Mercenaria mercenaria (northern quahog): 123525239
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Entry
123525239 CDS
T07835
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24-like
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmer01002
]
123525239
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123525239
Enzymes [BR:
mmer01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123525239
Peptidases and inhibitors [BR:
mmer01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123525239
Ubiquitin system [BR:
mmer04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123525239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
Motif
Other DBs
NCBI-GeneID:
123525239
NCBI-ProteinID:
XP_053394005
LinkDB
All DBs
Position
3:25007419..25097783
Genome browser
AA seq
2610 aa
AA seq
DB search
MEVDEDHVQTLLSMGFPSELDVRKALRLAKNSLNDAVAILTNDHPTQSFDTLDDIEMKDI
AKGSTVPVYGPNLPPSYEDVETEKQLTEAMDDTTAGEGAQEESNPYEFPVTNLYELEGRV
FAEHWSIPYKKEESLGKCLVAAANLAEAGLMDNDENCSRFVNRVMTDSFQKLMNSNAVHR
WNTEIQEGIYNMLQLLIDLVAARLQHQPVHLHLMDLLAMAFNPETEFHYKNKSRRDRTAW
EEKFEGGVPYSKVENSNFKDPHGWLTFLINRFAMKGGFDHIKKILETEELDAPSIAALLR
SLGVCAEFLDKEIMKSLLTNGMELSIKYVQNLAEKDFKEKKVGSVSDLLASMKLLCMNIW
PNDVEALDELRLDIALRMLKSPHFNAKMNSLKEVTKLIEDSTSTKNPRQKTAIPANKIQD
WLVENKVLSIALEGNIDQAQYCDKIKGIVDFLGTDLSSDELTMIWKMQLSQTNNVIDNIH
SIIAAAAVKFDPNQLEHLLLLIQKKWQEENDKSREKLLSLIGKIGRDAKIPKTTNQVLQL
LWDLSHLPALSTHLIELALEEHLAILNDSYIVKDQVKRNYVSKCVEDIKKGVCVLPTLKQ
LHQLSKNILKHSFKQDKGILHELNKNFDIIKLVTQSLVKCHKQAVNSVGEGQLDQNTLVD
SRYPHSDYVTSHLSFLQYVLQEGVLYLPWNRAREIWSALVASGEACTWDRETCYEWFSKG
LMDLDNETQTKLFQNELLKLDPAKISEKGFGCFKTYFENVNKNDHRLKESGGSLVVEKTE
LMGLDFLWELCLNTPDETIADSAIQLLLNMSYTNLASRLKKDPVNLHKKFINECQTRLEM
AMIGASGTAISQAVLSATKTLTAVVVPEVANISVPSKSIKLLNIERLLWIAEMYVLNVEE
THVSPRTILPHGASFQGHQINLFITCDAPKQEFMLVCHSNETLGNVKVKIANRLRQSTEN
IQVVAQEKFVSSVLGSNKDQKLLHQLDFEDNQTIQVRMVTPSSTASTSQSKEAPGTPMSK
QTFDLEQEKMLPGVIMAAGGQVFDMLYQLSELEETKITTRVRKLLMLIPTDPAVIDALDS
VSTRLPTLGSSDDLSPRSSPRKSTAAPSPKQTPQETLKTLFDCSSQDMSAFRVLYNLEVL
SSKLMPTSQDMGSKVSSQAFFEDFLVAGGLSTVVNVLQPESLHQDINYVTRQGCYSVCLQ
LARYLLCGQTVTGDLAFTPAKDDTKLTSTGSAGATVVPATPPVGTPVITLSPLTVDTRTA
GSHAVQTMGVHDFTETVSCFMRVAWAAAAGKLHLLSSPQPIRESATAYSCGRRSRQSSTG
SQGSTGSESDCQSLHGGVCVKQNFISTKDCNIAKEALEILVTCLQLRSELIAAFYTLPCV
SDFIIDILVGCSQSDIRSAAADQFYQLSQSEVTHLESSSNPQTPHHFLLQVLLKAYLPFW
