Mercenaria mercenaria (northern quahog): 123524461
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Entry
123524461 CDS
T07835
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
123524461
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
123524461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
123524461
NCBI-ProteinID:
XP_045158607
LinkDB
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Position
3:68930191..69229520
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AA seq
1366 aa
AA seq
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MTDIEDKISAQVASTVGEILRGEAIEEGFSGYIKHTPQSLQKKIEYNTDLLSTLWTNIPQ
DSHNIGLKVYANSYFNVKNVNRVDLLATLLETMAEKNVLQSKFICETLLDHEKMVYMNTK
PFIRAFQLIRKLVGGVDYKGCRDLLRMILHNHNIETQNANILPQVEAMISVVAYILDRNV
CLLPSYLAVNEITKMSPEVKNWPHWKMGRLLSEFVYSFRPVAQMVTISGRSHLLPVVGHS
VATNNVWRLNSKDLKFSLSGPLPYSREVQEPQSGLLRYVLEQPYSRDMVGSMLGLNKQVK
QRCEVLEEQLVNLVVSAMEHSENLDSSADPGLSHLLWQHLSSQLIYFVLFQFASFPHMVI
SLYDKLKDRKLNKGRDHLMWVLLQFISGSIQKNPLSDFLPVLKLYDLLYPDNTSIAVPDV
SKASSTHTVAATCIWIHLNMKANTDNVQLQRPIPHALREHQEALGQHLESLKQNLGNRSL
PGNDYRIPLLCNAYSTNPQLFNLPMSILVESICGNNSKNTCFLPGNLVAAHPTQPLSMNL
LDSLTVHAKMSLIHSIVSKVIRQAKSKSTAALAPALVETYSRLLVYMEIESLGIKGFISQ
LLPTVFASHAWGILHTLLEMFSYRLHHIQPHYRVQLLGHLHTLSTIPLTNQNQLHLCVES
TALRLITGLGSAEVQPQLSRIFNEPKTAGFLSQDSEELNRVLVLTLARAMHVTGSESFST
NWCKDILATIIQSTPHSWPSHTSTCFPTCLNEFFHQNPIPREDKVNLKRNVETEYKKWRS
MANEADIIAHFSMQGTPPLFLCIIWKNLIDDSRIAPIAYRVLERIGPRALSAHLRMFCDF
IVYEFCLAGNQSYFTRYIEAINDMVWKCNILTIDRLVLCLALRNLENNEAQIAFYIIYQI
LVRSSDFKNRVADFLRDNTPDHWLQSNWHDKHMTFHKNYPEKFFYEGIQDLNSPIQHQYL
PVYFGNICLRFIPVLDILIHRLIEMSSVQKFLESILDNLGGLYKFHDRPITYLYNTLHYY
DNKLANRSGLKRKLVGAIIRAHQEIHPNNWCLTEDYQRYLQMSADTTNWIPEQDYYIRLI
GRLVETIDGQSPFPSCDWRFNEFPNPAAHALHATCVELMALPVASQNVGAAILDVVLKSA
SQLPREKLMGWMNAVGLVLTALPETYWNVLNERIIETMQSSLLTNLGRSFFEMFDFLSCE
SMYVESTCTYVVALAHAVWHHAGIGQLSVLPQFVKEKVKGCIKSEEQFLFLLYLIGPFLS
RFHIERTRCLLDLTVELYEILANIDKLCDHLHHMDIITDFLYHIKYMFVGDGVKNEVDKV
IRNLRPALQLRLRFISHTNVDETPVATPRESISSAGLEPKGKYFGE
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgacagacatcgaggataaaatttctgctcaagtagcaagcacagttggcgaaatactg
agaggtgaagcaatagaagaggggttctcgggttatatcaagcataccccacaatcccta
cagaagaagattgaatataacacagatctattgtcaacgttatggacaaatataccacag
gacagccacaacataggactcaaagtgtatgctaatagctactttaatgtgaagaatgtc
aatcgtgttgacttactggccactttattggagactatggcagagaaaaatgtcttacaa
tccaagttcatctgtgaaacactgcttgatcatgaaaagatggtgtatatgaacacaaag
cctttcattagagctttccagttaatcaggaagcttgtagggggtgttgactataaggga
tgtcgagacttactgaggatgatactgcacaatcataacatagagacacaaaacgctaac
atcttaccacaggttgaggccatgatctcagtggtagcttacattttggaccgcaatgtt
tgtttgttaccaagctacttggctgttaatgaaattactaagatgagcccagaggtgaaa
aactggccccattggaagatgggcagactgctgtcagagtttgtttacagtttcaggcca
gttgctcagatggtcactatatcaggtcgatctcatctgttacctgttgttggacattct
gtggccacaaataatgtatggaggttgaattccaaagatttaaaattctccttaagcgga
ccactaccttatagtagggaggtgcaggaaccacagtcaggacttctgcgctacgttttg
gagcaaccatactctagagatatggtgggcagtatgcttggactaaataaacaggtgaag
cagagatgtgaagtattagaagaacaacttgttaatcttgtggtatcagcaatggagcat
tcggagaacttagactcatcagcagatccaggtttgagccaccttctctggcagcatctg
tccagtcagctcatatacttcgtgctcttccagtttgcctcatttcctcatatggttatt
