Mercenaria mercenaria (northern quahog): 123523705
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Entry
123523705 CDS
T07835
Name
(RefSeq) leucine-rich repeat-containing protein 7-like isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mmer04990
]
123523705
Domain-containing proteins not elsewhere classified [BR:
mmer04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
123523705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
PDZ
LRR_LRWD1
PDZ_2
LRR_13
PDZ_6
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
123523705
NCBI-ProteinID:
XP_053395529
LinkDB
All DBs
Position
3:103220929..103309241
Genome browser
AA seq
1290 aa
AA seq
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MAKLFVRKCPCLRPKIEEDVKVLDYRHCSLNDVPGEVFNFERTLEELLVDSNQIKDLPRE
LFYCHGLRKLSLSDNEIKQIPAAIGHLISLENLDLSKNGVIDIPENIKTCKYLQIVDASV
NPLGKLPDGFTQLLNLTQLYLNDTFLDYLPGNFGRLSKLKILEIRENHLKTLPKSFSRLV
ELEKLDIGQNEFSELPDVIGSLSSLLELWCDNNQVQSITPTIGNLKQLMFFDGCKNCLQT
LPSEIEGCISLADLHLTTNQLQSLPDSIGELGNLTTLKVDNNCLRELPHNLGGLSALSEL
NVSANELRELPSSLGLLRYLRTLYADENELEFIPAELGSCSGITVLSLRSNKLSYIPDEI
GRIPRLRVLNLSANQLRCLPFTIVKCKELQALWLSENQTRPLITLQSEHEPDTGRKILTC
YLLPQRPLQDSGDHGGDTDSFHASMWEEERRNRQQIHFEFGDDSDVDGSLIRQPTPYPKE
MREKARHLKNLALRQQMSNGSSVRQGEDNPAYEERVYLILRRNKASSPSMEHLMLINQEG
DGIDGRMRDSRGHKPGSPSIHDPFTLYKYDKEKLAKDKARMQQRHSQSYENDDDKRSHRK
HGSRENSPAPSDRSSRKGKERKSLITAADDDDGGFQGPRVSSLGSTPDIPSAMNDRVPST
KFTYCSPAELSQNLSLRSDNPRSHSSHGNHPRSHRHRRMRDYDSDTGYRSDQELIKFRRQ
QQQMYQRVNDNFSEIVPVTRPKGRRRDGYSSDLEGYSQRSMGVAHHETSAIDNRNFPNRN
NSLTRSFTYDGNQQQSPNKSQSQYSQSETVGNDELYEQNMVDPNLNHYPSSSPSPLQRRN
IIDQSTPLSPNSARSNYNKKDSEFELKKDLFNAQDQHRADGIIDPENRYMPNTSAQSQGP
SREDNRPVPPYKPAPPYPSSPGQRQLPQTPNRTSPYGVSLYDKQIRNSPMKDFHQRMPDI
QESRDSNTSLNRSRSQLNNGNSDLDPQDYRTSESYSRNNYMDMQNVHSDSPRTSTSDSAN
VSRTFIGAHQGDVTSASSKDSGNYSYHDRTLGESPVNLRNSPLSGLQERRGSRNSPLDYV
YDPRRNFDRYDNSFREPATVHIPTRYDDIAMYKSDEPPSQVSSSTDSGYGHNLIEKMLES
QRFSGNSKGSPSPDHFNSDSNTSSSHQEGIGQYSRGATPINNPDMPSRDGSNQGQRFDRF
RVTITKNPGLGFSIAGGKGTYGNPFRPTDLGIFVTKIQQGGPAASTLRRGDKLLEVNGKD
FTGIEHTQAVNVLKTTGSTVQLCVEREITS
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttgtttgtgaggaaatgtccgtgtctacgaccaaagatagaggaggatgtt
aaagtgttggattatagacattgtagtttaaatgatgtgccaggagaggtgtttaatttt
gaacggactctagaggaattactggtggattccaaccagatcaaggatttacctagagag
ttgttctactgccatggactgcgcaagttaagtctcagtgacaatgagatcaaacagatc
ccggcggccatcggtcatctcatcagtcttgaaaacctcgatctcagtaaaaatggagtt
atagatataccagagaatatcaagacatgtaaatatctacaaattgttgatgccagtgtc
aacccgcttggaaagttgccagatggattcacacaacttctcaacttgacacagctctat
ctaaatgatactttcctcgattacctccctggaaactttggcagactgtcgaagctgaag
attttggaaatcagagaaaaccatttgaagacgttaccaaaatctttctctcgtcttgta
gaactggagaaacttgatattggacaaaacgagttcagtgagctgcctgatgttatagga
agtttatcaagtttgttggaactatggtgtgataataatcaagtacagtctatcaccccg
actattggcaacttgaagcagttgatgttctttgatggctgcaagaactgtctacaaacc
ctaccatcggagatagaaggctgcatttcattggctgatctccatctgacaaccaatcag
cttcagtctcttccagattctataggtgaactaggaaatctcacaacacttaaggtggac
aacaactgtcttcgtgaacttccgcacaatttgggagggttgtctgcattatcagaattg
aatgtgagcgcaaatgaattacgagaactgccatcaagcctaggtcttcttagatatcta
