Mercenaria mercenaria (northern quahog): 123523950
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Entry
123523950 CDS
T07835
Name
(RefSeq) nuclear pore complex protein Nup155-like isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123523950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123523950
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123523950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
PCL_mid
Motif
Other DBs
NCBI-GeneID:
123523950
NCBI-ProteinID:
XP_045157681
LinkDB
All DBs
Position
3:complement(96881979..96917014)
Genome browser
AA seq
1376 aa
AA seq
DB search
MSMLGGMTSFVEATSHKDMLMLAGRLVDKHLQEDRNSLDLSELLRVPLHSQPSVSGLHDF
DYPSLLETGIGLDALSEISNLKRVPLPPELVEQFGRMQCNCMMGLFPEIERAWLSIDSDI
FVWKYEDGGDLAYFDGINETILSAALVKPKRGIFQPHIQYLLVLATPVDIVLLGASFTHT
NAEYDEMHLLPEPLFSIPTDNTYIMNIVGTDTGRIFMAGKDGCLYELAYQADDGWFSRKC
RKINHSTSTLSFLVPSFLNFSFSEEDPLVQIRVDNSRNILYCRTEKGCLQVYDLGQDGRS
LSKTAAIPLQNIVHNSSHVARTIDRSNFKPIVHISPIEKSESSNIHLVALTQTGVRLYFT
TNPFGTQKGRPSMLTLVHVRLPPGFLTSAAPQRPNNIHMAYYKQGCMILLSSQGENRDLM
WTIGSDSFPFQNQLMESHTTIGVEGRTWSISEVEYVKPQSEQEANGRDPPVVVTQHAKPP
RKFVILSAQGSHIMSKLRPVDQLRQLLIDCQGPDAEEVKAFFRLHKIEQACATCLILACT
RLATDQQVADWAKMAFFLYGGEAQYTYGGGGLSGDRPLMPSNIGPSGGGFGLSTSMYSPG
PTQQQQQQQNISTFPTPMQGMHPTQASTPMPYGNQPMYHQQPGGLPGFMQDINFSGKHNG
ICLYLARILRPIWDMMVTKEFPCQTPEGTVNYLTCNFPSEDLGFVLENVRELSDFVDFNS
KFDMGPADSGGMGGVPFTPHIMGHMDEQTRRKMQAEAQRMEKVSLQQVQELIHRVEEVLG
LLKVLVDHQFHTLAVTLTNDEQNQLKSLTFKEFVITGKELCGTLIQCLINRYLDDNATTD
AISSRLREICPSLYSTDDATCSKANEMLQAAKISQSPAERRQHLLEALRLYKSVSQPLQL
AEVCNQFSSVHFYEGIVDLCLTMANKRDPQKLALHFYNNDEPPEDMQGVQELMARKECYK
CITETLGYLMTASVPQGASVIPKSPGPPPAVDSSRMSIEDAEQYKAEVFRLALRSDDELF
HVSLYDWLFSMNMTDKLLEIQSPFLEQYLKRRASYQSGDVAALDLLWKYYEKIENYPAAA
RILSRLAERHGTDLDLQKRIVLLSRAIMCAKSSTSRSSSAVEGEFLHELEEKMEVARLQM
NVLRALTQETVGGPDVQEAMSRLESDLLDITMLYEEFADRFDLSECKLSIVHCAGLYDNA
LVENLWQNIIDKEFENTRSSAATVRVRNISNKLCAVGKTYIKAERYFPFAFIVKYLEQRS
CELQFDVGWVYQLMLDIGVPALRLLELYDRMFKSRDPFWSSINRPLHLLYVIHSFLNKLV
DNTSLIPVYERRQFGTMGLDYVACYLVELQSISSVDVNVRTLVANYKGLQAKMERL
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgcttggaggcatgacctcatttgtggaggccacgtcacataaagacatgttg
atgctagctggacgactggttgacaaacacttacaggaagatcgcaacagccttgacctg
tcggaacttcttcgtgttcccttgcattctcagcccagtgtaagcggtctccatgacttt
gactatcccagcttgctggagactggtatagggcttgatgctctctcagagatttcaaac
ttaaaaagagttcctttacctccagaacttgtcgaacagtttggacgaatgcagtgtaac
tgcatgatgggactgtttccagaaatagaaagagcctggttatctattgacagtgatata
tttgtctggaaatatgaagatggaggggatcttgcatattttgatggcatcaatgaaact
atattatcagcagctcttgtaaaaccaaaacgagggatatttcagcctcacatacagtat
ttacttgtacttgcaactccagttgatatagttctacttggtgcaagcttcacacataca
aatgcagagtatgacgagatgcatttattgccggagccgttgttctctatacccacagac
aatacttacatcatgaacattgttggtactgatactggtagaatatttatggcaggaaaa
gatggatgcctgtacgagctagcataccaggcagatgatggatggttcagcagaaaatgt
cggaaaatcaaccactctaccagtaccctgtcttttctggttccctcatttctcaatttt
tcattcagtgaagaagatccattagttcagataagagttgacaattccaggaatatattg
tactgtcggacagagaaaggctgtctacaagtgtatgatctcggtcaggatggcagaagt
ctgagcaaaactgctgcaataccattacaaaatattgtacataattcttcgcatgtagct
agaacaatagaccggtcaaacttcaaacctattgtacatatttcaccaattgaaaagtca
gaatccagcaacatacatctagtcgcacttacacaaacaggagtaagactgtatttcaca
