Mercenaria mercenaria (northern quahog): 123524438 Help Entry 123524438         CDS       T07835                                  Name (RefSeq) cysteine protease atg4da-like   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism mmer  Mercenaria mercenaria (northern quahog) Pathway mmer04136   Autophagy - other mmer04140   Autophagy - animal mmer04145   Phagocytosis Brite KEGG Orthology (KO) [BR:mmer00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     123524438    04140 Autophagy - animal     123524438    04136 Autophagy - other     123524438  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:mmer01002]     123524438   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:mmer04131]     123524438    03029 Mitochondrial biogenesis [BR:mmer03029]     123524438 Peptidases and inhibitors [BR:mmer01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    123524438 Membrane trafficking [BR:mmer04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     123524438 Mitochondrial biogenesis [BR:mmer03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     123524438 SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C54 Motif Other DBs NCBI-GeneID:  123524438 NCBI-ProteinID:  XP_045158579 LinkDB All DBs Position 3:71542280..71612506 Genome browser AA seq 658 aa AA seqDB search MADGSSKYNCLKKEFITNSKRLTSDVTFLDNMSEENTAHISSGEIESKRTQKCNELLLSP VMLCTAAEPPSETEITRIKLTKSVMPKILNSRYMQSSRFFRLHDDDPIENENSDLALGEC GHNIKCHNDEKRPHDLLKRSQNSNKYNEDYSLKAEPTSLNTDNYHSNICDCRNCLISSAG HKSLPILPTQDSLYGKSISNQTYLKKHKSIPYLQSALSKQTFDEVEIEQSEKVKNKLISV WNNVRYGWTLKTETKFGKDSPIFLLGRCYHKRPNDDDPEPGEVIHTPPSMELFKQDFQSR LWFTYRRDFQVLPQTKFTTDCGWGCMLRSSQMMLAQAFICHFLGRDWRVHNQTKEQETFY RQIIQWFGDSLSDQSPFSLHHLVELGKVFGKQPGEWYGPSSVAYIIRDAVIKASTSQPVL KDVCVYVAQDCTVYKQDIMEMCSTRPRNLTSSDDSDKQDNGCSSQISSSSSQNNRDWKRS VIIFIPVRLGGEEFNPIYSPCIKNLMAQESCLGIIGGKPKHSLYFIGWQEDKLIYLDPHF CQDYVDILKRDFKIESFHCFSPRKVSLSKMDPSATVGFYCRTKEDFDRFVEHAEEMVTPK KGSGLYPMFVFSEGKGSDMNIHDLSLSIEKSVRVRHVTVDQWGKTRSSTIDSEEFVVL NT seq 1977 nt NT seq  +upstreamnt  +downstreamnt atggcagatggaagttcaaaatacaattgtttaaagaaggaatttattacaaacagtaaa cgattgacaagtgatgtgacgtttttagacaatatgagcgaagaaaatacagctcacata agttcaggagaaattgaaagtaaaagaacacaaaaatgcaacgaacttctacttagtcct gtaatgctgtgtacagcggctgaaccaccgtcagaaacagagatcacaagaattaaacta acgaaatctgttatgccaaaaattcttaacagcaggtatatgcagtcatcaagatttttt agactacatgatgatgatccaatagaaaatgaaaacagtgatttagcattgggagaatgt ggtcataatatcaaatgtcacaatgatgagaaaagaccacatgatttgttgaaaagatct caaaactcaaacaaatacaatgaagattattctttgaaagcagaaccaacgtccttaaat acagacaattaccactccaatatatgtgactgcagaaactgtttaataagctcggctgga cacaaaagtttaccaatactgccaacacaagattcattatatggaaaatcaatatctaat caaacttatttgaagaagcataaaagcataccgtacctccagtcagcactttcaaaacag acctttgatgaagttgaaatagagcagagtgaaaaagttaagaataaacttatatcagtt tggaataatgttagatatggttggaccttgaaaactgaaacaaagtttggaaaagacagt ccaatatttctgcttggacgatgctatcataaaagaccaaatgatgatgacccagaacca ggggaagttatccatacaccaccaagcatggaattgttcaagcaagattttcagagtcgg ctctggtttacttatcgcagagattttcaagtattaccacaaacaaagtttacaacagac tgtggctggggatgcatgttgcgtagcagtcagatgatgttagctcaagcttttatttgc cattttctcggaagagactggagagtacataatcaaacgaaagagcaagaaacattttat cgtcaaatcattcaatggtttggtgattcattaagtgaccagtctccattttctttgcat catctggttgagttaggaaaggtctttggcaaacaaccaggagagtggtatggtccttct tctgttgcttacattatcagagatgcagttattaaagcatcaacatctcaaccagtgcta aaagatgtgtgtgtttatgttgctcaggactgtactgtgtataaacaagatattatggag atgtgttccacaagaccaagaaatttgacaagttcagatgacagtgataaacaagataat ggatgctctagtcagatcagtagctcaagttctcaaaataatcgagactggaaaagatct gtgattatttttataccagtacggcttggtggggaagaatttaatcctatctattcacca tgtataaaaaatctcatggctcaagaatcttgtctaggaatcattggtggaaagccaaag cattctttgtatttcattggatggcaagaagataaattgatatacctagatccgcatttt tgtcaagattatgttgacattttaaagagggactttaagattgagtcctttcactgcttc tctcctcgtaaagtatctctgagcaagatggatccaagtgcaactgtaggcttttattgc aggacaaaggaagactttgacagatttgtggaacatgcagaagagatggttacaccaaag aaaggcagtggtttgtatccaatgtttgtttttagtgaaggaaaagggagtgatatgaac atacatgacttaagtctcagtatagaaaaatcagtgagagttcgtcatgtcacagttgac cagtggggcaaaactagatcatcaacaattgactctgaagaatttgtagtgttatag

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