Mercenaria mercenaria (northern quahog): 123524915
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Entry
123524915 CDS
T07835
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04512
ECM-receptor interaction
mmer04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123524915
04518 Integrin signaling
123524915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
mmer04091
]
123524915
Lectins [BR:
mmer04091
]
C-Type lectins
Lecticans
123524915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
123524915
NCBI-ProteinID:
XP_045159464
LinkDB
All DBs
Position
3:44405026..44468591
Genome browser
AA seq
2188 aa
AA seq
DB search
MGLPMRGARICVLFLVCMCPAFIRAGLVVRTNALTVKVGRTVYLNTDDIVIKNMKRKDEV
CRIEVVQNDPITQRVGKLEPKIFDCSYQANTVKYIHDGSPFLSEDRIKLRVHRFTNRKTV
TETFYLGVKVSNASTEIVVTRGLRHVIVPEFNGISNTIDASVLRFYRSRTPNVSCTVSFD
NSKHWPLVGHIIMGDRRTPIETIKTSCQEFLFMELRYEHLQKPTPDVDYFPLNIELHDPE
NSDELKTERFFLPIYIKNALLNSPPRSSYKSMYMMDVDQFVLSTIIPGIISAEDYETPDH
SLVYNISKPSRPNQGYFVHLDDQTTEISSFLQDDLENHLIAYQPPNTSFSERKIYEVELK
VYDSHFAESMPIVLHIAVRPSSSNAPRVSCNTGLVLLEGQSREINSNNLQIVDNNNPNDI
RVYITDGLKHGQLVLNNEAITFFTISDLVQGNVRYVHDDSESERDFIKLKISDGAKHTVV
KFPITIIPKDDSPPYIVNNLGIELNEGQTKRIDPSNLLAHDPDSIDMTITYVIAQPTAAG
EMIRKTRASDSGTRVNRFTQRELQKGQIYYRHFGREDFHDEFLFTLRDQQDPPNESILET
FYIAINPVNENPPQLSPEATRLMRVSETDIALITKSELEYTDKETGSDRLTYIITVPPYF
VYSNRRNRREDAGRIIALHNLTMLSKNKNISPVATFKQEDINYLKIGYMPPMKDIGPEPR
LVRFVYTVQDASGNKVLGQQFDIDIQPVNDKAPEFQSSKMLVEEGGILGISTNHIFAVDV
DTNEADLTFILEDLPNHGRLQKGGNNLLEKDTFSMLDLRKKDLRYIHDGSEVTSDTFTLS
LTDGANRVSKVFQVEIVPIDDVAPKLKENLKPHLIVSEGSEAVINSNVLSATDEDTDEGM
LVFLIVKQPKYGIMQLNGEPVTKFTQQDVKEGSVHYIHSSGEIGSQIIRDSVAFIVSDQH
YKASADLPMYNLNITITPVDNQKPIIIAGMPIVVEEGMKFNLSPDYITAKDPDTEPESIQ
FVITSQPQYGYLENIKPNPGSEKSNAGNPVLTFKLQDVIDKSINYVQATHKGVEPTTDRF
EFYATDGKLNSFSHTASITIRPTNDEEPDVMLNDFSVPEGGSKIIDRSMVDAIDMDKPKE
KIMLSISQPPEHGDIVVMLHTPNGDIQAAVSMFSADELHQGMKLKYIHDDSEHYTDKFAI
TVSDGKHEVKKVCNVTVEPINDEIPEIIKNAGLHMDYGEQSVLSSVVLQSVDIDNTDDQV
YYIIVTVPKKGVLQFCSDSNEPMFSEKCRDIWVGHNFTQRDINNNRVRYLHTTGMSGSEF
DNFMFILTDGQNKRHAETFQIKILNSKRANIALINNGLDVQEGERAVISTVSLSASDEST
RAEEIVFAVIRPPNLGQLEYIDRNLIGISSFTQMDLASGKLVYNHLTKTDFTDDSFTFTV
TNGMSDTKDSEFHIRIEPIDKELPSLINNELIEVLQGAEIPITSNKLKADDPDTDSSNVT
YLIDKQPTFGRLYNRGVYITSLFTQSAIDRGFITYESDGSHTGLDNFLFTLSDGKHDGFL
INGTLQLKQVFCRIYTKPLVNDAPKLITNQHPEVLEVFEDGRYGFHLNNNVLKAVDSDTM
NTNLVYVIEQRPKHGHLENSEAKRYVRRRFTQRDLDENALQFIIDMKDKDTNDSFTFKIE
DSRGNSLNNQRIDFHWSFIELDKAGLVVCENIGTLPITLTRMGDLSGVAFVGIEAQDRTT
