Mercenaria mercenaria (northern quahog): 123524441
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Entry
123524441 CDS
T07835
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23-like isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123524441
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
mmer04031
]
123524441
Enzymes [BR:
mmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123524441
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123524441
GTP-binding proteins [BR:
mmer04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
123524441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Ras
Roc
G-alpha
SRPRB
Gtr1_RagA
zf-B_box
zf-RING_UBOX
MMR_HSR1
ANCHR-like_BBOX
zf-RING_5
zf-RING_2
cobW
ATG16
Tht1
Motif
Other DBs
NCBI-GeneID:
123524441
NCBI-ProteinID:
XP_045158581
LinkDB
All DBs
Position
3:71297333..71496779
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AA seq
573 aa
AA seq
DB search
MSKSFVSCNSFKGSFAAQNTESTILECRVCDEVFQLQGDKVPRLLICGHTVCHYCLSRLT
VNDHVILCPFDRQPTDIGDSGIWGLKKNFALLELLERLQFSPQTTAPPSSFSQESIAKEK
EFDILCDENEAHTAVVYCITCETHLCMECSDTIHNTRTLIKHKRVPISEKPRENPKCIYH
PMHFVEFSCLEDECKTNPLMCYICKDYGRHVKHKHALLEVEAEQVRTFMLNAVQHVKSFG
EEVNDAIHRIGSTIQQLEGGYQHIQNPESTSVSQQQPGTIEEARIKIRNYFHTLRETLNR
QEITALTTVDTHIREKLCMLQQQQEDMAMLLSQISAVCHQCETTLKSDDTKVLLAKPEVG
VLLETVQKQQQQFSDLQEHITLDPQIPITFTKDNRVHIGPKIEMRVVILGLDGAGKTSLL
FKMKNNEFITTIPTIGFNVETVEYKNVKLTIWDVGGQHKIRPLWKHYYFNTQAVIFVIDS
HNNDRLIEAHSAFVKLVQEKELKDASLLIFANKQDLNPSVSIEELTEQFGLFKLCCNRSW
HIQACDANTGMGLQEGLEWLSRQIVAAGAPDLP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagtcttttgtatcttgtaacagttttaaaggatcgtttgctgcacaaaatact
gaaagtacaatacttgagtgtagagtttgtgacgaagtgttccaactccaaggagacaaa
gttccacgactgttgatttgtggacacactgtgtgccactactgcttgagtagactcaca
gtaaatgaccatgtcattctgtgtccttttgaccgtcagccaacagatataggagattct
ggtatatggggattaaagaagaattttgctctgctggagttgttggaaagattacagttc
agtcctcagaccacagctccaccttccagtttttcacaggaatccatagccaaggaaaaa
gagtttgatatactctgtgatgagaatgaggcacatacagctgttgtgtattgtatcacc
tgtgagacacatctttgcatggaatgctcagatactattcataatacaaggacattgatt
aagcataaaagggtgccaatatcggaaaaaccaagagaaaatccaaaatgtatttatcat
ccaatgcattttgtagagttttcctgtttagaagatgagtgtaaaacaaatccattaatg
tgttacatatgtaaggattatggaagacatgttaagcataagcatgctttattagaagta
gaggctgagcaggtccgtacatttatgctgaatgcagtgcaacatgtcaagtcatttggt
gaagaagtgaatgatgctatacatagaattggttcaacaatacaacagttggagggtggt
taccaacacatccaaaatccagagagtactagcgtctcacaacagcaacctggaacaata
gaagaggcaagaataaaaatacgaaactattttcatacactgcgtgagacattaaacaga
caagagattactgctctaactacagtagacactcacatccgagagaaattgtgcatgtta
cagcaacaacaggaagatatggccatgctgttgtcacagatatcagctgtttgtcatcag
tgtgaaaccactcttaagagtgatgatacaaaagtactactggcaaagcctgaagtgggt
gtacttctagagacagtacagaaacaacaacaacagttttctgatctacaggagcatatt
acgcttgatccccagatacccattacattcactaaggataatcgtgttcatattggacca
aagatagagatgcgagtggtgatattaggtctggatggtgctgggaaaactagtcttctt
ttcaaaatgaaaaataatgagtttattacaacaattcccacaatagggtttaatgttgaa
acagtggagtataaaaatgtgaagctgacgatatgggatgttggtggacaacacaagatt
agaccattgtggaagcactattattttaatacacaagcagtgatatttgtcatagacagc
cacaacaatgatagactgattgaggcccatagtgcttttgtcaaactggtgcaagagaag
gaattgaaagatgcctcactgctaatatttgcaaataaacaggacttgaatcccagtgta
tcaattgaggagttgacagaacagtttgggttgtttaaactgtgctgtaacagaagctgg
catatacaagcctgtgatgctaacactgggatgggtctacaggaaggcctcgaatggttg
tccagacaaattgttgctgctggtgcacctgatctgccatga
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