Mercenaria mercenaria (northern quahog): 123524228
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Entry
123524228 CDS
T07835
Name
(RefSeq) pumilio homolog 3-like
KO
K14844
pumilio homology domain family member 6
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123524228
03009 Ribosome biogenesis [BR:
mmer03009
]
123524228
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
123524228
Ribosome biogenesis [BR:
mmer03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
123524228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
PUF
CM1
DUF848
DUF2951
Motif
Other DBs
NCBI-GeneID:
123524228
NCBI-ProteinID:
XP_053395776
LinkDB
All DBs
Position
3:complement(83402696..83424546)
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AA seq
787 aa
AA seq
DB search
MMEVSKRHQRRSNYSHQTARGNPEGDSIVKKQRYKVGGPPGGDYDTNAEYGMSPVKRRKQ
HGYENYHSTNKKGHYGQSYLESEVSTLDISDTPESLSQISAIAPVSDISNIQPSFARSRH
GKMAADTTWENAVSHARGEPDGAERSFHKKKSKVSMKEQLETVPEEESVHSKGSSGGGSM
RQVEGSPGIQKPPPTTVERKKSVKGQLRKAASVLKKARSKSKLPENKVGVKRKLDATLAD
ETMTKKPDTKELSKKERKQVRKALKTNYDQIQRSKKIWEELRRFNVKKDRKLELCNELYD
MVKDRMKEFCFAHDTARVVQCLIQYGTPEHRERVFEELKDEIPIMAKSKYAKFLVKKMLM
YGTKHHRSAVYKSFHGHVRQLIRHKVAADVVEYAYNEYANAHQRLSMLEDFYGPSFCLFK
TPDIKCLGQIMLSQPDKREMILRNMREALLPLIDKNILVHSMVHKVFMEYFTYADGKMKA
EMIEALRESVIHMLHTRDGARVAMQCIWHGTAKDRKTIIKSFKGSVVKICQEEYGHLVML
SIFDCVDDTKIVKAVLLEEMMKSVNDVAENQYGRKVLLYLLSPRDSHHFCPDIVRVLQEG
DASLTSKKDKSVRYQELLAAISDQLLQYIVDNVSKLVVNNNMLVLIVAIITHAQGDPTAA
MDAVAGIAAEPFVVGNTEGGLHIVENPAGHMTLKWLIQNDKQRIKTGQKVLFSEVLLKKL
PEGALKSWAACNRGCFILVCLLDLEHPEITKTVVGQLMKGVRHSLKKMTFKGAQILAQKL
DDAKSSV
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggtttctaaaagacatcagagaagaagtaactacagccatcaaactgccagg
ggcaatccagagggtgatagtattgtcaagaaacaaaggtacaaggttggaggccctcca
gggggagattatgacaccaatgctgaatatggcatgtcacctgtcaagagaagaaaacaa
catgggtatgagaattatcactccacaaataagaaaggtcactatggccagagttacttg
gagtctgaagtttccacacttgacatctcagacacgccagagtctctctcacagatcagt
gcaatagcaccggtatctgacatctcaaacattcaacctagttttgcaaggtcgaggcat
ggtaagatggcggcagacaccacctgggagaatgcagtgtcgcacgctagaggggaacca
gatggtgctgaaaggtcatttcataaaaagaaaagtaaagtctcgatgaaggagcagcta
gagactgttccagaagaagaatcagtacacagtaagggtagtagtggtggcggcagtatg
agacaggttgagggctcaccgggtatacagaaacctccacccacaaccgtggaaaggaag
aaatctgtcaagggccaattaagaaaagcagcatcagtgttgaagaaagcaaggtctaaa
tctaaacttccagaaaacaaagtgggtgtgaagagaaaacttgatgcaaccttagcagat
gaaacaatgacaaagaaacctgatacaaaggaactgagtaagaaggagaggaagcaagtc
aggaaggcattaaagacaaattatgaccagatacagaggtcaaagaaaatatgggaagag
cttaggaggtttaatgtaaagaaggatagaaaactggaactgtgcaatgaactctatgat
atggttaaagacagaatgaaggagttttgttttgcccatgatacagccagggttgtgcaa
tgtttaatacagtatggaactccagaacatagagaaagggtatttgaagaattaaaagat
gaaattccaataatggcaaagtcaaagtatgctaaattcttggtgaagaaaatgctgatg
tatggtacaaaacaccatcgaagtgctgtatacaaaagttttcatggtcacgttaggcag
ttgataagacataaagtggcagcagatgttgtagagtatgcttacaatgaatatgccaat
gctcatcagaggctcagtatgcttgaagatttctacggaccaagtttttgtcttttcaag
acccccgatattaaatgtttgggtcagataatgcttagtcagcctgacaagagagaaatg
attctgagaaatatgcgagaagctctgttacctcttatagataaaaatattctggttcat
tcaatggtacataaagtatttatggagtatttcacatacgcagatggcaaaatgaaagct
gagatgatagaagcattacgagaatctgtgattcatatgttacatacaagagatggtgca
agagtggccatgcagtgtatctggcatggaactgctaaggacaggaaaactataatcaag
agtttcaagggcagtgttgtaaagatctgtcaggaggagtatggacacctggtcatgttg
tctatatttgactgtgttgatgataccaagattgttaaagctgtacttttagaggaaatg
atgaaaagtgtaaatgatgtagctgagaaccagtatggcaggaaggtgttactgtatttg
ttgagtccacgagactcgcaccacttctgtccagatattgtacgagtactgcaggaaggt
gatgctagtcttacaagcaagaaggataagtcagtgcggtaccaagaactgcttgcagca
atctcggatcagttgttacagtatatagtagacaatgtatctaaacttgttgtgaacaat
aacatgctagtgttgattgtggccatcatcacacatgctcaaggagatccaacagcagct
atggatgctgttgcaggtatcgctgctgaaccattcgttgttggcaacacagagggaggg
ctacacatcgttgagaatccagctggtcacatgactctgaaatggctcatacagaatgat
aaacagagaattaaaactggacaaaaagtgttgttctctgaagtgttactgaagaaactt
ccagaaggtgcacttaagtcgtgggcagcttgtaataggggatgcttcatattagtttgt
ttgttggacctggaacacccagagattacgaagacagttgtaggtcagttgatgaaggga
gtgcgacattcgttgaagaaaatgacatttaaaggagctcaaatacttgcacagaaactg
gacgacgcaaaatcatctgtctag
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