RMNDDYRPSSSRQVQFDPGVSSVTWNIQVFDDGIEENTENFVVYINDPVNAILGRKRKIR
IRLINADDGECPQYIGMISKHQPSIPDSLYLPGNAIESKTETVILGNQFKRLTQQKSHHD
NTLLSDPAETSEVGANKPKTADNEENPTNVQKKDKKKRRKKRKERKARKDRKKKSRKGRR
KNKNREVEAEKDIAEPATGNLVSGQLMQNVDINAPQECTRTTGGLLYFDPGTQQMYKCNG
DAWQAWSPASNQDQQPETRECQQGWSKYGNRCFKFINERLTWEVAETLCQMSYGANLATV
QSQDHQEWVSKLAGKKAYWIGLSSNADTGRWSYSNGEALSFSNWKSGGQRVKRTLSRKTC
VIVDKKRKWRNKICSKRKARFVCEIDIGAGDLSRSPPKRDTSRSRERRRRKNRLRDRQND
QIHTSYREKDSRRYPKTHSKERGFFFGE
NT seq
6567 nt
NT seq
+upstream
nt +downstream
nt
atggggttaccaatgcgcggtgcacggatatgcgtattattccttgtttgtatgtgcccg
gcgttcatcagagcggggttggtcgtacggacaaacgctttaactgtaaaagtgggacgc
acagtttaccttaatacagatgatattgtgataaagaatatgaaacggaaagatgaagta
tgtcggatagaggttgtacagaatgatccaattacgcaacgtgtaggaaaactggaacca
aagatttttgactgttcctaccaagcaaatacggtcaaatatatccacgatggctctccg
ttcttgagcgaagataggatcaaacttcgtgttcatagatttaccaaccgaaagactgta
acagaaacattctacctcggtgtcaaggtcagcaatgcttcaacagaaattgtagtgaca
cgtggtttacgtcacgtgatagtcccagaattcaatggaatctctaacactatagacgct
tcagtgctgcgattttatcgcagtaggactccgaatgtttcatgtactgtaagttttgac
aatagtaaacattggccattggtaggacatatcattatgggtgaccgaagaacaccgatt
gaaacaattaaaacgagctgtcaagagtttctatttatggaactgcgctacgaacatcta
caaaaacctacgccagatgtagattatttccctttgaatatcgaactacatgatccggaa
aatagtgatgaattaaaaaccgaacgtttctttcttccaatatatattaaaaacgcttta
ctgaactctccgcctcggtcatcatataaaagcatgtacatgatggatgtagaccagttt
gtactttctaccatcatacccggaattatctcagccgaggactacgaaacacctgaccac
tcactcgtgtataacatttccaaaccatccagaccaaatcaaggatattttgttcattta
gatgaccaaactactgaaattagttctttccttcaagatgatcttgaaaaccacctgata
gcatatcagccacctaacaccagcttttccgaaagaaaaatatacgaggtagaactcaaa
gtgtacgacagtcattttgcagagagtatgccaatagtcctacacattgcagttcgtccg
tcgtcttctaatgctccacgcgtgtcatgtaataccggcttagttcttctagaaggacag
tcaagagaaataaactctaataacttacagatagttgacaataataatccaaatgatata
cgggtatatatcactgacggtcttaaacacggccagctagttctgaacaatgaggccatt
actttcttcacaatctctgatctcgttcaggggaatgtcagatacgttcatgatgatagt
gaatcggaaagagatttcataaaattgaagataagcgatggtgcaaaacatactgtggta
aaattccctattacaataattccaaaagacgacagtccaccttatattgtaaacaatcta
ggtatagagttaaatgagggacaaacaaaacgtatagacccgtcaaatctccttgcacat
gaccctgactctatcgatatgacaataacgtacgttattgcacaaccaacagctgctggt
gaaatgatcagaaaaacacgggcgtctgattccggaacacgtgttaacaggttcacacaa
agggaattacagaagggacaaatttactacagacattttggacgtgaggattttcacgat
gaattcttattcacacttcgcgaccagcaagacccaccgaacgaatctatactcgaaaca
ttttacattgctattaatcctgttaacgagaacccaccacaactatcaccggaagctacc
