Mercenaria mercenaria (northern quahog): 123525171
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Entry
123525171 CDS
T07835
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1-like isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123525171
Membrane trafficking [BR:
mmer04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
123525171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
123525171
NCBI-ProteinID:
XP_045159941
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All DBs
Position
3:complement(31257316..31384238)
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AA seq
1419 aa
AA seq
DB search
MYFPVGWPKYIKQPYSDLREPCHIISSCDRMLFAIVSEEEISIWYCKPAVQIVSYTQSEK
NLEKYGRYCRAEWKPDSAALAVITSNSYIVLFKVDLDISVPNHHCLYVTAESSTRAHNYL
EGNGFVDGNSVPAIKLTRQKHVKLTANITCCLSIREELAVATEDSFLTRIHWSGTENTKA
SVCLKDLSVAADMLQSRGNKLTLDDGHVIQMEYSPIIGGYCLVLSSGKAMLMMSLSARGN
DSNSSGVWATNMNDAECQAVNHRYRLIAYGCAGAYGVIYTINEVEGLLEASHRLQVSCKN
FPTLSKTVGAVTCLRWTPDGTALAMAWKKGGFALWSVFGSLLACTVGGDYRCDKQISECN
DCSFTKDYLRLFPPSVKAMEWGLEGYQLWMIGSQCSEGDENGQYATVDHTDIFQLQFAKS
SLTVNPCMTNHEHVFLQGEDKLYLNTGDITSKSSQYGGCESHILVGSKQWQIIPISHSYL
ASNWPIRYSCVDKAGQCVAVAGKTGLAHYALFNRKWKLFGNETQERDMVVSGGITWWKDF
ICVACYNIIGHRDEIRCYPRESKLDNTFANIQKVPSQVLLINIFKDTLLVFCVDSHVMIF
NLERNNTQSNPTVDISKIQEVGLSNYIPHPVCVTGIVFTSLKIDVAPLVASQRPVQSAKE
TESLLLNVAGKLLVFQRDRSGPQIKQKEKSSPQKAKPLPFSSPSVVATNVENLWTTSRSV
TGKLQLTEALWLSCGCQGMKVWLPILPKNESQAHNFMSKRIMLPFRVDIYPLAVLFEEAV
ILGVASDASMFRYNSTSSFCHPSRNLHDLPYCSIERTSQVYLHHILKQLLKRNLGVQALD
LARCCTELSYFSHVLELLLHEVLEAEATSKEPIPDPLLPRVVAFIQEFPEYLQTFVQCAR
KTEVALWPHLFTTVGNPKDLFEECLINGRLETAASYLIILQNLEKPIASRQHATLLLDSA
IEDRQWELAQDLVRFLKAIDPNDADASPPLVFNQGKVQPGSYIGSPAMSREECDFTFSSV
SNVSRIRSSSVTAESAVREVSKEKVKLTHTKSDNQMISKRPSPRPVQTNSTADQVYIDSI
LFRHARKLLSSNRLKDLGYFAANIKDFHMVAWLKKERLRSGKVEDFVSALRDIHHQFEWP
LPVLSLSAFQQLKSKAFSSSSLASLSLLDEDVPNASYPGQNATLVPQSADTDSRGRPLPK
NISFVSTEVSDDVVLKPQLSRADEGSLATLEISDTSSLFGDFDFLADSSSSLDSLSPELE
LLSQEIISKGPGQSELELRYLFQVLLEGGCLEWALIISIVLRDSSSVIRTINTASMTDTP
LEIVARMREGLSYLELWSDTECVGYKPFLHAIRSQIQVLTKIAEQAPPTLKLNADVDCVP
ATVEEGNLSPGTMSIHEGQGQADSPPIQEPQKQHECAIS
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgtattttcccgttggttggccaaaatatataaagcagccctacagcgatttgagggag
ccatgtcatataatttcaagctgtgaccgcatgctttttgccattgtctctgaagaagaa
ataagcatttggtattgcaagcctgctgtccagatagtcagttacacacagtcagagaag
aatttagaaaaatatggaagatactgcagagcggaatggaaaccagattctgctgctctt
gctgttattacaagcaactcttacattgtgttgttcaaagttgaccttgacatctctgta
ccaaatcatcactgtctctatgtaactgcagaaagcagcacaagagcccataattatctg
gaagggaatggatttgtggatggtaacagtgttcctgctataaaactgacccgacagaaa
catgtgaaactgactgcaaatataacatgctgtctgagtatacgagaggagctggctgtg
gccacggaggacagtttccttacacgtattcactggagcggaacagagaacacgaaagct
tcagtatgtctcaaagatctttcagtagcggcagacatgttacagtccagaggaaacaaa
ttaaccctggacgatggtcatgtgatacagatggaatacagtcctatcattggaggatac
tgcctggtgctgtcctctgggaaggccatgttgatgatgtcactctctgcaagaggcaat
gacagtaactcctcaggtgtttgggccactaacatgaatgatgctgaatgtcaggctgtg
aatcatagatataggctgatagcctatggttgtgctggtgcttatggtgtaatatataca
ataaatgaagttgaagggctactggaagcctcacacagactacaggtctcatgtaaaaat
ttcccaacattgagtaaaacggttggtgctgtgacatgtttgcgatggactccagatggt
acagcattagctatggcatggaagaagggaggctttgctctatggagtgtgttcggatct
ctgcttgcctgtactgtgggcggtgactacagatgtgataaacagatatcagaatgtaat
gactgtagttttaccaaagattatctacgattatttccgccatctgtcaaagcaatggag
