KEGG   Mercenaria mercenaria (northern quahog): 123523982
Entry
123523982         CDS       T07835                                 
Name
(RefSeq) TATA-box-binding protein-like
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
mmer  Mercenaria mercenaria (northern quahog)
Pathway
mmer03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    123523982
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmer03000]
    123523982
   03021 Transcription machinery [BR:mmer03021]
    123523982
Transcription factors [BR:mmer03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    123523982
Transcription machinery [BR:mmer03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     123523982
  RNA polymerase III system
    TFIIIB
     123523982
  RNA polymerase I system
    SL1/TIF-1B
     123523982
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 123523982
NCBI-ProteinID: XP_053398478
LinkDB
Position
1:25066200..25084981
AA seq 198 aa
MDGQNFPYSSGMTPQQSPMVSPGTLQSFGLGPTPTPVMPPSNASLYPPATPGGPMTPISP
APASEGSGIIPTLQNIVCTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTAL
IFSSGKMVCTGAKSEDQAKLAARKYARIVQKLGFTAKFKDFKIQNMVGSCDVKFPIRLEG
LVLTHGKFSRFCTAFLCV
NT seq 597 nt   +upstreamnt  +downstreamnt
atggatggacaaaattttccatacagcagcggaatgacaccccaacagagtccaatggtg
tcacctggcacactacagtcatttggtttaggaccaacaccgactcctgtgatgccgcct
tccaatgccagtttatacccacctgcaacacctggaggacctatgacaccaatatcccca
gcgcctgcatcagagggatcaggaatcattcctactttacagaatattgtttgtacagtg
aatcttggttgtaagttagatctgaagaagatagctcttcatgcaaggaatgccgagtac
aatcctaaacgttttgctgctgtgatcatgagaatccgagaaccaagaacaacagcactg
atcttcagttccggcaagatggtgtgtacaggtgctaaaagtgaagaccaagccaaactt
gctgcaagaaaatatgcaagaattgtacagaaacttggatttacggccaagttcaaagat
ttcaagatacagaatatggttggaagctgtgatgtgaagtttcctatccgattagaaggt
cttgtccttacacacggcaaattctcaaggttctgtactgctttcctatgtgtttag

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