKGKRKRCASDDKENQQPPASKM
ARKLICNDGKGTIGLQASSLPEAITNPVKLTKEQTTVLESVKSGQNIFFTGSAGTGKSFL
LRRIIGALPPQHTYATASTGVAACHIGGTTLHQFAGIGSGQAAIEQCIQLASRQQVAQQW
RKCNHLIIDEISMVDGDFFDKLETVARVIKKSDKPFGGIQLIICGDFLQLPPVTKGSEKR
KFCFQSKSWSKVIQLKLELTVVKRQSDSKFIDILQNIRLGRCPDYVYTTLRATAKNNIQR
EGILATQLCTHKEDVNQINNFQLKKLTGPSKRYEATDSEEAYLKQINYLCPVPATLELTV
GAQVMLAKNVDVSQGLVNGARGVVVGFEKGGEGLPVVKFLCGQEVTVKPTRWTFKLAGGV
FLSRKQVPLKLAWAISIHKSQGMTLDCVEISLSKVFESGQSYVALSRAKNLEGLRVLDFD
KKCVRSDPDVLKFYHRMSLKQKMMDGSIEQESGMKRPKHW
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggatcttcatacaataacttgctcagcaactttagaggagttgaatgctaaaggtgaa
acactcagaaaaatgcaacataagaatgtaacattcacactaggcaggaatgaattcaga
gatgtcatattatgcgtgaactttcccagtaaacgtgaaatgaagtacactttaagagat
gtattggtgcacaagaaatttgttaaggatggtaaagcaaccattaaacttaccaccgat
aacacacaggttatgatgtcaaactgtgctccagataaattgataatgtttttaaagacc
atgacaacaaaattagaatgcttgaaaaagaaaggatttgtaagtgagaggctcaaatgg
aagtccgatcttccaagaacatttgatgaaattagtccactgactatgagagacctgaaa
gaagcacatgaggccaaagctaagttggcagaaaagtgtgatttgtacacgccgaaagga
aagcggaaaagatgtgccagtgatgataaggagaaccagcaaccgccagcaagtaaaatg
gcgaggaaacttatctgtaatgatgggaagggcacaataggattacaagctagcagttta
cctgaggcaatcacaaatcctgtcaagttaactaaggagcagacaacggttctagaaagt
gtgaaaagtggacagaacattttcttcactggtagtgcaggaactggaaaatctttcctt
ctcagaagaattataggtgcgttaccaccccagcacacatatgccacagctagtacagga
gttgctgcttgtcatatagggggaacaactcttcatcagtttgcaggtataggatctggt
caggcagctatagaacagtgtatacagctggcatccagacaacaagtggctcaacagtgg
agaaaatgtaatcatctaatcattgatgagatttctatggtcgatggagatttcttcgat
aaactagagactgtggcaagggtaatcaagaagtcagacaaaccatttggtggcatacag
ttgatcatctgtggagattttctacagttgccaccagttaccaaaggatctgagaaacgg
aaattctgctttcagtcgaaatcctggagtaaagttatacagctgaaattagagttaaca
gttgttaaacgacaatcagacagcaagttcattgatattctacaaaacattagacttgga
agatgtccagattatgtatacacaacattacgtgctacagcaaagaacaacatacaaagg
gaaggaatcctagcaacccagttgtgtacacataaggaagatgtcaaccagatcaacaac
tttcagttgaaaaagctaacaggtccgtccaagaggtatgaggcgacggacagcgaagag
gcatacctgaaacagataaactacctctgtcctgtccccgccacgctggaactgactgtt
ggggcacaggtgatgctagccaaaaatgttgatgtatcccagggactggtcaatggggct
aggggtgtggttgtgggatttgaaaaaggaggagaaggtttaccggttgtgaagtttcta
tgtggccaggaagtgactgtcaaacctacaagatggacatttaaattagctggcggtgtt
ttcttgagtagaaagcaagttcctctcaagcttgcctgggcaatatcaatacataaaagt
cagggtatgacgctggactgcgtggagatctcactgtctaaagtatttgaatcaggccag
tcatacgtagcactctcccgtgcaaagaaccttgaaggactacgagtactagatttcgac
aaaaaatgtgttcgctcggatccagatgtactgaagttctaccatagaatgtcattaaaa
cagaaaatgatggacggaagtatagaacaagaaagcggcatgaagcgacctaaacattgg
tga
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