Mercenaria mercenaria (northern quahog): 123525688
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Entry
123525688 CDS
T07835
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123525688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123525688
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123525688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
DUF745
XRCC4_CC
RBD-FIP
ACBP4_C
ATG16
Motif
Other DBs
NCBI-GeneID:
123525688
NCBI-ProteinID:
XP_053394871
LinkDB
All DBs
Position
3:complement(73373709..73468578)
Genome browser
AA seq
2427 aa
AA seq
DB search
MAGSMGISTLLDSNEYSSLSEEAKNNIVNCFSNTQKDAQDVRANLEKLRVNSEQQYFEVE
KQLITCNTKLEAESSANEQLREQIAELEKKYNEASQKLRGLEDSQEGSLSTQLRLTKVNE
QLECEKREFAILLEKRNREIDNLNDEMKQMSRKLSEVNTAKFEAIANLDEVKSGEVNKEF
QIKRLEQETQNLQKQIDWLNNDMTEKTKELMNVRREKSTKLLEVQSELESKTEECSLLQT
TIESLRKNNTEQAHRIETYIQRIKDIQDSTTQSEEQFKQEINARVKLAEIYKTSADEAEA
KSKEFLSAVTELQKLLKEAADAHTAMENEKDEEIQKLRDDMEQREKRIESLEQELVNAND
LLSAMKSKGMSEDKVEAMFPTAAATSKMLKSGMTLTQIYNEYVQATDTLQFEKEENKRLN
SYLDQILQEIEEKAPMLKKQREDYEIALKSIDQMTRQLDAAMLESQTLRSESDESHRKSS
HLMKENQKLQQQIRDLSEQVKYLVKEMEELRGGRVVREDVSSPEVSSSSRLISDRLVTFG
NIDELQDQNQKLLAVIRELSDKQEQEENAAIDVRTKELKEQLEQAQEELAELKDSRLRQS
EMVESIVRQRDMYRILLQQANASPTPDTSFSRLGESKSPAKSLLKSPGSEATEKKIDEAN
KALKQLQAEFTSYKKEKLENDKIMNEQIDKSRQEMGDLRIQNAKLASQLDFAAERNKAFV
SNAEGYKREIAMLQDKLQKYTASVYKHEQTINSLRQELMAAQEQMSKAQARADNLRADKD
LIRSSEQRVIAELESIRRERHTQTMLMANLQAIQNNLERSEKETKFGLGKQIETLEREKT
FLKKRLETEDRQHTTITKHWEKQVQELRGQIEQELKSHQNTKDQLGTKDKQMQEMKQQLM
TVSTKLATAETRLENLTDDTGGGNVEELKELRASLEQSRAEVDSLQTQLQKAKQHVEQYK
TIADSIQQTIVKQNEASDNFKTNLEERLREAEEERTHLSSQIETLEAERQELLNENIRIT
EESHNLNADLRKNLAEIQNELQEVTERRETAIALEMSAKQECENQTQLAADAQDKYEREL
MLHAADVEALSAAKKQLEGFNAKLMEKEEQARIAELQLKEYKASSEEREKMLREERDKMA
ARVKDLVQETQALHQQMGKLSNQVVSVQERAAATPRRFAGAQTQDDSSKSSEQLLEVVRY
LRKEKDISEGKLDVVETECSRLKQRCDSLEKQLESANTQLSEEREQRQAEAQTAAQHAEL
MHRVESYNLLHDSNKLLREERDQLQGQLTQAEAKLTKLEETIRPLQSEIRELQSQRDALA
IDKKSILGEVERWRNRTNQLIEQSHKTDPEEHKRLIQEREEMRKQVNSTTDELHKAKAEA
TKAGIEVAKLQRQLTQLKDEHTKLSEESKKIKEELDKESKENAEKAKTIVQLKRVGRKYK
DQAETTTKEFEEYKAKQGENTEKQLQANVEKMKELEQTVKEQDENLATVKNSLQEVTSKN
TENENKLKNVENTKQVLENSLKDSEEKRKNLEQRLLAVTAEKEHIEQAMEQKTQQQQQQQ
VESAKITQLQQQINKLNEDSNKVKEEKSEVEKKLTRAHQMLQSAKTKLQSMKEINEKLTS
ERLEMKKKISEQTNTSNASNEEAELRESKLKEFESQIETLKQEIASRDNTIAELQKNIQQ
LQKQLDSQKATSQPAVQASRSAGSVAQDRTSSSPSEPPKTANIRPIASSPASIKPQTVPV
QPQSAASKVMASIRPMAIAPTSVSPITTSLGTPTATVMPTTAVSQQEIVTEEELVTPVQQ
LFPQSTSVGGRPTQQVQRVIPNQESASVESIPESTTETVVVEPVQSTSRETPVVAIQQTA
KRQREELESPGDDTVVKRTRVSTSEPDSSEIPEITISEVVPQEAPEDSQEAAEGDGAQEP
EETEAQTQGEDTEEGTPSQLPESEQQVEEQAEGDDMQEGQGVSEEGEQVESGEVEDDGAV
IIVESEDEEEQEDQPEDDGDEEDEEDEEEEEEDGDDDDDEGMEYGGEGQVEEEFDIGPPD
IDEMEDGGYSEERGGNMQTGEQSQGDDDVVIIDEDDDDDAGMESQEPDSQPASQSSSQTS
QQSLVPPLQPIMSMPERQLSVGGRSQLTPFMIGATGSGFEVDLDDCTVPSTPTLNVPRRM
DGFAEAVSSPQVSQRFVFGSGGSEQNLSMLQLDAQEALGMGMDDTRMDLSQLEEGSGRSV
PSTPLHTTAPVTVITEAADTLPSQSETAVTSVSQSELETQEEVESGMVQFDEGEGDVVDL
