Mercenaria mercenaria (northern quahog): 123524209
Help
Entry
123524209 CDS
T07835
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer02010
ABC transporters
mmer04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123524209
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123524209
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmer02000
]
123524209
Transporters [BR:
mmer02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
123524209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_15
AAA_23
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
123524209
NCBI-ProteinID:
XP_045158185
LinkDB
All DBs
Position
3:complement(84541126..84635311)
Genome browser
AA seq
2476 aa
AA seq
DB search
MGFFNQLLLLLWKNFTLRKRQKLRLVAEVVFPLALFLILLIVRITKPDLKVKHGECHFDG
KAMPSAGVLPFLQSFMCTFNNTCHKTENADEMPGVAGTFTQTGLAEAVTALEEILNNNVD
SEIIADSLTDLNILADLYQKIVDGTAVGNFTLGNSVIDPAKIRQQIIDQNLNLTSDVVDW
LLNATLNRQLFVNGLNETSLINIVASLVPPTFVSENDTISYIRQEVCNETRLKEIFYFPN
QTMSDRVHDELCGLSPDQFYTLVDDFVQDFDPVAFEQEIQQFVMQNTDGQQLALTLLEQW
ELLQTLQSNTSWQKPFRDLMNAVQSFQSEGNLPTDVSTASFSRIAGQFICGRSGALLSID
EDQAESLTEADREPVNSDLPSQHSPTPAPFSGDSANQTGQQDQATKDPVFDRLKDRSCVR
ETTPQCQALFKSLSNSGSETRFLWRQLKPFVRGCVLYYPQNPVTDEIINNTQQFFRDLEN
IGNLADAWADYSPQLFDYLNNSRTINALRLVVDSSLCSLGSTYAESQLSPNSTFNTSAVC
SFLKQYLSNGPNTTQYDWRDSLRYTDQLFSYIGEYIKCFNFDKFVGYTNRQQMMDDGIAM
IENDLFWAAVEFTGMDTSTSKMPTNIEYKIRMDVDKVDSTKRIRDRYPRPGPRRSPWPDL
KYFLYGFVYIQDMLEHAVIRVQTGESNIPVGIVTQQFPYPCWLQDKFIYAISRMLPLFMI
LAWILTTAMLCKSIVYEKDRRLKEVMKIMGLGNGVHWMAWFINAFIMMFATILILVIVLK
AGKVLEHSDPSAVLFFMTIFAIVTIIKCFLISVFFSRPNMAACCAGFIYFLGYLPYMLML
QFDEVLTRRTKMAVGLSSNVAFGYGCNFIALWEEQAIGLQWSNIGISPINDDDFNMLHSI
AMMIIDAVIYALFTWYIEAVFPGQYGIPKPFYFPFTKSYWCGSGGQLDGNDLRSTSMELN
GQGTEKMEAEPKNKRVGVAIRNLKKKYSSSNRLAVDGLSLNFYEDQITSFLGHNGAGKTT
TMSILTGLFPPTAGTAFIHGKDIRTEMDHIRHSLGTCPQHNVLFDWLTVEEHLWFYARLK
GSPAKEVKAEMEQMIKDVGLPHKRNEHSSNLSGGMKRKLSVAIAFVGNSKTVILDEPTAG
VDPYARRAIWQLLLKLKKGRTIILSTHHMDEADVLGDRIAIISQGRLCCIGSSLFLKNHY
GNGYYLTLVRGDTDLDEEAILKEQLMMNSNRPLSAGSVRTVTSVLPSITNEIEDEGYADG
KSDSSDPPTPPNDDTTYPGFSVKKVTSFIKKYVPEACLVEDNMTELCYQMPTEAAHRGDF
ERLFQQLEFSHSELGVSSFGISDTSLEEVFLKVAEENTVEVEEELKRNKLDEMADGGRIP
RGVSRLSFKRKKKLSLLGRRSANRVDSKTDLMAEEDTVLKRLLAGDSVISGPVSDYGENG
FSHNLHEKVTGWRLTMRQFIAIFFKRFHHVRRSKKGFLTEIVLPVIFILLAMTFSLIAPP
FSEEPPLELHPWHYEPVRGDSHLHMFYSNDAYNNPVSEKMEDIIQTKPGVGNRCVNKHSI
AGHPCEPVGQQIFPQQAPWNQTRNCDCSTGWQVCPDNAAGPTPPKVLLPTTDYLYNMTGR
QISDYLIKTQKEFAKRRYGGLSFGERDYAAFTANISQVQDYLERILKAANNGTTVSLGDR
EFWYDLTEVLPSLAVKDVAKVWFNNRGWAASVSYINVMNNLILRSNLPSGTNPADYSIVA
INHPMEMTKEQLNDEALYSSFKDVVIAICVIFAMSFIPASFTMYLIEERTSNSKHLQFVS
GVNPIIYWVSNFCWDMINYLIPTVLCIFIFLAFNTKAYVSATNAPCLVALLCLYGWAMIP
LMYPFSRVFSVPSTALVSLKSVNIFLGTVSTLATFIIEFLEEDDEGLKDINNILKQVFLL
LPQYCLGRGLFDMAKNQLFADVYARFGENMLPSPFEWKIVGRNLFSMFMLGILFFIINLL