tcattatatgacaaattgaaggacagaaagttgaacaaaggaagagaccatctgatgtgg
gttctattacagtttatctctggcagcatacagaaaaacccgctgagtgattttctacca
gtattaaagctgtatgacctcctgtacccagacaacacatcaatcgccgtgccagatgtc
tctaaggccagctccacccacactgtggcagctacatgtatttggatacacctcaacatg
aaggcaaacacggacaatgtacagcttcagagacctataccacatgctctcagagaacat
caggaagctctaggacaacatttagagagcttaaaacagaatcttggtaacagaagtctg
ccgggcaatgattacaggatccctctactctgtaatgcatacagtactaatccacagctg
ttcaacctgcccatgagtatcttggtggaaagtatctgtggcaacaacagtaagaataca
tgcttcctccctggtaatctggtagctgctcatcctacacaacccctgtctatgaacctg
ctcgattctctcacagtacatgccaaaatgagtcttattcacagtatagtctccaaagtg
atccgtcaggccaaaagcaagagcacagcagctctagcaccagcattagtcgagacttac
agtcgtctcttggtctatatggaaatagaatctcttggaataaaagggtttatcagccaa
ttacttccaactgtgtttgcaagtcatgcctggggcattcttcataccctcttagagatg
tttagttaccgtctgcatcacatccaaccccactatcgtgttcaacttctgggacatctt
catacattatctaccatcccattgaccaaccagaatcaactacacctctgcgttgagagc
actgctttaagactgattactggtcttggcagtgcagaagttcagccccagttgtccagg
atcttcaatgaaccaaaaacagctggtttcctttctcaggattctgaagagttaaaccgg
gttctagtccttactctggcccgtgcaatgcatgtaacagggtcagagtcattctccact
aactggtgtaaggacatcttggcaacaataatacagagcacccctcactcctggccatcc
cacacctctacttgcttccccacatgcctgaatgaattctttcatcagaatcccatccct
agagaagacaaggtaaatctgaagagaaatgtagaaacagagtacaaaaagtggcgaagt
atggccaatgaagcagacatcatagctcacttcagtatgcaaggtacaccaccattgttc
ctttgtattatctggaagaacttgattgatgacagcaggattgctcccatagcatacaga
gtactggagagaataggaccaagagctctgtcagctcacctacgcatgttttgtgatttt
atagtgtacgagttctgcctagcaggtaaccagagttacttcacacgttacattgaagca
atcaatgacatggtttggaaatgtaacattctcaccattgacaggcttgtcttgtgtctt
gcactgagaaatctggaaaataatgaagcccagattgctttctacatcatttaccaaatc
cttgtcagatcatctgatttcaaaaaccgagtggctgatttcctgcgagacaatacacca
gaccactggctacagagcaactggcatgataagcacatgacattccacaagaactatcca
gagaaatttttctatgagggaatccaggacctgaacagccctatacagcatcagtatctg
ccagtgtactttggtaacatctgtctgagatttattccagtcctagatatcctcattcat
cgtttgatagaaatgtcctctgtccagaagtttctcgagagtattttggacaatttaggc
ggattgtataagttccatgatcgacccatcacgtatttgtacaacacgttgcactactac
gacaacaagttggctaacaggtcgggtctgaagagaaaactggtaggagcaattatcaga
gcacatcaagaaattcatcccaacaactggtgtcttactgaggactatcagcgctactta
cagatgtcagcagatacaacaaactggattccagagcaagattactacatacgtttgatt
ggacggcttgtggaaactatagatggtcagtcaccatttccaagctgtgattggcgcttc
aatgagtttcctaacccagcagctcatgccttacatgctacttgtgttgaactaatggct
ctaccagtagccagtcagaatgtgggagcagccatcttagatgttgttttgaagagtgct
tctcagctgcctagagaaaaactgatggggtggatgaatgctgtgggtctcgtgctcaca
gctctgccagaaacctactggaatgtcctgaatgaacgcattattgaaacaatgcagagt
tccttacttacaaaccttggccgtagtttctttgagatgttcgacttcctgtcatgtgaa
agtatgtatgtagaatcaacatgcacatacgtggtggctcttgctcatgctgtgtggcat
catgcaggcattggtcagctgagtgtactgcctcagtttgtcaaggagaaagtcaaagga
tgtatcaaatcagaagagcagttcttattcctcttgtacttgatcggaccatttttatcg
cggtttcacatagagagaacaaggtgcttgctagatctcactgtagaactttatgagata
ttagcaaatatcgacaagttgtgtgatcatttacatcatatggacataattacagacttt
ctttaccacatcaagtacatgtttgttggagatggggtgaaaaatgaggtcgacaaggtg
attcgtaacttgaggccagctttacagctgagattaagattcatttctcatacaaatgtt
gatgaaactccagtagctacaccaagggagagcatttcgtctgctggactcgaaccaaaa
ggaaaatactttggtgaataa
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