Mercenaria mercenaria (northern quahog): 123525434
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Entry
123525434 CDS
T07835
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mmer04054
]
123525434
Pattern recognition receptors [BR:
mmer04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
123525434
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR_2
TIR
LRR_5
LRR_14
LRR_LRWD1
LRR_EndoS
LRRNT
Motif
Other DBs
NCBI-GeneID:
123525434
NCBI-ProteinID:
XP_045160411
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All DBs
Position
3:complement(12058785..12064150)
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AA seq
919 aa
AA seq
DB search
MDKMSMIFLIIVTLWICSEKGSDGISEMLRNDMKIFIPNNGQTTLNSAKVCSDIPQCSCF
ELPSAKGLQVDCKERNLTNIPTNLPLNTTQLVLTMNFISSIPDNIFMNYTNMTFLDLSFN
TISQLGQNVFKGLENLEVLNLEMNQIRYMNTSIHSETFKPMTYLTAINLQQHLPDISKDE
RYPIKSLTYLKALQHLAMDGLPNQPFNEQFLKLKFLKILQLGGVQRCNITQVSRNMFKNL
PNLTDLTIQGCKLKSIQNQSFIEIPKLETLNLSHNEELEFKSFANISYGLQFTNIQKLAL
IKIHATFGDCTILTDENLRYLHNTSLKYIFLDSNRLALFESKAVRYIPRSLIGLSLKDNK
LMLGEYVIQIVIDIAFHNLFANLKNFLIASQRVNHSFKELFKHMTLAEIVNMFADHNKQK
RSLQFLRKEILSGKDTDISQPVPKANIQDLSKILLLKYFGDKCRSCKNISTSIIPLPLPP
NLTVADLSNLKIRTVVRPLCFCENKLQNLSLNMNTFWYWKGPLVGLNELTYLNMQWNYCE
RISLDFFHYLPKLQLLYISGNFLGFPLSTDSDGIIFGKLAKLKVLHMTDNKIKFLPPTIF
KGLKSLRELYLQSNQLDIISWNMDHMSKLRLVDLRGNQIVTIDENVRQHWDRLASTGSFS
VNLVNNSFSCNCKNLDLLKWFSETNVNFTDYDEYKCKFDNGTHGNLVHVDMISRSLTKEC
ANYFIVILATCLAILSGLITVAAGLAYRYRWNLRYMYYSAKFKLKGYSPVNTEEADFQND
VFVSYADSEGTFVRRHLVPELENNRGLNLLVHDRDFRAGNFVNDNIMHAITTSRKTLIIM
SRNFLRSKWCCYEMNMARMEGIKTGRDVVCILMKEEVPTSGLPLEIIDIISQKTYLEYPD
DNQNHLQQFWDRLADAIKQ
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatgagtatgatcttcctcattattgtaacattatggatatgttcagaaaaa
ggaagtgatggcatatcagaaatgttaaggaatgacatgaagatatttattccaaacaat
ggacaaactactttgaattcagccaaagtctgctcagatatcccccaatgctcttgcttt
gaactcccctctgcaaagggactacaagttgactgcaaggaaagaaatctgacaaatatt
ccgaccaacttgcctctcaatactacacagcttgtattaacaatgaattttatttcttca
attcctgacaacatctttatgaactacacaaacatgacttttttggacttatcgttcaac
acaataagtcagcttgggcaaaacgtcttcaaaggattagaaaacctcgaagttttgaat
ttggaaatgaatcagatacggtatatgaatacttcaatacattctgaaacattcaaacca
atgacctatttgacagcgataaatcttcaacaacatttaccagatatctcaaaagacgaa
aggtacccaataaagtctttgacatatttaaaggcacttcaacacttggctatggacggt
ctgccaaatcaaccatttaatgaacagttccttaaactcaagttcctaaaaatccttcaa
ctcggtggagtacaaagatgtaatattacacaggtctcccgcaacatgtttaagaatttg
ccaaacttaactgatctcacaatacaaggctgcaaactaaaatccatccaaaatcagagc
ttcatcgaaataccaaaacttgaaacactaaacctgtcccataacgaagagcttgaattc
aaaagttttgcgaacatttcttatggcttacaatttactaatattcagaaactggcttta
ataaaaattcatgcaacatttggtgactgcactatacttactgatgaaaacttaagatat
ctacataatacttcactgaagtatatttttttagactctaaccgacttgcactgtttgaa
agcaaggctgtccgctacatccctcgcagtctgattggtttatcattgaaagacaataaa
cttatgctcggagagtacgttatccaaatagtgatagatatagcatttcataatttgttt
gcaaatctaaaaaattttctaattgcttcacaaagagtcaatcacagttttaaagaactg
tttaaacatatgactttggctgaaatagttaacatgtttgcagaccataacaaacaaaaa
agatcccttcagttcctaagaaaggaaattttatcgggaaaagacacagatataagtcag
cctgtacctaaagctaacatacaagatctcagcaaaatactattattaaagtattttgga
gacaagtgcagaagttgtaaaaacatttccacaagtattataccactgccactcccaccc
aatttaactgttgcagatttgagcaacttaaaaattcgcacagtggttcgacctctctgt
ttctgtgaaaacaaattacaaaacttatcactgaatatgaacacattttggtactggaaa
ggaccgcttgttggattaaatgaactgacatatctaaatatgcaatggaactactgcgag
agaatttcgttagacttttttcactaccttccaaaacttcagcttttgtacatctctgga
aactttctcggatttccacttagtacagatagtgatgggataatattcggcaaactggca
aaattaaaggtactccacatgactgacaataaaattaaattcctgccgccaaccattttc
aaaggattaaaaagccttcgtgagttatatctacaatcaaatcaattagatatcatcagc
tggaatatggatcatatgtctaaacttagactggttgatttgagaggaaatcaaattgtc
accattgatgaaaatgttcgccaacattgggacaggcttgcttccactggttcattttct
gtcaatttggttaataactctttcagctgcaactgcaagaatttagatctgctaaaatgg
ttttcagaaacaaatgtgaattttactgactatgatgaatataaatgcaaatttgacaac
ggcacccatggaaacttagtccatgtggatatgataagcagatctttaacaaaagagtgt
gctaactatttcatagtaattcttgctacatgtctggccattctttcagggctaattaca
gtggctgctgggttggcatatcgctacagatggaatctgcgttacatgtattactccgca
aaattcaaacttaaaggatatagtcctgtaaatactgaagaagcagacttccaaaatgac
gtttttgtttcttatgctgacagtgaaggcacttttgtacgtcgtcacctagttcctgaa
cttgaaaacaatcgtggacttaatctactagtgcatgatcgtgacttcagagctggaaat
tttgtaaatgacaacatcatgcatgctattacaacatcgcgtaaaacactgataatcatg
tctagaaatttcctgcgaagcaagtggtgttgctatgagatgaacatggctagaatggaa
ggtatcaagactggacgagatgtcgtctgcatccttatgaaggaagaggttccaacttct
ggcctaccccttgaaatcattgacattattagccagaaaacatatcttgaatatccagat
gacaaccagaatcatttgcaacagttctgggatagacttgctgatgcgatcaaacagtaa
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