VSSSSTRGASQRLLSQCSQYFDLRCKLLENLSTVDQKQYQVDISGMLEDEVAWLSNFVPT
EHPDLKETDNLLLAGHLKLIKTLFTCEEICKEEYGKSLVHDLLHDFLFPASKTMMDSMNG
GTNDLLLSEFNPKCNKTESRIAAYELITELANESLSNLKDVCSQLIEMHHQPNIDCANEW
EYLPPVDGRAGCGYVGLRNGGATCYMNSVIQQLYMVPGIPDAVLSTDDEDIDEDSVYYQI
QQVFGNLMDSRLQYHEPEKFWKVFKLWGDPVNIREQQDAFDFFQALIDQIDEQLKKTGKE
EIFKKKFQGIFTDQKICKDCPHRYEREETFTALNLTVKNATLQDSLDQFVKGELLEGDNA
YYCEKCGEKRNTIKRMHIKSLPPTLCIHLKRFGYDWEANRALKFDDYFKFPWILDMEPYT
AEGMARRDAESNKETEEPEQQVMDSRSGETPPMEISISVTPENKQINYELVGVVVHSGQA
NAGHYYSFIKERRGTVLNNNNKGKWFKFNDTIVEEFEMSDAAVEAECFGGTYKAKVYEQS
NSYPEDRLRYWNGYMLFYERMEESMTPLSAKKSKIVTRKLWPDGVPQCSSKRDSFVELTE
LVHKGERKGIFMDKMPASIQRFIHSENLTFIKNRDVYNEEYFRFVKNLVAENSNHTKHAD
YSDMCMVALRLAVKFLFNTYFRTKKKTRAELDEWIDVIEVVLSRCKEACFWMVEYMASEE
GASYIRPFLLESPNTDVRLSFAKILERMLCSFLSEHGGLPTHKCLDEILVHLLQMLNKDV
IDHCKHSVQYFLVLKCYVQMGTKACIHMFKLNGFKSLATFLLGNHSLSSSSSSSMDQESP
SRRWSSIQSREFGHLHTILATLILNCDVKAFWTIEPENAKVKKPLTVTPQTFLKMSADME
RYTYGQESMRYLREVVSAIREVGMPLKSVEDMLLYCSFCNETFSTTLLKQLMMQYMNAPS
NELKPVFSILTDLLLLEDPLQLKRLQLVIDGHVDDHGQQFEGLLAVIRLNHVQDSRRSYW
CIKFLVNLVNKCPLVKDDLQQTKSKWQWAVNWLKKKMTEYSYWSSSSTAASNEDSNRKSF
QRTISAQDTLAEATALLTELENYADMDTNGNSVASPTESDTMASGDVSPRNQPTDNQSDS
HMSTGNQSDTHMSIMEEDKGDKSGKDTDNS
NT seq
7833 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggacgaggatcatgtccaaacgctgttaagcatggggtttcccagtgaactt
gatgtgaggaaagccttgcgcctagctaaaaacagcctcaatgatgcagttgcaatttta
acaaacgatcatccgacacaaagttttgatactttagatgatattgaaatgaaagatata
gccaagggttcaacagtcccagtatatggcccaaacttaccaccctcctatgaggatgtt
gaaactgagaaacagcttactgaagcaatggatgacacaactgcaggagaaggagcacag
gaagaaagtaacccatatgaatttcctgtgactaatttatacgagcttgagggtcgagtc
ttcgctgaacattggtctataccgtacaagaaagaagaatctttaggaaaatgcctggtt
gctgcagcaaacttagcagaagcaggtttgatggacaatgatgagaattgttctagattt
gtaaatagagtgatgacagattccttccagaagttgatgaattctaatgcggtacatcgt
tggaacacagagatacaggagggtatctacaatatgttgcagttattgatagaccttgta
gcggccagacttcagcatcaacctgttcatttacatctcatggatcttctagcaatggcc
ttcaacccagagacggagtttcattacaagaacaaaagtcgacgagatcgcactgcctgg
gaggagaagtttgagggtggggtaccatattctaaagttgagaatagcaatttcaaagac
ccacatggatggctgacctttcttataaacaggtttgcaatgaagggagggtttgatcat
attaagaagattttggagacggaggaacttgatgctccttctatagcagcattactcaga
tctctaggtgtgtgtgcagagttcctggataaggagataatgaaatcactactgacaaat
ggaatggaattgtcgatcaaatatgtgcaaaatcttgctgaaaaagacttcaaagagaag
aaagtgggcagtgtatctgatctgctggcatctatgaagttgttgtgtatgaatatatgg
