Mercenaria mercenaria (northern quahog): 123525216
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Entry
123525216 CDS
T07835
Name
(RefSeq) DNA-binding protein RFX2-like isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123525216
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Other basic domains
RF-X
123525216
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
ThermoDBP-RP_arch
Motif
Other DBs
NCBI-GeneID:
123525216
NCBI-ProteinID:
XP_045160021
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Position
3:27506856..27572132
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AA seq
848 aa
AA seq
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MDTMFDSDEEIDDIDLMATPTFVTDLQAMNPTVVQVHQVNQNSKSPVSSQSNQGQKTATI
IQPAQAHTGQQQFIVTTSVAEALTEQNQSNQENIAIHQGGQALYPAHVQYVEGNDPSIYA
STNGQMVRWNNEGQQYSGDYGQTTVYNTSSGTYYQTSSGQVATGLPNMGAAIQTMQGHIL
TQQGGNTYLIQGSTMDGEGTPLTHTTRASPATDELYNRSQEQSALARYASSFEGKGSSVN
LDVPSLKSGVQWLIDNYETADGVSLPRSTLYNHYLRHCQEQNLDPMNPASFGKLIRSVFL
GLRTRRLGTRGNSKYHYYGIRIKANSPLNQFTDDQTMAMRQQPLYQGKKFRPKSEGGEGG
YGGSESQPQHEGPTTQQQQHQQFLGDASGAIPNFGEIDVSSQPLPDGITMDHVLIFQKMY
REHAEAIVDVVVNLQFSLIEALWQGFWRNQSLDHSPDNDYERRLPRDKLYTMCRYEPVMN
YVRKSDYMFYQALVEVLIPDVLRPIPSSLTQAIRNFAKSLENWLKGAMTNVPDEMMKTKL
GAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLTDLNRVDFANVQEQASWVCQCDD
SMVQQLEQDFKKTLQAQNSLEQWAIWLEGVVNQVLKQHEGNPNFPKAARQFLLKWSFYSS
MVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHKVASATGETPIAVMGEFVDLSSAVAM
SFSEAEIEKSTATINKSSSNIVTKPTLIQAPLNKTTGAATSLINRTTAENLGATSGATTL
MVLTTSSAGTANHNGSVGMVSSGNTGTLAVKTATTTGAMGGAKTIVVMPVSNNFAAGDGA
TAKRFKIE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggatacaatgtttgactccgacgaagaaatagatgacattgacttaatggccacaccg
acttttgtcactgacctacaagcaatgaatcccacagttgtacaagttcatcaggtgaac
cagaattcgaagtcgccagtttcatcccaatccaatcagggccaaaagactgcgaccatc
attcagcctgctcaggcgcacacaggccagcagcagtttattgttacaacatcggtagca
gaagccttaacagaacagaaccagagtaaccaggagaatatagccattcaccagggaggg
caggcactttacccagcacatgttcagtatgtagaaggcaatgatccaagtatctacgca
tctacaaacggtcaaatggtccgctggaataatgaaggacaacagtacagtggtgactat
gggcagacaacagtctataacacctcttctggcacatactatcagactagtagtggacag
gtagcgactggacttccaaacatgggagcagcaatacagacaatgcaagggcacatactg
actcaacagggaggtaacacatacctgatacaaggtagcaccatggatggcgagggaaca
ccactaacacatacaacaagagcttccccagctacggacgagttgtacaatcgaagccaa
gaacagtcggctctggcacgttatgccagcagtttcgagggtaaaggtagctctgtaaac
cttgatgttccatctctcaagagtggggttcaatggttgatagataactatgagactgcg
gatggtgtgagtcttccacgtagtacattatataatcattatctgcggcactgtcaggaa
cagaacttagaccccatgaatccagcatcatttggtaaactcatacgctcggtgttccta
ggactgcgcactagaagacttggaacacgtggaaattccaagtaccattattatggtatt
agaatcaaagcaaactctcccctcaaccagttcactgacgaccagacaatggccatgaga
cagcaaccactttatcagggcaaaaaatttcgcccaaagtctgagggtggagaaggtgga
tatggagggtcagaaagtcagccccagcatgaagggcccacaacacagcaacaacaacat
caacagtttctaggtgatgcttctggggcaataccaaactttggtgagatagatgtatcc
tcacagcccctgcctgacggaatcacaatggatcatgtactcatttttcagaaaatgtat
cgagagcatgcagaggctattgttgatgttgttgtaaatctccagttttccttgatagaa
gcactttggcagggattctggagaaaccagtcattagatcatagtcctgataatgattat
gagagacgattacccagggataaattgtatacaatgtgtagatatgagccagtgatgaac
tatgttcggaaatctgattatatgttttatcaagcccttgttgaagttcttatacctgat
gtacttagacctattccaagttctttgactcaagccatcaggaactttgccaaaagtctt
gagaactggcttaaaggagccatgaccaatgtgcctgatgaaatgatgaaaaccaagttg
ggagcagtgagtgcctttgcccagacactacgtagatacacgtcccttaatcatcttgct
caagctgcaagggcagtattacagaatacctcacagatcaatcagatgctgactgacctt
aacagagtcgacttcgctaatgttcaggagcaagcaagttgggtgtgtcagtgtgatgac
agtatggtacagcaactggaacaggacttcaagaagacccttcaagctcagaactcccta
gaacaatgggctatctggcttgaaggagttgttaatcaggtcttgaaacaacatgaagga
aatccaaactttccaaaagcagctagacagtttctccttaagtggtctttctacagctca
atggtgatccgagatcttactctacgaagtgctgcaagttttggatcatttcacctcatt
cgcttgttgtatgatgagtacatgttttatcttgttgaacacaaagttgcttcggcgaca
ggagaaacacccatagctgtcatgggtgagtttgtggatctcagcagtgctgtagccatg
agcttctctgaggcagagatagagaaatctacagcaacaataaacaaatcgtccagcaac
atagtcaccaaacccaccctcatccaagcacctttaaacaaaactactggggctgcaaca
tccttaatcaacagaacaacagcagaaaatctaggtgcaacatcaggggcaacaactctg
atggtcctaacaactagttctgcagggacagcaaatcacaatggctctgtgggtatggtg
tcatcaggcaacacaggaactcttgcagtaaaaacagcaaccacaacaggggcaatgggt
ggtgcaaagacaatagttgtgatgcctgtctcaaataattttgctgctggtgatggagca
acagcaaaacgctttaaaatagaatag
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