Mercenaria mercenaria (northern quahog): 123524847
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Entry
123524847 CDS
T07835
Name
(RefSeq) WD repeat-containing protein 36-like
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123524847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmer03009
]
123524847
Ribosome biogenesis [BR:
mmer03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
123524847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Cytochrom_D1
Utp12
Beta-prop_Vps41
WD40_RFWD3
DUF6969
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
123524847
NCBI-ProteinID:
XP_053395667
LinkDB
All DBs
Position
3:49312049..49344039
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AA seq
457 aa
AA seq
DB search
MSVLVLHPYDSCGLENGRNIGLRKRCNRITGIYKLNISQTHESCVQGIAIDGLNQLTISA
GREGDIKFWKFKDRVMLETCKLDSTVSKILLHRESSMLAVARDDFHVYIIDADTRKVVRK
FVGHDNRITDMTFSTDARWLVTAAMDCSLRVWDLPTGRPIDCFLVDSAVTSLSMSPTYDF
LATCHLDDVGVYLWANKTLFSHVPLTALPANYEPQIIEMPSTRKHTAAESVDEEAQDEEE
EFIRAEFKSAEQISHELVTLSLLPNSRWQNLLNLDIIKQRNKPKEPPKAPKAAPFFLPTV
AGLEPKFAVDEDASKKEAKSKLEAGNLMPLCTLGQLLKRGNSSKNYDKVLEYMKTLGPSA
VDVEIRSLAPEMGGSVSVMCSFLQFVQSVLDTNKNFEIIQAYLGLFLKVHSDILSSESEL
VKELEKLSALQSSSWCAVQDLFNQTLCLVNYLRTAVI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtattggtgttacatccctatgatagttgtggcttggaaaacggaagaaatatt
gggttacgcaaaaggtgtaatagaattactggaatatataagcttaacatttctcaaaca
catgaatcctgtgtacagggtatagctattgatggattaaatcagctgactatctctgct
ggcagagagggagatataaagttctggaaatttaaagacagagtgatgctagaaacgtgt
aaactggactctacagtttctaaaatactccttcaccgggaaagttctatgttggctgtt
gcccgggatgatttccatgtatacatcatagatgctgataccagaaaagttgtgagaaaa
tttgtaggtcatgataacagaataacagatatgacattcagtacagatgcaagatggtta
gtcacagcagctatggattgttctctcagagtctgggatctaccaactggcagaccgatt
gattgtttcttagtggatagtgctgtgacctcactctcaatgtcacctacatatgatttc
cttgccacatgtcaccttgatgatgttggggtttacctctgggcaaacaaaacactgttt
tcacatgtgccactcacagctctgccagcaaactatgaaccacagataattgaaatgcca
tcaacaagaaaacatactgcagctgagagtgtcgatgaagaagcccaggatgaggaggag
gaatttatccgagccgagttcaaatctgcggagcagatcagtcatgagttagtgacactt
tctcttctgccaaattcaagatggcagaatctgcttaacttagatataatcaagcaaaga
aacaaacctaaagagccacctaaggcccccaaggcagctccattcttcctaccaactgtg
gcaggcctggaaccaaagtttgctgttgatgaagatgccagtaaaaaagaagctaagtca
aagttggaggcaggaaatcttatgccattgtgtacactaggacagctattgaagagaggc
aactcaagtaaaaattatgataaagttttggagtacatgaagacgctcggtccgtcagct
gttgatgtagagattcgctccctggccccggagatgggaggatcagtatcagtcatgtgc
agtttcctacagtttgtgcagtcagtccttgataccaacaagaactttgaaataattcaa
gcctatttagggttgtttctcaaggtacatagtgatatattatccagtgagtcagagctg
gtgaaggaactggaaaagttgtcagcactacagtctagttcatggtgtgcagttcaggac
ttatttaatcaaacattatgcctagtgaactaccttaggactgcagtgatatga
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