ccaaatgatgtagaggccttggatgaattacgactagatattgcattacgtatgctgaag
tctccacacttcaatgctaaaatgaattccctgaaagaggtgacaaagctgattgaagat
tccacaagtacaaagaatcctcgtcagaaaactgccattccagccaataagatacaggac
tggttagtggaaaataaagtactgtccatagcattggaagggaacatagatcaagctcaa
tactgtgataagattaaaggtattgtagattttctgggaacagatctctcttcagatgaa
ctcacaatgatctggaaaatgcagttatctcagacaaacaatgtgatagacaacatccat
tctatcattgctgctgctgctgtgaagtttgatccaaaccaactagaacatctccttctc
cttatacagaaaaaatggcaagaagagaatgacaaatcacgagagaaacttctcagtctc
attggcaaaataggcagagatgcaaaaatacccaaaactacaaatcaggttttacagcta
ctatgggacttgtcccatctacctgcattgtctacacatctgatagagctggctctagag
gaacatttagcaatacttaatgactcatacattgtcaaagatcaggtgaagagaaactat
gtctccaaatgtgtggaagatattaaaaagggtgtttgtgttctaccaacattgaaacaa
cttcatcagctgagcaaaaacattctcaaacacagctttaaacaagacaagggtatattg
catgaactaaacaagaactttgacatcattaaacttgtgacacagagccttgtaaagtgt
cataaacaagcagtgaacagtgtaggagaaggtcagctagatcagaacacactggtggac
agtagatacccgcactcagactatgtgacatcacatttgtcatttctgcaatatgttttg
caagagggtgtactgtatttgccgtggaatcgtgcaagagaaatctggtctgctctcgtt
gcatctggagaggcttgtacctgggatagagagacatgttatgaatggttcagcaaaggt
ttgatggacctggataatgagacacagaccaaactcttccagaatgaactccttaaacta
gacccagccaagatcagtgagaaagggtttggctgttttaaaacatattttgagaatgtg
aacaagaatgatcacagactaaaggagtcagggggatctttggttgttgagaagacagaa
ttaatgggtctagattttctctgggaactttgcctcaatactccagatgaaacaatagca
gatagtgcaatacaacttctcctcaacatgtcctatacaaacctagcatcaagactgaaa
aaggaccctgtgaatttacataagaagttcatcaatgaatgtcagacaagattggagatg
gcgatgataggtgcaagtggtacagctatatcacaggcagttctcagtgccaccaaaaca
ctgacagcagtggttgttcctgaagtggcaaatatatctgtcccttcaaaatcaataaag
ttgttgaacattgagagattactgtggattgcagagatgtatgtactgaacgtcgaggag
acccatgtgagccccagaacaattctccctcatggtgcctcatttcaaggacatcagatc
aacctttttataacctgtgatgcaccaaaacaagagttcatgcttgtttgtcacagcaat
gaaacgctgggaaatgttaaagtgaagatagccaatcgtttacgacagagtacagaaaac
atacaagttgttgctcaagaaaagtttgtcagcagtgtgctgggtagtaacaaagatcag
aagttattacatcagttagactttgaagacaatcagacgatccaagtacgaatggtcaca
ccctccagtactgcaagtacttcacagtcaaaagaggcaccagggactccaatgtcaaag
cagacatttgaccttgagcaagagaagatgttgccaggggtaattatggcggctggaggt
caagtgtttgacatgttgtatcaactctcagaacttgaagagacaaagataacaacgcgt
gtaaggaagttgttaatgctgatacccacagaccccgcagtcatagatgccctagattct
gtttcaacaaggctaccaacacttggatcatcagatgatctcagtccaagatcgagcccc
aggaagtcaacagcagcacccagtcccaaacagacacctcaggaaacacttaaaactctt