cgcttaatgagagtttccgaaaccgatatcgccttaataactaaatctgaactcgaatac
acggataaagaaacagggtcagataggctaacgtatatcattacggtacctccgtatttt
gtgtacagtaatagaagaaatagacgagaggatgctggaagaattatagccttgcataat
ttgacaatgctcagcaagaacaaaaacatttctccggttgctactttcaaacaggaagat
attaactatctaaaaattggatatatgccgcctatgaaagacataggtccagaaccccgt
cttgtacgctttgtatatacagtacaagacgccagtggtaataaagtacttggacaacag
tttgatatcgatattcaaccagttaacgacaaagctcctgaattccagtcttcaaaaatg
cttgttgaagaaggtggaatacttggaatctcaaccaaccatatttttgcagttgacgtc
gacacaaacgaggcagacttaacattcatattggaagatctacctaaccacggacgtctt
caaaagggaggcaataacctattggaaaaagatacatttagcatgttagacctgcgaaaa
aaggatttaaggtatatccacgatggctctgaagttacgagtgacaccttcactctgtca
ttgacagatggtgcaaacagggtatccaaggtgttccaggtagaaatagtacctatagat
gatgtggctccaaagttgaaggagaacttgaagccgcacctgattgtgtctgaagggagt
gaagccgttattaactccaatgttctatctgccacggacgaggatacagatgaagggatg
cttgtgttccttattgtaaaacagccaaagtatggaataatgcaactaaatggtgaacca
gtgacaaaatttactcagcaagatgtcaaggaaggcagtgtccattacattcacagtagt
ggtgagattggatcccagataataagagattccgtcgcttttattgtctcagatcagcat
tacaaggcctctgcagatctaccaatgtacaatctgaatatcacaataacacctgttgat
aaccaaaaacctatcattatagcaggtatgcccattgttgtggaggagggcatgaagttc
aacttgtctccagattatatcacagccaaggatccagacaccgaacccgagtctatacag
tttgttatcacaagccaaccacaatacggttatctagaaaatatcaaacccaatcctgga
tcggagaaaagtaatgcaggaaacccagttttgacattcaaactacaagatgttatcgat
aaatcaataaattatgtacaagctacacacaaaggtgtagaacctactactgatcgtttt
gagttttatgcaaccgatggtaaattgaattcttttagccacactgcttctataacgatc
cgcccaactaatgacgaagaaccagatgttatgctaaatgatttcagtgtacctgagggc
ggtagtaaaattatagaccggtccatggttgatgcaatcgatatggataagccaaaagaa
aagataatgttgtcgatttcacaacctccagagcatggagatattgtcgtaatgcttcat
acgcctaatggggacatccaagccgcagttagtatgttctcagcagatgaacttcaccaa
ggaatgaaactgaagtacatacatgacgattcagaacattatacagataaatttgctata
actgtgtctgatggtaaacacgaagtcaagaaagtatgcaatgtaactgttgaaccaata
aatgacgaaatacccgaaattatcaaaaacgctggtcttcatatggattatggtgaacaa
tctgtattgtctagtgtggtacttcaatctgtagacatagacaatactgacgatcaggtg
tactacataatagtgacggttccaaagaaaggtgttcttcaattttgcagtgattcaaac
gaacccatgttttctgaaaaatgtcgagacatttgggtaggccataactttacacaacgg
gatatcaacaacaatcgtgtccgatatcttcatacgactggtatgagtggatcagaattc
gataactttatgttcattctaacggacggacaaaacaaacgccatgcggaaacgttccag
ataaaaatattgaattctaagagagcaaatattgctttaattaacaatggactggatgta
caagaaggtgaaagagctgtaatctcaacagttagtttaagtgcatcagatgaaagcaca
agggcagaagaaattgtatttgctgtgattagaccgccaaatttaggtcagcttgaatac
atagatagaaatttaattggaatcagtagctttacgcaaatggatttggcgtctggtaaa
