Mercenaria mercenaria (northern quahog): 123524466
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Entry
123524466 CDS
T07835
Name
(RefSeq) TATA-box-binding protein-like 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123524466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123524466
03021 Transcription machinery [BR:
mmer03021
]
123524466
Transcription factors [BR:
mmer03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
123524466
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123524466
RNA polymerase III system
TFIIIB
123524466
RNA polymerase I system
SL1/TIF-1B
123524466
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Peptidase_M55
AstE_AspA_hybrid
Motif
Other DBs
NCBI-GeneID:
123524466
NCBI-ProteinID:
XP_045158615
LinkDB
All DBs
Position
2:39619565..39620092
Genome browser
AA seq
175 aa
AA seq
DB search
MIITNVVYSAHLDCAIDLRRLCYRISNARYDPRTFPGLIWQHKTIGGNCLVFSNGVINCN
GKATSIQQGRQRLRRYARRIQRLGYTVCLKEIKCITVSASHTLSTTLDLNQLVKERQTVY
EPELFSAVNLKNDGVNFCCFHSGKVVITGIKDHTQLDDVVYPVLIELELYTRKKE
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgattatcaccaacgttgtgtacagtgcccatttggactgtgctattgacttgaggcgc
ttgtgttatcgtatatcaaacgctcgttacgatcctagaacattccctggactgatctgg
caacacaagaccataggaggaaattgcttagtcttctccaacggcgttatcaactgtaat
ggaaaagcgaccagtattcaacagggacgtcaaagactaagacgttatgccagacgtata
cagcgattagggtacacagtgtgtctgaaagagatcaaatgcataaccgtgtcagccagt
cacaccttaagtaccaccctagacttaaatcagttggtaaaagaaagacagaccgtgtat
gaacccgaactattttcagcggtgaatttaaaaaatgatggagtcaatttttgttgtttt
cacagtggtaaagtggtcattactggaatcaaagatcacactcaactagatgatgtggtc
tacccagtattaattgaactggaactctacacgcgtaagaaggagtga
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integrated database retrieval system