Mercenaria mercenaria (northern quahog): 123525146
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Entry
123525146 CDS
T07835
Name
(RefSeq) patched domain-containing protein 3-like isoform X1
KO
K24682
patched domain-containing protein
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mmer04990
]
123525146
Domain-containing proteins not elsewhere classified [BR:
mmer04990
]
Other domain-containing proteins
Patched domain-containing proteins
123525146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
123525146
NCBI-ProteinID:
XP_045159868
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All DBs
Position
3:complement(33338910..33371565)
Genome browser
AA seq
1006 aa
AA seq
DB search
MSTNKALLNGGMDVKRENGGPNHFSAHGTTVHEKNDDKGCCGCTCLQKISNSIVGGLEKS
FYRLGKLVARNPWKTIFACMLVCGIAGVGLMRWHEETEYVKVWLPRGSRMYEEDLWVKEN
FPERIRYEAVIVEDENVLSPQTLNAMYDIFKTAQNFKSDDDATLDNLCIKAGPICRVNSI
LELWGYNESVIRSLTEESIYGTVNQDVIQSPLYRNVMDLDKILGGVQRDNESRITGARAT
TFFWFLKRNESSRAAAESWEKQLINLINDVGHKHIDKLYIYTARTFDDVISGAASHDVGL
LTIGFAFVYLFLTFSIGNYSLLEHKIFLAMSGLLSIGMAIIFTYGVGLGTGIMFGPIHQI
TPFMLLGIGVDDMFVIVESLRQLTPKERQLPVQERIGLTLKHAGVSITVTSVTDIVAFGI
GGSTVIPSLSTFCLYAAIGVLALYILQATFFVACVTLDEKRIDSKRNACIMCYKHDDNYK
PGKYYSFSLQYAFMRNIWGPLLTKIPVKVIVILAAFAMTGVNIWSFIRIKHDFDPSMYLP
KDSYSQKYVEADRNYFPNDGAFVQMYCGKLDYNQNFDRLFELYHLIKDKPSVQSTTVDFW
LASFVKWQNETSNVAISHAMTNLSQDISVVPYQQDWLSQLMQFLMTKDGRVYLRNIKFDN
VTSPTKITGSVLTFRHVKCTTSICNIKAMDDMRDLVDGYSLPGGGTCFVYSNPQYMFNET
NKVLKLELYRNLALAAVCVFVVTLILIANFWTSLLVFFCVVCTVIDVAGTMQFWDISVDT
ASSVLLILCFGLAVDYSAHIGHSFMTHTGNKNERTRKTLVSMGPAVFSGGFSTFLAFLLL
VNSISYGFTLFFRIFTSVVIFGLFHGLVFLPVILSLIGPEPYNTNFLSETDKLEAKYLEA
ADIAINVHNSDMGDIQMTELHPLKKTANGSIKDDSLFWKEFDSALPGNNYDQCNSLPNSQ
GVLDIAVNNEHNPRYSGSYYEQMSNGSLVQIPFPEPHVPYTKTDNV
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgaacaaagctttattaaacggaggaatggacgtaaaacgagagaacggagga
ccaaatcatttttccgcacacggaactacagtgcacgagaaaaatgatgacaaaggatgt
tgtggttgcacgtgcttacagaaaataagcaattccattgttggtggattagaaaaatcg
ttttacagacttgggaaattggttgcaaggaatccatggaagacaattttcgcatgcatg
ttggtgtgtggtattgctggggttgggctgatgagatggcacgaagagacagaatatgtc
aaggtatggttgccacgtggatcaagaatgtatgaagaagatttatgggtgaaagagaat
tttccagaaagaatacggtatgaggctgttatagtggaagatgaaaatgtcctgagtcct
cagaccctgaacgctatgtatgatatatttaaaacagctcaaaattttaaaagtgatgat
gacgcaactttggataatctttgtataaaggcaggtcctatatgcagagtaaacagtatt
ttagaattatggggctacaacgaatcagtaataagaagtctgacagaggaatctatatac
ggaacagtgaaccaagatgttatacaaagccctctgtatcgtaatgtaatggacctggac