ttagtatacaaccatttgacaaaaacagactttacagacgattccttcacatttactgta
actaatggaatgagtgacacaaaagattcagaatttcatattcgcattgaaccaatagat
aaagagttaccatcactcattaataatgaacttatcgaagtgttgcaaggtgctgagatt
cctataacatcgaacaaactcaaagctgatgatccggacactgacagtagcaatgtcaca
tacctaattgataaacaaccgacatttggaaggttatataaccgcggtgtatacattaca
agtctgtttactcagagtgcaattgacaggggatttattacttacgaaagcgacggctct
catacaggtctcgataatttcctctttacactgagtgatggcaaacatgacgggttctta
ataaacggcactcttcaactcaagcaagttttctgcagaatatacacgaagcctctggtc
aatgatgctccaaaattaattaccaaccaacatccagaagttttagaagtgtttgaagat
ggtagatatggatttcacctaaataataacgttttaaaggctgtagactcagatacaatg
aacacgaacttggtgtacgttatagagcagaggccaaaacatggtcatctggagaacagc
gaagcaaagcggtatgtcaggagaaggttcacccagcgcgatctggatgaaaacgcacta
cagtttattatagatatgaaagacaaagacacaaatgacagcttcacatttaagatagaa
gacagtcgtggcaatagcttaaacaatcaaagaattgattttcactggtcatttattgag
cttgacaaagctggcctcgtggtgtgtgaaaacattgggactcttccaattactttgaca
cgcatgggcgacctgagcggcgtggcatttgttggaatagaagcccaggacagaactacg
agaatgaacgatgactacaggcctagctcttccagacaggttcagttcgacccgggtgtg
tcatctgtaacgtggaatattcaagttttcgatgatggtatagaagagaacacagagaac
tttgttgtttatatcaatgatccagtcaatgctatactgggtagaaaacgtaaaataagg
ataaggcttattaatgctgatgatggagaatgtccacagtacataggaatgatcagtaag
caccagccatccattccagactcattatacttaccaggcaatgccatagaaagtaaaacg
gaaacagtaattctgggtaaccagttcaaacggctaacacagcaaaagtctcaccatgat
aacacacttctttctgaccctgctgaaactagtgaggtaggtgctaacaaaccgaaaaca
gctgataatgaagaaaaccctactaatgttcagaagaaagataaaaagaagagaagaaaa
aagagaaaagaaaggaaggccaggaaggacaggaagaaaaaatcaagaaaaggaagaaga
aagaacaagaatagggaggttgaggcagaaaaggatattgctgagccggcaactggaaat
cttgtatcaggacaactgatgcagaatgttgatataaatgcaccacaagaatgtacaagg
actactggaggtttattgtactttgatccgggcactcaacaaatgtacaaatgtaatgga
gatgcatggcaggcatggagcccggcttcaaaccaagatcaacaaccggaaaccagggaa
tgccagcaagggtggtcaaagtatggaaatcgctgttttaagtttatcaatgaacgactt
acgtgggaggtagctgagacactgtgtcagatgtcatacggtgccaatctagcaactgta
cagtcgcaagaccatcaagagtgggtctcaaaactggcgggaaagaaagcatattggata
gggttgagcagcaacgcagacactgggaggtggagttatagcaacggcgaagcactctcc
ttctctaattggaaaagtggtggtcagcgagtcaaacgaacgctgtcgaggaaaacttgt
gtaattgttgacaaaaagagaaaatggcgaaataaaatatgtagcaaacggaaagcaaga
tttgtatgtgaaattgacataggagcgggtgacttgagcaggtctccgccaaaacgagat
acatcgaggtcccgcgaaaggagaagaagaaagaatagattgagagaccgacaaaacgat
caaatacataccagttaccgagaaaaagattctcggaggtacccgaagactcacagtaaa
gaaagaggatttttctttggcgaatag
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