IEYKFFIRSRVLKPSKETVDDEDDDVARERKRVISGNAKDDVLRLEELSKVYSSRGQRGR
LTAVDRLCVGVPKGQCFGLLGVNGAGKTTTFKMLTGDERLSRGNAYVNNYSILNEMVQVR
QNIGYCPQFDALDPLLTGVEHLRFYARLRGIPESDVREVADWAIRRLGLLPHANKISTNY
SGGNKRKLSTAISLIGNPSVIFLDEPTTGMDPGARRFLWDCINNIVKDGRSVILTSHSME
ECEALCGRLAIMVNGRFRCLGSIQHLKNRFGDGYTVIIRVSGEEPEMDPVMDFFNSEFPK
SVLKEKHHNMLQYQLGSDIQLSVLFGQIEAVRDKLNIEDYSVSQTTLDQVFINFAKLQSD
LADDEIDEMPEDLGLIGTARTLPSEAEGQSLAGSTAGLIRNEYRHSNHSYRPPGAGDDES
LHLTNIREPFQSRPIRSQDHSQNAPIISLPYQVKGQESSKDYDSQSEVSVASLQRRGRPI
TRFDDDPSNTIPNPEV
NT seq
7431 nt
NT seq
+upstream
nt +downstream
nt
atggggttctttaaccaattgttacttttactgtggaagaatttcacattacggaaaaga
caaaagctccgtcttgtcgcagaagttgtatttccactggcattgtttcttatattactg
atagtgaggatcacaaagccagacctcaaagttaaacatggggagtgtcattttgatggg
aaggccatgccatccgcaggagttctgccttttcttcaatctttcatgtgtacgttcaac
aacacttgtcacaaaacagaaaatgcagatgagatgcccggtgtggccggaacatttaca
caaacagggttagcagaagctgtgacagccctagaagagatactaaacaacaatgttgat
tctgagattatagcagattctcttacagatctaaatatactggcagatctctatcagaaa
atagtagatggtacagcagtaggaaatttcactcttggcaactctgtgattgatcctgca
aaaattcgacagcagattatagaccagaacttgaacctgacctctgatgttgtggattgg
cttttaaatgctactctcaatagacagctgtttgtcaatggactaaatgaaacatcgttg
atcaacatcgtagcctctttagtgccaccaacatttgtatcggagaatgataccatatct
tacatacgacaagaagtgtgcaatgagacaagactgaaggagattttctattttcccaac
cagaccatgtctgatagagtccacgatgaactgtgtggcctgtctccagaccagttttat
acgctagttgatgactttgttcaggattttgacccagttgcttttgaacaagagatccaa
caatttgttatgcagaatacagatggacagcagctggcacttacattgctcgaacaatgg
gaactattgcagacattacagagcaacacttcttggcagaaaccgttccgtgacttgatg
aatgccgtacagagctttcagtcggaaggaaatctaccaactgatgtatcaacagcatct
ttctcccgcattgctggtcagtttatttgtggacgatctggtgccttgctttccattgat
gaggaccaggcagagagtctgacagaggcagaccgggaaccagttaactcagatttaccg
tcccaacactcgccaactccagcgccgtttagtggagactctgccaatcagactggccaa
caagaccaggcaaccaaagacccagtgtttgatcgtctcaaagacaggtcatgtgttagg
gaaacaacaccacaatgtcaggctctgttcaagtcattatcaaatagtggttcagagaca
aggtttctatggcgacagctgaaaccatttgtcagaggttgtgtattgtattacccgcag
aatcccgtcacagatgagatcataaacaatactcagcagtttttccgagatcttgagaac
ataggaaacctggctgatgcttgggccgattattccccgcagttatttgactacctaaat
aacagccgtaccatcaatgctctcaggctggttgtggacagcagtctttgctccttgggt
tcaacttatgccgaatctcagctcagtccaaatagtacattcaatacatcggcggtatgc
tccttccttaaacaatatcttagcaacggacccaacaccacacaatatgactggagagat
tctttgagatataccgaccagctgttcagctacattggagaatacattaagtgtttcaac
tttgacaagtttgtcggctatacaaacagacagcagatgatggatgacggaatcgcgatg
atagagaacgatttattttgggcagcagtcgaatttacagggatggacacgtcaacgtca
aaaatgccgacaaatattgaatacaaaattcgaatggacgttgataaggttgacagtact
aaaaggattagagacaggtatcctcgaccgggtcccagaagaagcccgtggccagacttg
aaatatttcctgtacggttttgtgtatatacaagatatgctagaacatgcagtgatacgt
gtacaaacaggggaaagtaatatcccagtaggaatagttacccagcagttcccatatcct
