Mercenaria mercenaria (northern quahog): 123524626
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Entry
123524626 CDS
T07835
Name
(RefSeq) structural maintenance of chromosomes protein 6-like isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123524626
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
123524626
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_15
PUMA_CC
DUF745
AAA_29
Fez1
Tup_N
Motif
Other DBs
NCBI-GeneID:
123524626
NCBI-ProteinID:
XP_045158886
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Position
3:complement(58802490..58852738)
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AA seq
1175 aa
AA seq
DB search
MKRKNQQEGGSRSKRRATEESSDEEEEHLPVAKVARRDGHSSGPSRGGAGSSEEDDVMDM
SQRPDFPVDSKEADVGIIEKVSLKNFMCHNRLDIPLGPNINFIVGNNGSGKSAVVTALVV
GLGGKAAVTNRGSKLKSFVKTGKQVAEVEIKLRNRGPDAFRPDLYGDTISVRRKFNADGS
TQYKLVSKSGKVISTKKDDLTRILDQFNIQVDNPVAVLNQDTSRNFLNSKSPQDKYKFFL
KATQLEQIKEDYSTASDRKELTKEIIAVKMQTLPKLEKEVLDWEQKYKSLTAIKELENKT
KRLKEEMAWALVIEKEKGMTPLEKEFKHEEARLPRFKSKADEAKGSLDTMNKQMQELTAK
LNVSGEEVKQLQPAHQEARNALNEQKKITRNAHMEVKRLESALKNLKKEKQSIVERIAEI
QTSSRHDYEKERKGRMKKIEVLEGKLASIQAQETTTDHQLDQFRNAIQKYKNDRFKLGQD
QQVSQTQIDKHQKNLQSLRASQGNRLKRFGSFMPQLIQTVEEYARLGRFHKKPIGPLGAC
FTLADQKWALAVECCLKGLMNSFCCHDYHDEKVLEQIISNVSPNYKPTIIVSRFKDRVYD
VSEKRADNSKFRSVLDMVKCDHPMVYNTLIDQRTVECVLLIEDGRLARQVMDPDKRPGPP
RNSREAFTAQGDQVFSFPTFRYYSSNQDKAKFLTANVEEDIAALVSQVEALQQTLGQIRQ
QKVQLDSEIQINTREERKAETTLMKIREEKRKLSLEISELKNIEDPAPVDVATYEEEVKM
LEEQLSSHQLQLESKTTIHKEQEQLQENLQEQYKQIDVQIRSKIDAGDAIKEEVGNVVNE
IETCKTNKKHYDSKLKEQEKKIKELKDKLDKYKVEVESDVEKAQTIHSERINTRRSPSNL
KSEILQIEKQIKNEERRRGDPEEITRQYKEKKDSYLKIKCEVKQLRKFIEELEKSLKKRQ
KAHRILLQSLSWRVKVYFNGVLNSNPAFEGKLEISNKHKFIHLNRLDSILGKRLESYTEF
RRMIAVRAKYFFIVLLANRQYTGKMTFNHKNETLEMTVQPSKTAGTEGAKDLRSLSGGER
SFSTVCFILALWDAMESPFRCLDEFDVFMDMVNRRISMEMMMKTARTQTERQFIFLSPQS
MSNLGIASTKMMKIFKMPNPERGQKTIEFPSTSDE
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaagaatcagcaggagggtgggtctagatcgaagagacgagcaacagaggaa
agtagcgatgaagaagaggagcatttgccagtggcgaaggttgctaggcgtgatggtcat
agcagtggccctagtcgcggaggtgcaggtagcagtgaagaagatgatgtcatggatatg
tcccaaaggcctgacttccctgttgactcaaaagaggcagatgttggcattattgaaaag
gtttcactcaagaatttcatgtgtcacaatcgtctagatatccccttaggaccaaatatc
aattttattgttggtaacaatgggagtggtaaaagtgctgtggttactgcactagttgtt
ggtctggggggcaaggctgctgtcactaacagaggatccaaactgaaaagctttgtcaaa
actggaaaacaggtcgctgaggtagagatcaagttgcgtaatcgaggaccagatgccttc
cgtcctgacctttatggagacactataagtgtgagacgcaagttcaatgcagatggaagc
actcagtacaaactggtgtcaaaaagtggaaaagtaatatcaacaaagaaggatgatctg
acaagaatattggaccagtttaatatacaagtagataatccagttgcagtattaaaccag
gacacctctaggaatttcttaaatagtaaaagtccacaggacaaatacaagtttttcttg
aaagctacgcagttagagcaaattaaggaagactacagtacagcatctgatcgtaaggaa
ttgacaaaggaaataatagctgttaaaatgcagacattaccaaaactggagaaagaagta
