KEGG   Mercenaria mercenaria (northern quahog): 123524821
Entry
123524821         CDS       T07835                                 
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
mmer  Mercenaria mercenaria (northern quahog)
Pathway
mmer03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    123524821
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmer03019]
    123524821
   03016 Transfer RNA biogenesis [BR:mmer03016]
    123524821
Enzymes [BR:mmer01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     123524821
Messenger RNA biogenesis [BR:mmer03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     123524821
Transfer RNA biogenesis [BR:mmer03016]
 Prokaryotic type
  tRNA degradation factors
   123524821
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase KH_1 S1 NBAS_11th
Other DBs
NCBI-GeneID: 123524821
NCBI-ProteinID: XP_053393907
LinkDB
Position
1:2146164..2226592
AA seq 767 aa
MAAPMTFFRRRCFFIFSLYRQPLRQYAKETSNGGKVPKSSILHINENKRLYLEFGQMAKF
ADGSVVAKYGDTAVLVAVTSRTESMPNAQFLPLTVDYRQKSAAAGRIPTNHLRRELGPTD
KEILTSRVIDRSLRTLFPGDYFNETQITCNLLSVDGVNDPDVVSINAASAALTFSDVPWN
GPVGAVRVGHVKDTDSFVINPTRKEQQHSDLNLVIATDVDENVVMLEGDANNISYDLFKK
AISFGAKSATDLARQLNRLKYTKPKKRLYSQPAGLPDGMAEEAAKHGSKMIKAVLNNSSH
DKISRDKALQKARYSIIEKLSDTYTESQQVQQLHEALNGLVKQTLRDQIISDKKRCDGRQ
LKDLRQISAKVDLFSPLHGSALFQRGQTQVLSTVTFDSLQAAMKLDPVSVLTGAMKEKNF
MLHYEFPAYATNEVKAPGIKNRRELGHGALAEKGLRAIIPDNFPFSIRLTCEVLESNGSS
SMASICAGSLALMDAGVQIKEPAAGVAIGLVTSDAVDLAPNGNKYYLLADILGIEDYFGE
MDMKVGGTKNGVTAIQMDLKIPGIPVSTVHEALYLAKAKISHIISIMKNSAKIDVPRESI
KSNGPVLEKITVPPSKRGSFVGTGGMNLKKLRSDAGVTVTPLDESTYEIFAPNKDAMDEA
KEMMDTWLEAKKEPELEFNAVYEAKITELKDFGVMVQLHPAMEPVLLHNSQLDHRQVSHP
SALGFEVGQIISVKYFGRDPATGKMRLSRKVITAPSSRTFKFMKDES
NT seq 2304 nt   +upstreamnt  +downstreamnt
atggctgcccccatgacatttttcagaagacgatgcttttttatattttctttatatcgg
cagccattaagacaatatgccaaggaaacaagtaatggagggaaagtgccaaaaagctcg
atattacacataaatgagaataaaaggttgtacctggaatttggtcagatggcaaaattt
gcagatggttctgtagttgcaaagtatggtgatacagcagtgctggttgcagttactagc
agaacagaatccatgccaaatgcacagtttcttcctttaacagttgattatagacagaag
tcagcagctgcaggtcgtataccaacaaatcatctaagacgagaacttggacctacagat
aaggaaatattaaccagtagagtcatagataggtcattgaggacactttttcctggtgat
tactttaatgaaacacagataacttgtaacctgttgtctgttgatggggtgaatgatcca
gatgttgtaagcataaatgcagcatcagcagccctcacattttctgatgttccttggaat
ggacctgttggtgcagttagagttggtcatgtcaaagatactgacagttttgtcataaat
ccaacacgtaaagaacagcaacatagtgaccttaatttagtaatagcaacagatgtcgat
gaaaatgtagtgatgttagaaggtgatgcaaacaatatatcatatgacctgtttaagaag
gcaatcagctttggcgccaaaagtgccacagacttagccagacagctaaacagattaaaa
tacactaaaccaaagaaaagattgtacagtcagccggcaggattaccagatggtatggct
gaagaggcagcaaagcatggtagcaaaatgataaaagctgttttgaacaattcatcacat
gataaaatatccagagataaagcattacagaaagcaagatatagcattatagaaaaatta
tcagatacatatacagagagtcagcaagttcaacaacttcacgaggctttaaatggtctt
gtcaaacaaacattgagggatcaaattattagtgacaaaaaaaggtgtgatggtcgacaa
ctgaaagacctgagacagataagtgctaaagtagatctgttcagtccactccatggttct
gccctgttccagaggggtcagacacaagtactgagtactgttacatttgattcactacag
gcagccatgaaacttgatccagtctcagtacttactggggccatgaaagaaaagaatttc
atgctgcattatgagttcccagcctatgcaacaaatgaagtgaaagctcctggaattaaa
aacagacgagaacttggtcatggtgctttggcggagaaaggactacgtgcaataattcct
gataactttcccttcagtatacgattgacttgcgaggttttagaatcaaatggctcttcc
tctatggcatctatatgtgcaggaagcttagcgctgatggatgctggggtccagataaaa
gaaccagctgctggtgttgctataggactggtaaccagtgacgctgtagatctggcacct
aatgggaacaagtactaccttctggcagatattttgggtatagaggactattttggtgag
atggacatgaaagtagggggaactaaaaatggagttactgcaatacagatggatctaaaa
atccctggaattcctgtttcaactgttcatgaagctttatatttagcaaaagctaagata
tcacatatcataagtataatgaagaattccgcaaagattgatgttcctagagaaagtatc
aaaagtaatggtccagtattagaaaagataacagtaccaccatcaaagagaggtagtttt
gttggcactggcggaatgaatctcaaaaagttgagatcagatgcaggtgtaactgtaacg
cctttagatgaatctacctatgaaatatttgcaccaaataaagatgcgatggatgaagcc
aaggagatgatggatacttggctagaagcaaagaaagagccagagttggagttcaatgct
gtttatgaagctaaaattacagaactaaaagactttggtgtaatggtacagcttcatcct
gccatggaaccagtgttgttacataactcacagttagatcatagacaggtatcacaccca
agcgcacttggatttgaagtcggtcagattatctcagtgaaatattttggtagggatccg
gcaacaggaaaaatgcgactctcacgtaaagttatcacggcaccttcttccagaacattt
aaatttatgaaagatgaaagttga

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