tttgactgttccagtcaagatatgtcagctttcagagtattgtataacttggaggtttta
agtagcaagttaatgccaacatctcaggacatgggttccaaagtgagttcacaagcattt
tttgaagactttcttgtagctggaggtctgtctactgtagtgaatgtgctacagcctgag
tcactccaccaggacatcaactatgtcacaagacaggggtgttactctgtttgtctgcag
cttgcaagatacctgctgtgtggtcaaactgtgacaggagatcttgccttcaccccagcc
aaagatgacacaaagttaaccagtacagggtcagcaggggccacagtggtgccggccacc
ccacctgtagggaccccggtgattacattatcccctctgactgttgatacccgtactgca
ggcagtcatgctgttcaaacaatgggtgttcatgactttactgagacagtttcctgtttt
atgagagttgcttgggcagctgcagcaggcaagctccaccttctcagttcccctcagcca
atcagagaaagtgccactgcctatagttgtgggaggcggagcagacaaagtagtacagga
tctcagggtagtacaggcagtgagagtgattgtcagagtttacatggaggagtgtgtgtc
aaacagaactttatttctaccaaagattgcaacattgccaaagaggccttagaaattctt
gtaacatgtcttcaacttcgcagtgaactcattgctgcgttctacactctaccatgtgta
agtgatttcattattgacattttggtgggttgctcacagagtgatatacgtagtgcagca
gcagaccagttttaccagctcagtcagtccgaagttacacatctagaatcatccagtaac
ccacaaacaccccaccattttctgctacaagtactgctgaaagcttaccttccattctgg
gtctcatcctcatcaacacgtggagctagtcagaggttactaagtcagtgttctcagtac
tttgatctcagatgtaaattgttagaaaatctctcaactgtagatcagaagcagtaccag
gtagatatatctggcatgctggaggacgaggtcgcctggttatctaactttgtaccgaca
gaacatcctgacctgaaggaaacagacaatttactgttagcaggacatctaaaattgatc
aaaacactgttcacgtgtgaggagatctgcaaggaagaatatggaaagtcattagttcat
gatttactacatgactttttgttcccggcttcaaagacaatgatggacagtatgaatgga
ggaaccaatgaccttcttctttctgagttcaatcctaagtgcaataaaacagagtcaagg
atagcagcatatgaattgatcactgaactagcaaatgaatctctgagcaatttgaaagat
gtctgcagtcaactaatagagatgcatcaccaacctaatattgactgtgccaatgaatgg
gagtatttaccgccggttgatggtcgtgcaggttgcgggtatgttggtttacggaatggt
ggtgccacctgctatatgaactcggtgatacaacagctgtacatggtacctgggatacct
gatgctgtactcagtactgatgatgaggatattgatgaagatagtgtttactaccagata
cagcaggtgttcggcaacctgatggacagtcggttacagtatcatgaaccagagaagttc
tggaaggtgtttaagctgtggggagatccggttaacatcagagaacaacaggatgccttt
gatttcttccaagctcttatagatcagatagatgaacaactcaagaaaactggcaaagaa
gaaatattcaagaaaaaatttcaggggattttcactgatcaaaaaatctgcaaagattgt
cctcacaggtatgagcgagaagagacattcacagcattgaacctgactgtaaagaatgcc
acgttacaggattccctcgaccagtttgtcaagggagaactcttagagggagataatgca
tactactgtgagaaatgtggtgaaaagagaaatacaataaagcgtatgcatatcaaatca
ttaccaccaacactatgtattcaccttaagagattcggatatgactgggaagcaaataga
gctctcaagtttgatgattattttaagtttccatggatactagacatggaaccatataca