ttagactgggaacagaaatacaagtctctcacagccattaaagaactagagaacaagaca
aaaagactgaaagaggagatggcatgggcacttgttatcgaaaaggaaaagggtatgaca
ccattggagaaagaattcaagcacgaggaagcaagacttccgaggtttaaatcaaaagca
gacgaggccaagggtagtctagacacaatgaataaacagatgcaagagttgacagcgaaa
ttgaacgtgtccggcgaggaggtgaagcaactacaaccggctcaccaggaagctagaaat
gccctgaatgaacagaagaaaatcaccagaaatgctcatatggaagtgaaaagacttgaa
tcagcactcaagaatctcaaaaaggagaagcagtctattgttgaacgtattgcagaaata
caaacaagttctcgccacgattatgagaaagaacgtaaaggaaggatgaagaagatagaa
gtactggaagggaaacttgctagcatacaagcccaggaaacaactacagatcaccagcta
gatcagttcagaaatgcaatccagaaatacaaaaatgatagattcaaactgggtcaagac
cagcaagttagtcagacgcagatagataagcatcagaagaatctccagtccctgagagca
tcccagggtaacagacttaaacggtttggatcattcatgcctcagctgatacagactgta
gaggaatatgctcgacttggaagattccataagaaaccaatcggtccattaggggcctgt
tttacattagctgatcagaaatgggctttggccgttgaatgctgtcttaaaggtctgatg
aactccttctgttgtcatgactaccatgatgagaaagttctagaacagattatctccaat
gttagcccaaactacaaacctaccataatagtcagcagattcaaggacagagtctatgat
gtttcagaaaagcgagctgacaattcaaagttccgatctgtactagatatggtaaaatgt
gaccatcccatggtgtataataccctaattgatcagcggactgtagagtgtgtattattg
atagaagacgggagattagctagacaggtgatggaccctgataagaggccaggtcctccc
aggaattctagagaggcatttacagctcagggagatcaagtattcagctttccgacattt
aggtattactccagtaaccaggataaagcgaagtttcttactgccaatgtggaagaagat
attgctgcactagtcagtcaggtggaagccttgcagcaaacattaggtcagatacgacag
cagaaggtccagctcgattccgagattcagatcaatactagggaggaaagaaaagctgaa
acaacactgatgaagataagagaggaaaagagaaaattgtcactggaaataagtgaattg
aaaaacattgaagatccagcacctgttgatgtagcaacctatgaagaggaggtaaagatg
ttagaagagcaactttccagccatcaacttcagttagaaagtaagacaacaatacacaag
gaacaagaacagttacaagagaacctgcaggagcagtacaagcagattgacgtacagatc
agatcaaagattgatgccggagatgctatcaaggaggaagtaggaaatgtggtgaacgag
attgagacatgtaaaacaaataagaaacattatgacagcaagcttaaagagcaggaaaag
aaaatcaaagaactgaaagacaagctggataaatacaaagtagaagttgagagtgatgta
gaaaaagcacagactattcacagtgaaagaataaatacccgccgatcaccatctaatctg
aaaagtgagattcttcagatagaaaaacaaatcaaaaatgaagaaagaaggcgaggtgat
cctgaagaaataacaagacagtataaggaaaagaaggattcctacctgaaaataaagtgt
gaagtgaagcagcttagaaaatttatcgaggaactcgaaaaatcactaaaaaagcgacaa
aaagcgcacaggattttgcttcagtccttatcgtggagggttaaagtgtactttaatgga
gtactgaatagcaatccagctttcgaaggaaagctggaaatctcaaataagcataaattt
atacatttaaataggttggacagcattctagggaaacgactcgagagttatacagaattt
cgccgcatgattgctgtgagagcaaagtacttcttcattgtgcttcttgccaatagacag
tacactggcaaaatgacatttaatcataaaaatgaaacccttgaaatgacagtgcagccc
tcaaaaactgctggcactgaaggtgcaaaggacctgaggtccctctcaggaggtgagagg
tcattctccaccgtctgctttatccttgctctctgggacgccatggagtcacctttcaga
tgcttggacgagtttgatgtgttcatggacatggtaaacagaaggataagtatggaaatg
atgatgaaaactgctcgcacacaaacagagaggcagttcatattcctgtctccacaaagc
atgagtaatcttggcattgcatctacgaaaatgatgaagatattcaaaatgcctaatcca
gaaagaggccagaaaaccatagagttcccgtcaacaagtgatgaatga
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