aaaattctgggcggggttcaacgcgacaacgaaagtagaattacaggtgctcgtgcaacc
acgttcttctggtttctcaaacgaaatgaatcttcaagggctgcagctgaatcctgggag
aagcagctaataaatcttattaatgatgtcggccataaacatatagacaaactttatata
tatacagctagaacttttgatgatgttatttctggagcagcatcacatgatgtgggacta
ctaactataggctttgcctttgtttatttgtttttaacatttagcatcggcaattatagc
ctcctagagcataagatatttctagcaatgtccgggttgttaagtatagggatggccatt
atattcacgtacggtgttggtttgggaaccggaatcatgttcggtccaatccatcaaata
acacctttcatgctgctagggattggtgtagatgacatgtttgtgattgtcgaatctttg
cgacaactcacgccgaaagaaagacaattgccagtacaagaaaggattggactgacgcta
aaacacgctggagtttctattaccgttacttcagtcacagacatagtggcctttggaatc
ggcggatctacggtgattccatcactaagcacattctgtctttatgcagctataggcgtt
ttagctttatacatattgcaagctacgttctttgtggcatgtgtaacgttagatgagaaa
cgaatagattcaaagaggaatgcctgtattatgtgttacaaacatgacgacaattacaaa
cctggaaaatattacagcttcagcctacagtatgcatttatgagaaacatttggggtcca
cttcttacaaagattccagtgaaggtgattgtcatattggccgcgtttgccatgactggt
gtaaatatttggagttttatcagaataaaacacgactttgatcctagcatgtacctgcca
aaagattcctactcccagaaatatgtagaggcagacagaaattacttcccgaacgatgga
gcatttgtgcagatgtattgtggaaaattagattacaatcagaatttcgaccgattgttt
gaactgtaccatctcatcaaggacaaaccatcggtccagtcaacaacagtagatttctgg
ttggccagttttgtgaaatggcaaaatgaaacttctaatgtcgcaatttctcacgcaatg
acaaacttgtcacaagatatatcagttgtaccttaccagcaggattggttaagccagttg
atgcaattcctgatgacaaaggatggaagagtttatttgagaaatataaagtttgataat
gttactagtcctacaaaaataacgggctctgttttaacattccgtcacgtgaagtgtacc
acatctatctgcaatatcaaagccatggatgatatgagagacctcgtggatggctacagc
cttcctggtgggggcacctgttttgtctactcaaatccgcagtacatgttcaacgaaact
aataaggtattgaagctagagttgtaccggaacctcgccctagccgcagtttgtgtattt
gttgtgaccttgattctaatcgccaacttctggaccagtcttcttgtgttcttttgtgtc
gtctgcacagttattgatgtcgctggcaccatgcaattctgggatatttctgttgataca
gcatccagtgttctgctgatcctttgctttggacttgctgtcgactactcagctcatatt
ggacactcgtttatgactcatactggaaataagaatgagcgaactcggaagacattggta
agtatgggaccagctgtgtttagtggaggatttagtacgttccttgccttcttacttcta
gtcaacagtatcagctatggtttcacacttttctttaggatatttacatcggttgtgata
tttggtctgtttcatggattagttttccttcctgtgatactcagtttgataggccctgag
ccatataatacaaacttcttgtcagaaacagacaaattagaagccaaatatttagaagca
gctgacatagcaataaatgtacacaatagtgatatgggtgatatacaaatgacagaactg
catccattaaagaaaacagcaaatggcagtataaaagacgatagtttattctggaaggag
tttgatagcgctcttccgggaaacaactatgaccagtgcaatagtttacctaacagtcaa
ggggtattagacattgcggttaacaacgaacataacccgaggtactcggggtcgtattat
gaacaaatgtccaatggctcactggtgcagattccatttcccgagccccatgtaccatac
acgaagactgacaatgtataa
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