tggggcctagaagggtaccagctgtggatgattggttcccagtgtagcgagggagatgag
aatgggcagtatgctacagtggatcacacagacatatttcagttacaatttgccaaaagt
tctctcactgtcaatccttgcatgacaaatcatgaacatgtgttcctgcaaggagaagac
aaattgtatttaaacacgggtgacatcacatcaaagtctagtcagtatggaggttgtgag
tcacatatacttgtgggcagcaaacaatggcagattattcctatctctcacagttacttg
gccagtaattggccaattaggtattcgtgtgtagacaaggcaggccaatgtgttgctgta
gctggtaaaacagggttagctcattatgcactttttaacaggaagtggaaactttttgga
aacgaaactcaggaaagggatatggttgtatcaggagggatcacatggtggaaggatttt
atttgtgtggcatgctataacattataggtcacagagatgagatacgctgttacccaagg
gagagtaaattagacaatacatttgctaatatacagaaagtgccctcccaagttctgttg
ataaacatattcaaggacactcttttagtgttttgtgtggactctcatgttatgatattc
aatctagagaggaataatactcagtcaaatcctacagtggatatatcaaaaatacaagaa
gttggcctcagtaattatataccccacccagtctgtgtaaccggaattgttttcacttct
ctcaaaatagatgttgcacctcttgtagctagtcagcgaccagtacaatcagccaaagag
acagaaagtctgttactgaatgtggcaggaaaacttcttgtgttccagagagatcgcagt
ggtccacagatcaaacagaaagaaaaatcatctccacagaaagctaaaccattgccattc
tcctcaccttcagtagttgctacaaatgtagagaatctatggaccacatcacgctcagtg
acgggtaaacttcagcttacagaagccttgtggctcagctgtggatgtcagggtatgaag
gtttggttacctattctcccaaagaacgaaagtcaggcacataatttcatgtcaaaacgt
ataatgctgccgttcagggtggatatataccctttagctgtgttatttgaagaagctgtg
atactaggtgtagcaagtgatgcttcaatgttccgttataattctacatcatcattttgt
catcccagtcgaaatctgcatgatcttccatattgctctatagagagaactagtcaagtt
tatcttcatcacatacttaaacagctcttaaaaagaaacctaggtgtccaggcgctagat
ttagcgaggtgctgtacggagctgtcatacttttcacatgtattagaactgttgcttcac
gaggtactcgaggctgaagctacatcaaaagaacctataccagatccattgttaccgcgt
gttgtagcatttattcaagagttcccagaatacctgcagacatttgttcagtgtgcaagg
aaaactgaggttgctctctggccacatttgttcactacagtcggaaacccaaaagatctg
tttgaggagtgccttataaatgggaggttagagactgcagcatcatatctcattatactt
cagaatctggagaaacctattgctagtagacagcatgcaacattactgttagactctgct
atagaagacagacagtgggaactagctcaggatctagtcagattcctcaaggctatagat
cctaatgatgctgatgcgtctccgcctctagtgttcaaccaggggaaagtacagccaggg
tcctatattggaagtccggcaatgtcccgggaggagtgtgacttcaccttcagtagtgtc
agtaacgtaagccggattcggagctccagtgtcacagcagagtcagctgtgagggaggta
tcaaaggagaaggtcaaacttacacataccaagtctgataatcagatgatctcaaaaaga
ccatcaccccgccccgttcagaccaactccactgccgatcaggtttacatagactcaata
ctgttcagacatgcaagaaaattgctctcctccaacagactcaaagatctcggatatttt
gcagcaaatatcaaggatttccacatggtagcatggctgaaaaaagaaaggttacgttcc
ggtaaagttgaagattttgtgagtgctttgagagatattcaccatcagtttgaatggcca
ctacctgtattgtcactttcagcatttcaacaactcaaaagtaaagcattttccagctct
agtcttgcatcactatccttactagatgaggatgttccgaatgccagttaccctggacag
aatgctacacttgtaccccagtcagctgacacagacagtagagggagaccactccctaag
aacatcagttttgtatcaacagaagtgtcggatgatgtggttcttaaaccacagttgtca
agagcagatgaaggtagtttagccactctggagatctctgacaccagctctttattcgga
gactttgatttcctggcagactccagtagtagtttagacagcctgtctccagaactggaa
cttctgtcacaggagattatatctaagggaccaggacagtcagaacttgaactcaggtat
ttgtttcaagtgttgttggaaggaggatgcctggaatgggcgttgattatatctatagtt
ctacgagattcctcatctgtgatacgcacaatcaatacagctagtatgactgacacgccc
cttgagattgttgctagaatgagagaggggctatcttatcttgaactgtggtcagatact
gaatgtgtcggatacaagcctttcttacatgcaatacgaagtcaaattcaagttcttaca
aagattgcagaacaggccccacccacacttaaactgaacgcagatgtagactgtgtccca
gctacagttgaggaagggaacctgtcccctggtaccatgtcaatacatgaaggtcaaggt
caggcagactcgccacccatacaggaaccacaaaaacaacatgaatgtgctatatcttga
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