tgctggctgcaagataaatttatatatgccatatcaagaatgttgccattatttatgatt
ctggcgtggattttaacgacggccatgttgtgtaagagtatcgtttatgagaaggataga
cggctgaaagaggtgatgaagataatggggctcggcaatggcgtgcactggatggcgtgg
tttataaacgcctttataatgatgtttgcgacaattctcatacttgtcatagtcctcaag
gctggaaaagtgttggaacattctgatccctcggctgtgttattcttcatgacaatattt
gcgatcgtcacgatcatcaaatgcttcctcatcagtgtgtttttctcgcgcccaaatatg
gccgcctgctgcgctggatttatatattttctgggttatctaccttacatgttaatgctg
cagtttgatgaggtcctcaccagaagaactaagatggctgtgggtctatcatcaaatgta
gcttttggctatggttgtaacttcatagccctatgggaggagcaggctataggtctacag
tggagtaatataggcatcagtcctatcaatgatgatgatttcaacatgttgcattctatc
gccatgatgataattgatgcagtcatctatgccctgttcacatggtacatagaagcagtt
ttcccagggcagtatggtattccaaaaccgttctatttcccatttaccaagtcatactgg
tgtggcagtggtggtcagttagatgggaacgatctaagatcaaccagtatggaactaaat
gggcaaggcacagaaaaaatggaggctgaacccaagaataaaagagtcggcgtggcaata
cggaatctgaagaagaaatactcgtctagtaatcgcttggcagttgatggtctcagttta
aacttttatgaggatcagattacgtctttccttggacataatggtgcaggaaaaactaca
accatgtcaattttgactggtctgtttccaccgacagcgggtacagcatttatacacggc
aaagatatacgaacagagatggatcatattagacatagcctgggcacttgtccgcaacat
aacgtactcttcgactggttgacagtagaagagcacctgtggttctacgctcggttgaag
ggctctccagcaaaggaggtgaaagcagagatggagcagatgattaaagatgtaggactg
cctcataaacgaaacgaacattctagcaatctttctggtggaatgaagaggaaattgtct
gttgccatagcgtttgtcggaaactcaaagacagtgatcttagatgagccaacggctgga
gtggatccttatgccagaagagctatatggcaacttctgctgaagttgaagaaaggtcgt
actattattctgtcaactcaccacatggatgaagcagatgttctgggagaccgaatcgca
atcatctctcagggtcgtctctgctgtattggctcaagtctgtttttaaagaatcactat
ggcaatggttactatctgacgttggtacgtggcgatacggacttagatgaggaagccata
ttgaaggaacagttgatgatgaacagcaatagaccattgtctgccggcagtgtcaggact
gttacaagtgtccttccgagcattaccaatgaaattgaggatgagggatatgccgatgga
aagtcagacagcagcgatccacccaccccacctaacgatgataccacatatccaggcttc
tcagtgaagaaagtgacatcattcatcaagaagtatgtaccagaagcttgtctagtggag
gacaacatgacagaattgtgttaccagatgcccacagaagccgcacacaggggtgacttc
gaacgtcttttccaacaactagagttttctcactcagagcttggtgtctccagttttgga
atctcagatacaagtttggaagaggttttcctgaaagttgctgaagaaaacactgtagaa
gttgaagaagaactgaagagaaataagcttgatgaaatggctgatggtggtagaattccc
cgcggtgtgtcaagactgagttttaaacgtaagaagaagttgtcactgttgggcagacgt
tccgcaaacagagttgatagcaaaacagaccttatggctgaagaagatacagtgctgaag
cgtttattagcaggagattctgtgatttctggcccagtcagtgactatggagagaatgga
tttagccacaacctgcatgagaaggtcacgggttggagactcaccatgcgccagtttatc
gctatatttttcaagcggttccatcatgtcagaagaagcaagaaaggatttctgactgag
attgtgttacctgttatatttatcctgcttgcgatgactttctccctgatagcaccccca
ttttctgaggagcccccattggagctacacccctggcattatgaaccagtgagaggagac
tctcatctccacatgttctatagtaatgatgcctataacaaccctgtttctgagaagatg
gaagatattatacagaccaaacctggtgtaggaaacagatgtgtcaataaacattctatt
gcgggtcatccatgtgaaccagtaggtcagcagattttcccgcagcaagcaccttggaac
cagaccagaaactgtgactgtagtaccggttggcaggtgtgtccggataatgctgccgga
