Mercenaria mercenaria (northern quahog): 123524821
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Entry
123524821 CDS
T07835
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123524821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123524821
03016 Transfer RNA biogenesis [BR:
mmer03016
]
123524821
Enzymes [BR:
mmer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
123524821
Messenger RNA biogenesis [BR:
mmer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
123524821
Transfer RNA biogenesis [BR:
mmer03016
]
Prokaryotic type
tRNA degradation factors
123524821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
NBAS_11th
Motif
Other DBs
NCBI-GeneID:
123524821
NCBI-ProteinID:
XP_053393907
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All DBs
Position
1:2146164..2226592
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AA seq
767 aa
AA seq
DB search
MAAPMTFFRRRCFFIFSLYRQPLRQYAKETSNGGKVPKSSILHINENKRLYLEFGQMAKF
ADGSVVAKYGDTAVLVAVTSRTESMPNAQFLPLTVDYRQKSAAAGRIPTNHLRRELGPTD
KEILTSRVIDRSLRTLFPGDYFNETQITCNLLSVDGVNDPDVVSINAASAALTFSDVPWN
GPVGAVRVGHVKDTDSFVINPTRKEQQHSDLNLVIATDVDENVVMLEGDANNISYDLFKK
AISFGAKSATDLARQLNRLKYTKPKKRLYSQPAGLPDGMAEEAAKHGSKMIKAVLNNSSH
DKISRDKALQKARYSIIEKLSDTYTESQQVQQLHEALNGLVKQTLRDQIISDKKRCDGRQ
LKDLRQISAKVDLFSPLHGSALFQRGQTQVLSTVTFDSLQAAMKLDPVSVLTGAMKEKNF
MLHYEFPAYATNEVKAPGIKNRRELGHGALAEKGLRAIIPDNFPFSIRLTCEVLESNGSS
SMASICAGSLALMDAGVQIKEPAAGVAIGLVTSDAVDLAPNGNKYYLLADILGIEDYFGE
MDMKVGGTKNGVTAIQMDLKIPGIPVSTVHEALYLAKAKISHIISIMKNSAKIDVPRESI
KSNGPVLEKITVPPSKRGSFVGTGGMNLKKLRSDAGVTVTPLDESTYEIFAPNKDAMDEA
KEMMDTWLEAKKEPELEFNAVYEAKITELKDFGVMVQLHPAMEPVLLHNSQLDHRQVSHP
SALGFEVGQIISVKYFGRDPATGKMRLSRKVITAPSSRTFKFMKDES
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccccatgacatttttcagaagacgatgcttttttatattttctttatatcgg
cagccattaagacaatatgccaaggaaacaagtaatggagggaaagtgccaaaaagctcg
atattacacataaatgagaataaaaggttgtacctggaatttggtcagatggcaaaattt
gcagatggttctgtagttgcaaagtatggtgatacagcagtgctggttgcagttactagc
agaacagaatccatgccaaatgcacagtttcttcctttaacagttgattatagacagaag
tcagcagctgcaggtcgtataccaacaaatcatctaagacgagaacttggacctacagat
aaggaaatattaaccagtagagtcatagataggtcattgaggacactttttcctggtgat
tactttaatgaaacacagataacttgtaacctgttgtctgttgatggggtgaatgatcca
gatgttgtaagcataaatgcagcatcagcagccctcacattttctgatgttccttggaat
ggacctgttggtgcagttagagttggtcatgtcaaagatactgacagttttgtcataaat
ccaacacgtaaagaacagcaacatagtgaccttaatttagtaatagcaacagatgtcgat
gaaaatgtagtgatgttagaaggtgatgcaaacaatatatcatatgacctgtttaagaag
gcaatcagctttggcgccaaaagtgccacagacttagccagacagctaaacagattaaaa
tacactaaaccaaagaaaagattgtacagtcagccggcaggattaccagatggtatggct
gaagaggcagcaaagcatggtagcaaaatgataaaagctgttttgaacaattcatcacat
gataaaatatccagagataaagcattacagaaagcaagatatagcattatagaaaaatta
tcagatacatatacagagagtcagcaagttcaacaacttcacgaggctttaaatggtctt
gtcaaacaaacattgagggatcaaattattagtgacaaaaaaaggtgtgatggtcgacaa
ctgaaagacctgagacagataagtgctaaagtagatctgttcagtccactccatggttct
gccctgttccagaggggtcagacacaagtactgagtactgttacatttgattcactacag
gcagccatgaaacttgatccagtctcagtacttactggggccatgaaagaaaagaatttc
atgctgcattatgagttcccagcctatgcaacaaatgaagtgaaagctcctggaattaaa
aacagacgagaacttggtcatggtgctttggcggagaaaggactacgtgcaataattcct
gataactttcccttcagtatacgattgacttgcgaggttttagaatcaaatggctcttcc
tctatggcatctatatgtgcaggaagcttagcgctgatggatgctggggtccagataaaa
gaaccagctgctggtgttgctataggactggtaaccagtgacgctgtagatctggcacct
aatgggaacaagtactaccttctggcagatattttgggtatagaggactattttggtgag
atggacatgaaagtagggggaactaaaaatggagttactgcaatacagatggatctaaaa
atccctggaattcctgtttcaactgttcatgaagctttatatttagcaaaagctaagata
tcacatatcataagtataatgaagaattccgcaaagattgatgttcctagagaaagtatc
aaaagtaatggtccagtattagaaaagataacagtaccaccatcaaagagaggtagtttt
gttggcactggcggaatgaatctcaaaaagttgagatcagatgcaggtgtaactgtaacg
cctttagatgaatctacctatgaaatatttgcaccaaataaagatgcgatggatgaagcc
aaggagatgatggatacttggctagaagcaaagaaagagccagagttggagttcaatgct
gtttatgaagctaaaattacagaactaaaagactttggtgtaatggtacagcttcatcct
gccatggaaccagtgttgttacataactcacagttagatcatagacaggtatcacaccca
agcgcacttggatttgaagtcggtcagattatctcagtgaaatattttggtagggatccg
gcaacaggaaaaatgcgactctcacgtaaagttatcacggcaccttcttccagaacattt
aaatttatgaaagatgaaagttga
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