Mercenaria mercenaria (northern quahog): 123523982
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Entry
123523982 CDS
T07835
Name
(RefSeq) TATA-box-binding protein-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123523982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123523982
03021 Transcription machinery [BR:
mmer03021
]
123523982
Transcription factors [BR:
mmer03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
123523982
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123523982
RNA polymerase III system
TFIIIB
123523982
RNA polymerase I system
SL1/TIF-1B
123523982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
123523982
NCBI-ProteinID:
XP_053398478
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All DBs
Position
1:25066200..25084981
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AA seq
198 aa
AA seq
DB search
MDGQNFPYSSGMTPQQSPMVSPGTLQSFGLGPTPTPVMPPSNASLYPPATPGGPMTPISP
APASEGSGIIPTLQNIVCTVNLGCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTAL
IFSSGKMVCTGAKSEDQAKLAARKYARIVQKLGFTAKFKDFKIQNMVGSCDVKFPIRLEG
LVLTHGKFSRFCTAFLCV
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggatggacaaaattttccatacagcagcggaatgacaccccaacagagtccaatggtg
tcacctggcacactacagtcatttggtttaggaccaacaccgactcctgtgatgccgcct
tccaatgccagtttatacccacctgcaacacctggaggacctatgacaccaatatcccca
gcgcctgcatcagagggatcaggaatcattcctactttacagaatattgtttgtacagtg
aatcttggttgtaagttagatctgaagaagatagctcttcatgcaaggaatgccgagtac
aatcctaaacgttttgctgctgtgatcatgagaatccgagaaccaagaacaacagcactg
atcttcagttccggcaagatggtgtgtacaggtgctaaaagtgaagaccaagccaaactt
gctgcaagaaaatatgcaagaattgtacagaaacttggatttacggccaagttcaaagat
ttcaagatacagaatatggttggaagctgtgatgtgaagtttcctatccgattagaaggt
cttgtccttacacacggcaaattctcaaggttctgtactgctttcctatgtgtttag
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