cgtacattgtatgctgatgaaaacgagttggagtttatccctgcagagcttggtagttgt
agcggtattacagtgctgtctctgcgtagtaataagttgtcctacataccagacgagata
ggacgtattccacgtttacgtgttctcaatcttagtgctaaccaacttagatgtcttcca
tttaccattgtaaagtgtaaggaattgcaggcactgtggctgtcagaaaatcagacgaga
ccactgattaccctgcagtcagagcatgaaccagataccggacgcaaaattctcacatgt
tacctcttgccacagagaccattacaggattcaggtgaccatggtggggatactgacagt
tttcatgcctcaatgtgggaggaagaaagacgtaacagacaacagatacattttgagttt
ggtgatgactctgatgttgatggaagtcttatacgtcaaccaacaccgtatccaaaagag
atgagagaaaaagctcgtcatctaaaaaacctcgccctcagacaacagatgagtaacggt
tccagtgtgcggcaaggggaagataaccctgcttatgaagagagagtctacttaatactg
agaagaaataaagcgtcgtcaccatctatggagcatcttatgctcattaaccaagagggt
gatggtattgatggaagaatgagagactcgcgcgggcacaaacccgggtcgccgtctata
cacgacccattcactctgtataaatatgacaaggagaagttggcaaaagacaaagctcgg
atgcagcaacgacattctcagtcttacgagaatgatgacgacaaacgttcacatagaaaa
catggaagtcgagaaaactcgcctgcaccatctgatcgcagttcaagaaaagggaaagaa
aggaaatctctaatcacagcagccgatgatgatgatggtggttttcaagggccaagagtt
agctcccttggatcaacaccagatatcccatcagcaatgaatgatagagtaccatctacc
aagttcacctactgctctccagctgaactgtctcagaatttatctctcagatctgacaat
cccagaagtcacagctcacatgggaatcacccaagatctcatagacatcgtagaatgcga
gattatgactctgatactggttacagaagtgatcaggaactcattaaatttcgacgacaa
caacaacaaatgtaccaaagggtgaacgacaattttagtgaaatagtgccagtaactcga
ccaaaaggtcgtagacgtgatggatattctagtgaccttgaaggatattctcaaaggtca
atgggtgtagctcatcatgaaacaagtgctatagacaataggaatttcccaaatcgtaat
aattctttgactcgtagttttacatatgacgggaaccagcaacagtcaccaaacaaatcc
caatcacaatactcacaaagtgaaacagtcggaaatgatgaactgtatgaacaaaacatg
gttgacccaaatttgaatcattacccatcatcctctcctagtccgttgcaaagaagaaac
ataattgaccaatccacacctttatcaccaaattctgcgaggagcaattataataagaaa
gattctgagtttgaactgaagaaggatttatttaatgctcaggatcagcatagagcagat
ggtataattgatccagaaaacagatatatgccaaacacctcagcacaatctcagggaccc
agcagggaagataataggccagttcctccgtacaaacctgccccgccttatccctcgtct
ccaggacaacgacagcttcctcaaacacctaacagaacttcaccttatggtgtttcattg
tatgataaacagattagaaattctcccatgaaagactttcatcaacgaatgccagatatt
caggagtctagggacagcaacacttcgctaaataggtcaaggtcacagttaaataatgga
aatagtgaccttgaccctcaggattatagaactagtgaaagttacagtcggaataattat
atggatatgcaaaatgtgcacagtgattctccacggacatcaacgtctgacagtgctaat
gtgtctagaacgtttataggtgctcatcaaggtgatgtaacatcagcgtcgtctaaagat
tctggtaactatagttaccatgatagaacattaggtgaatcacctgtaaatttaagaaac
tcacctttatcagggttacaggaaagacgtggttcacggaattctccgttagattatgtt
tatgatccaaggagaaattttgatagatacgataactctttccgtgaaccagcaacagtg
catatacctaccagatatgatgatatagccatgtataaaagtgatgaacctccctctcaa
gtttctagttcaacagatagtggatatggacataatctgattgagaaaatgctcgagtca
caaagattctcaggtaattcaaagggatctccctccccagatcactttaattctgactca
aacacttcgtcctcacatcaagaaggtattggccagtattcaaggggggcaactccaatc
aacaatccagacatgccatccagagatggatccaatcagggacagagatttgacaggttt
cgtgtgactataacaaagaatccagggttaggtttcagcattgcaggagggaaagggacc
tacgggaacccttttaggcccactgatttgggtatatttgtgacaaaaatacagcaggga
ggacctgcagcctctacactgagacgtggagacaaattgctcgaggtaaatggcaaagat
ttcactggaatagagcacacacaggctgtgaatgtgttaaaaacaactggtagtacagta
caactttgtgttgaaagggagataacaagttga
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