Mercenaria mercenaria (northern quahog): 123524409
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Entry
123524409 CDS
T07835
Name
(RefSeq) E3 ubiquitin-protein ligase Rnf220-like isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123524409
Enzymes [BR:
mmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123524409
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123524409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-Nse
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
123524409
NCBI-ProteinID:
XP_045158523
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Position
3:complement(73197097..73230653)
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AA seq
579 aa
AA seq
DB search
MQNLHDLAMFRFNFWHKPFLSPPAAHQPFPPGMESTSFIPNPLGAPALMVLASTAENHEG
ARITGAPRFNSPENKESAPQFSSANYTMYRPGEHFPAPIYAPVHPFVRSATERSGVRLMH
PAGSSAFRPLTENPEQYHSAFSPAKRPKPEDLSTKNYTSNIETNENIGNNDFARDLSKED
RPSSLSSVNYDTNSETHSETGEGDRQTPDSEGRSLRKQRKKLILDGQTPHCPICGLTLRP
GETETHLQVELEKLDKLSARNVRKSRENTPQGRKTLPSPSGNRGKDSPGVGAASQARYEN
YLRIQNNRQARLGVRSRTRKKKLEETVCPVCNKKVSGTPEELNEHVELCLKKRDDELEPV
DVEADNEQYEEYTWAGQTRIRASSMLDGGYAGSGFQIASCSSQGQDEDCDLNVDDDDSEK
YGKPQYSEVDVIPCASDEPNEDREREALRGAFLSTADAPTILKSHSRLTNTDIEGAYNPE
DSVSSHIKCEPHDDKESVEVGGSAGQIITALRCRLKEKDEKQISPKCLICMEPYNKPVAS
TQCWHVHCEECWLRTMGAKKLCPQCNMITSPADLRRIYL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacttgcatgatttagctatgtttcgttttaatttctggcataaaccattcttg
tcacctcctgcagctcatcagccgtttccaccaggaatggaaagtacgtcgttcataccg
aacccgctgggtgcaccagctttgatggtactggcatcaacagctgaaaatcatgagggt
gcgcgaataactggggcacctaggtttaacagccctgaaaacaaggagtctgcaccacag
tttagttcggcaaattacacaatgtatcgcccaggggaacattttccagcaccaatttat
gcaccggttcacccatttgttcgatctgctacagaaaggtctggggttcgactcatgcac
cctgcagggagcagtgcttttaggccactgacagaaaatccagaacaataccactcggca
ttttctcctgctaagcgaccaaaaccagaagatttatcaaccaaaaattacacctcaaat
atagagacaaatgaaaacattggaaataatgactttgcaagagatctgtcaaaagaagac
cggccatctagtttaagttctgtcaattatgacacaaattctgagacgcattcagagaca
ggcgagggagatcgtcagacaccagattcagagggccgttcattaagaaagcaaaggaag
aaattgatactagatgggcagactccacattgtccgatatgtggactgacgttgcgtccg
ggggaaactgagacacatctgcaagtggagctagaaaagctggataaactctccgctaga
aatgtcagaaagtccagggaaaatacaccacaaggcagaaagacattaccatctccatct
ggaaatcgagggaaggattcacctggtgtaggggcagcttcacaagccagatacgagaat
tatttacggatccagaataacagacaggcaagacttggtgttagaagtcgaacacgcaag
aagaagttagaggaaactgtttgtcctgtgtgcaataagaaagtatctggaactccagag
gaattgaatgaacatgttgaactctgtctgaaaaagcgtgatgacgagctagagccggtt
gatgtggaagcagataatgaacaatacgaggaatacacatgggcaggacagactcgcata
cgagcttcatctatgttagatggcggctatgctggttcaggatttcagatagccagctgc
agcagccagggtcaggatgaggactgtgatctcaatgttgatgatgatgattcagaaaaa
tatggcaaacctcaatacagtgaagtggatgtgataccttgtgcttctgatgagccaaat
gaagacagggaaagagaggccctgagaggggcatttttaagtaccgctgatgctccgacc
attctaaagagtcacagtcgactaacaaatacagatatagaaggtgcttataatcccgag
gatagtgtatcatcacatataaagtgtgagcctcatgatgacaaggaatcagtagaagtt
ggtggttctgctggacaaatcatcacggcattgagatgtcgcctcaaggagaaagacgag
aaacagatctcgccaaaatgtctcatatgtatggagccgtataacaaaccagtggcatca
actcagtgttggcatgtacattgtgaagaatgctggcttagaacaatgggagctaaaaag
ttgtgtcctcagtgtaacatgataacatcaccagcagatctacgcagaatctatttatga
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