gcagaaggaatggcacggagagatgccgagtctaataaagaaactgaagaaccggagcag
caagtgatggattctcggtccggtgagactccaccaatggagatatccatcagtgttact
ccagaaaacaaacagatcaactacgagttagtgggtgttgttgtacacagtggacaggct
aatgctggacattattattcgtttataaaggagagacggggtacagtattaaacaacaat
aacaagggaaagtggtttaagttcaatgataccattgtagaagaatttgagatgagcgat
gctgcagtggaggcagaatgttttggtggaacatacaaagctaaagtttatgagcagtca
aattcttaccctgaggatcgcctacgttactggaatggttacatgttgttctatgagagg
atggaggagagtatgaccccattgtcagcaaagaaaagtaaaattgttacaagaaagttg
tggcctgatggtgttccgcaatgcagtagtaagcgggacagttttgttgagttgacagaa
ttagtgcataaaggtgaaagaaaaggaatcttcatggataaaatgcctgccagtatacag
cggtttatacatagtgaaaatctcacctttataaagaatcgtgatgtctataatgaagaa
tacttcagatttgtgaaaaacctggttgctgaaaactctaatcacacgaagcatgctgac
tatagtgatatgtgtatggtagcactaagactggctgtgaaatttctcttcaatacatac
ttcagaacaaagaagaaaacaagagcagagttagatgaatggatagatgttattgaggta
gttctgtccagatgtaaggaggcgtgtttctggatggtagagtatatggcgagtgaagag
ggtgccagctatatcagaccttttctgttggagtctccaaacacggatgtgagattgtcg
tttgctaaaatcttagagagaatgttgtgtagtttcctatcagaacatggaggattgcct
acccataaatgtttagatgagatattggtgcatttgttacaaatgttgaacaaagatgtg
atagatcattgcaaacacagtgtacagtatttcctcgttcttaaatgctatgtacagatg
ggaacaaaggcttgtatacatatgttcaagttaaatgggttcaagagtttagccacattt
ttgttagggaatcactcattatcatcctcatcgtcatcatcgatggaccaagagtcgcca
agtcggcgctggagctcgattcagtctcgggaatttggacatcttcataccattcttgca
acacttatactcaactgtgatgttaaagctttctggacaatagagcctgaaaatgctaaa
gtaaagaagccattgactgtcacacctcaaacgttcctgaaaatgtcagctgatatggag
agatatacatatggtcaggaatctatgaggtatctacgggaggttgtatcagccataaga
gaagttggaatgcctctgaagtctgttgaagacatgttactgtattgtagcttttgtaac
gagacattcagcactacactgcttaaacagttaatgatgcagtatatgaatgcaccatcc
aatgaactgaaacctgtattttctattctcactgatctgttgttgttagaggatcctctg
cagttaaaacgactacagttggttatagatgggcatgtagatgaccatgggcaacagttt
gaaggcctgttagctgtgataagactgaaccatgtacaggacagtcgtcgatcctactgg
tgtataaagttcctcgtcaaccttgttaacaagtgtcctctagttaaagatgacttgcag
caaaccaaatcaaaatggcagtgggcagtcaactggctgaagaaaaaaatgacagaatac
agttactggagttccagcagtacagccgcctcaaatgaagattctaacaggaagtccttc
cagagaaccatcagtgctcaggataccctggcagaagccacagctttgctcacagagctg
gagaactatgctgatatggataccaatgggaacagtgttgcctcccctacagagagtgat
actatggcatcaggagatgtgagtccaaggaatcagccgacagataaccagtctgattca
catatgtcaaccgggaaccagtcagatactcacatgtcaattatggaggaagacaaggga
gataagtctggcaaagatacagataactcttga
DBGET
integrated database retrieval system