ccgactcctccgaaggtgcttctcccaacaacagactacctatataatatgacaggaagg
caaatcagtgactatctgataaaaacacagaaagagtttgcaaagagaaggtatggtggt
ctttcgtttggagagagagactatgccgcctttactgccaatatttcacaggtccaggat
tatctggagagaatattgaaggctgcaaacaatggtactacagtgtcactaggggaccga
gaattctggtatgacctgacagaagttcttccatctctggcagtgaaagacgtagcaaag
gtctggttcaacaatcggggctgggctgcatctgtctcatacatcaacgtaatgaacaac
ttgatactgagaagtaatctaccctcgggaacaaaccccgctgactacagtatagtagca
ataaaccatcccatggagatgacaaaagaacagcttaatgatgaagccttgtacagcagt
tttaaggatgtggtaattgctatctgtgtgatatttgcaatgtcgttcatcccggctagt
tttaccatgtacctgattgaagaacggacctccaactctaaacatctacagtttgtcagc
ggagttaaccccattatctactgggtgtcaaatttctgctgggatatgataaattacctg
ataccaacagtgctgtgtatatttatatttctggcattcaacacaaaggcctatgtatct
gcaacaaatgccccctgtctagttgccttactctgcttatatggttgggcgatgattccc
ctgatgtaccccttctctcgagtgtttagtgtacccagtacagccctcgtttccctcaaa
tctgtgaacatattcctaggaacagtgtccacactggcaaccttcattatagaattccta
gaggaagatgatgagggcttgaaagacatcaacaatattttgaagcaagtgttcctgctg
ttaccgcaatactgtctgggacgagggctgtttgatatggccaagaaccagctgtttgct
gatgtttacgcaaggtttggggaaaacatgctgccaagcccgtttgagtggaagattgtt
ggtcgtaacttgttcagcatgttcatgcttggaatcctgttctttatcattaatcttttg
atagagtacaagttcttcatcagatctagggtattgaagccatcgaaggagactgtagat
gatgaggatgatgatgtagctagagagaggaagcgggtcatttctggtaatgctaaagat
gatgttctcagattggaagaattatcaaaggtgtacagttcacgagggcagcggggtcga
ctcactgctgtggacaggctgtgtgtaggagttcccaaggggcagtgttttggtttacta
ggagttaatggtgcaggcaaaacaacaacatttaagatgttaacaggggatgagagattg
tcaagaggaaatgcctatgtgaataactacagcatactgaatgagatggtacaggttcga
cagaacatcggttattgcccacagtttgatgcccttgatcctctgctaacaggagtagaa
catctgaggttctatgccagactgagaggtatcccagaatcagatgtgagagaggttgct
gactgggctataagaagacttggacttctgcctcatgcaaacaaaatctccacaaactat
tctggtggcaacaagaggaagctatccactgccatatcacttataggaaatccttctgtc
attttcttggatgaaccaacaactggtatggaccctggggccaggaggtttctgtgggat
tgtatcaacaacattgtcaaggatgggagatctgttatattaacttctcacagtatggaa
gagtgtgaggcattatgtggtcgcctggctataatggtaaatggtagatttagatgtctg
ggcagtatacagcatcttaaaaacagatttggtgatggatatacggtgattattcgtgta
tcaggcgaggaaccagaaatggatcctgtcatggatttcttcaactcggaatttccaaag
tctgtgttgaaagagaaacaccataacatgttgcagtaccagcttgggtcagacattcag
ctgtccgtacttttcggccagatcgaggctgtgagagacaaactgaatatagaagattat
tctgtgtcacagacaactttggaccaggtgtttatcaactttgccaagctgcagtctgat
ttagcggatgatgagattgatgaaatgccagaagatcttggcttgatcggtacagcaaga
actttaccaagtgaagcagagggacagagtttggcaggaagcactgcagggcttataaga
aatgaatatcgccatagcaaccacagttaccgtccccctggtgcaggtgatgatgagagc
ttacatctgaccaatattcgggaaccattccagtcccgaccaatcagatcacaggatcac
agtcaaaatgctccaattattagtttgccttaccaggttaaaggtcaagaaagtagcaag
gactacgactctcagagtgaagtttctgtagcatcattgcaaagacgaggtcgacctatc
accagatttgatgatgatccatcaaacacgattccaaatccagaagtttag
DBGET
integrated database retrieval system