acaaacccatttggtactcagaaaggtagacctagtatgctgactttggttcatgtacga
ctcccgcctgggttcctcacatcagctgctcctcaacgaccaaacaacatacacatggca
tattataaacaaggatgtatgatattgttatcatcacaaggggagaacagagatctcatg
tggactataggtagtgactcattcccattccagaatcaactcatggagtcacatacaacc
ataggtgtagaaggtaggacctggtccatcagtgaggtagagtatgtcaaacctcaatct
gaacaggaggcaaatggcagggacccaccagttgttgttactcaacatgctaaaccacca
agaaagtttgttatacttagtgcgcagggaagtcacattatgagtaaattacgtccggtg
gatcagcttcgacagttactgatagattgtcagggaccagatgctgaagaggtcaaagct
ttcttcagattacacaagattgaacaggcctgtgctacttgtctgatacttgcctgtact
cgactggctacagaccaacaggttgcagactgggcaaagatggctttcttcctgtatggg
ggcgaggcacagtacacatatggaggtggaggtctgtcaggggatcgacctctaatgcct
agtaacattggtccttctggtggaggatttggtttgagcacatctatgtacagtcctggt
ccaacacagcaacaacaacaacaacagaacatttctaccttccctacacctatgcaaggt
atgcatccaacccaggcatcaacccctatgccctatggtaatcagcctatgtaccatcag
cagccagggggtctgccagggtttatgcaggatatcaacttctcaggcaaacataacgga
atctgcttatatctcgctaggattctcagacctatatgggatatgatggtaacgaaagaa
tttccatgtcaaacaccagaaggaactgttaactatttgacatgtaatttccccagtgag
gatctcggctttgtgttggaaaatgtacgggaattatcggactttgtggattttaattcc
aaatttgatatgggacctgcagattctggaggaatgggtggggtaccatttacacctcat
ataatgggccacatggatgaacagactagaaggaaaatgcaagcggaagctcagagaatg
gagaaggtgtcactacagcaggtacaggagttgatacaccgggtagaggaggtgctagga
ctgcttaaagtactcgtagatcaccagttccatacactagctgtaactttaacaaatgat
gaacagaatcaacttaaatcactgacttttaaggaatttgtcatcactggtaaagaacta
tgtggcacactgatacagtgtttgataaaccgttaccttgacgacaatgcaacaacagat
gctattagcagccgattgagggaaatctgtccgtctttgtacagtactgatgatgctaca
tgttcaaaggctaatgaaatgcttcaggcagctaagatcagtcagagtcctgcagaaaga
cgacaacatcttctggaagcactaaggctatataagagtgtatcacagcctcttcagcta
gcagaggtatgtaaccagttttccagcgtacatttctacgagggtatagtagatctctgt
ctgaccatggccaacaaacgggatccccagaaacttgccctacatttctacaacaatgat
gaaccacctgaagatatgcagggggtacaagaacttatggcaaggaaggaatgctataag
tgtatcacagaaactctaggttacctgatgactgccagtgtaccacaaggggccagcgtg
atacccaagtccccagggccacctcctgctgtagacagcagtagaatgtctatagaagat
gctgaacaatataaagcagaggtattccgtctagcattaagatctgatgatgaattattt
catgtgtcactgtatgactggctgttcagtatgaatatgacagataaattattagagatc
cagtcaccatttttggaacaatacctgaagcgaagagccagctaccagtctggagatgtg
gctgcgcttgatttattatggaaatactatgagaaaatagagaattatcctgcagcagct
agaatattgtcacggctagcagagagacatggtactgatctagacctacagaagcgtatt
gtgttgctgtctcgtgcaatcatgtgtgcgaaaagttccacatcaaggtcaagctcagcg
gtagaaggagaatttttacatgaattggaggaaaaaatggaggttgctaggttacagatg
aatgtccttcgagccctcacacaggaaactgttggtggtccagatgttcaggaagccatg
tccaggttggagtctgatcttctagatattacaatgctgtatgaagagtttgcagatagg
tttgacctgtcagagtgtaaattgtccattgttcactgtgctgggctgtatgataatgct
cttgtggaaaatctttggcagaacataatagataaagaatttgaaaacactcgatcgagt
gcagctacagtgagggtaagaaacatcagtaacaagttgtgtgctgttggcaaaacatat
atcaaagctgagagatattttccctttgcttttattgtgaagtacctagaacaaagaagc
tgtgaactgcaatttgatgttggctgggtttatcagcttatgttagatattggtgtgcca
gctttaagattgcttgagttgtatgacagaatgtttaaatccagggatccattctggtct
tccatcaacagacctctgcatctcctctacgttatacacagtttcctaaacaagttagtg
gataacacttcactgatacctgtctatgaaaggaggcagtttggaactatgggtctcgat
tatgttgcgtgttatctggtggaattacagtctataagtagtgtggatgttaatgtacgg
acattggttgccaactacaaaggattgcaagctaaaatggagaggttgtga
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