GGEDFEGELGEEDSQEEDYEQSQETEDRSQPETERDIAGDVEASSSREDVPVSSSTDKPQ
DASKPKIQKIIWDAPAPSQTTVSPAASASSPIPTVTQMGQQQYRQGRGGPQRGMPPQRMN
RGGFQRGQRRPMRSRGGMVYQRRPPMY
NT seq
7284 nt
NT seq
+upstream
nt +downstream
nt
atggcggggtccatgggaatttccacacttttagattcaaatgaatattcatcgctttct
gaagaagcaaaaaacaacatagtcaactgtttttcaaatacacaaaaagacgctcaagat
gtgcgggcaaatttggaaaaattacgcgtaaattcagaacaacaatattttgaagtagaa
aagcaactaattacctgcaatacaaagcttgaagctgagtcttcagccaatgaacagctc
cgtgagcagattgcagaactagagaaaaagtacaatgaggcttcacaaaaactccgtgga
ttggaagactcacaggaaggaagtctttcaacacagttacggctaacaaaggtgaatgaa
cagctagaatgtgagaagagagaatttgctattcttcttgagaaaagaaatagagaaatt
gataacttaaatgatgaaatgaagcagatgtcaaggaagttgtcggaggttaacactgcc
aagtttgaggccatcgcaaatcttgatgaagtaaaaagtggcgaggtcaacaaagagttt
cagataaagaggttagaacaggaaacacagaatttacagaagcaaattgactggcttaac
aatgatatgacagaaaaaacaaaggaactgatgaatgtcagacgagaaaagtcaacaaaa
ttactggaggttcagtcagagcttgaatcaaaaacagaagagtgcagtcttcttcagaca
acgatagagtcactacggaaaaacaacacagaacaagcgcacagaattgagacctacata
cagagaattaaagatatacaagacagtacgacccagtcagaggaacagtttaaacaagaa
attaatgccagggtgaaacttgcagagatctataagacatcagctgatgaagcagaagct
aaatcaaaggagttcctcagtgctgtaacagaacttcagaaacttctcaaggaggctgct
gatgctcatacagctatggagaatgagaaagatgaagaaatacagaagttaagagatgat
atggaacagagagaaaagagaatagagagtttagaacaggagcttgttaatgccaatgat
ctgttgtcagcaatgaagtctaaaggaatgagtgaagataaggttgaagcaatgttcccg
acagcagcagccacaagtaaaatgttgaagtctggtatgaccttgacacagatatacaat
gaatatgtacaggccaccgacacactgcagtttgagaaagaagagaataaacgacttaac
tcatacctggaccaaatactacaggaaatagaagagaaggccccgatgttgaaaaaacag
agagaggattatgagatagcattgaagagtatagaccagatgacgagacaacttgatgct
gctatgctggaatctcagacattacgtagtgaatcagacgaaagtcacaggaaatcatcg
catctcatgaaagagaaccagaaactacaacaacaaatcagagatctctcggaacaggtg
aagtatttagtgaaggagatggaagaattgcgaggtggtcgtgtagtcagggaggatgtc
tcgtcacccgaagtcagcagttcttccaggcttatatcagacagactggtcacctttggg
aacatagatgagctacaggatcagaatcagaaactgttggcggtgatcagagagctgtca
gataaacaagaacaggaggaaaatgcagccatagatgtcaggacgaaggaattaaaggag
cagctagaacaagcacaagaagagctggcagaattgaaggactcgaggttaagacagtct
gaaatggtggagtctatagttaggcagagagatatgtacaggatacttctacagcaggca
aatgcttcacctactccagatacatcattttcacgccttggtgaatcaaagagcccagcc
aaatctttactgaagagcccaggttctgaagcaacagagaaaaagattgatgaagccaac
aaggcattgaaacaactgcaggcagaattcacatcatacaagaaagagaaattggagaat
gacaagataatgaatgagcagatagacaagtccagacaggaaatgggagatctacgcata
cagaatgccaagttagcttcacagcttgactttgctgctgagagaaacaaagcatttgtg
agtaatgccgagggatacaagagggagatagcaatgttacaagataaactacagaaatat
acagcatcagtctacaaacatgaacagactattaactcactcagacaggagttgatggca
gcccaggagcagatgtcaaaggcccaggcacgtgctgacaatctccgagcagacaaagat
ctcatcaggtcatcagaacagagagtgattgccgagctggaaagtatacgcagggagaga
cacactcagaccatgttaatggctaatctacaggcaatacaaaataatttagaaagaagt
gagaaagaaacaaagtttggattagggaaacagattgagactttagaaagggaaaaaact
ttcctgaaaaagagactagaaaccgaggatagacagcatacaactattaccaaacattgg
gagaaacaagtacaggaactgagaggtcagattgaacaggaactgaagagccatcagaac
acaaaggaccaattgggaaccaaagataaacaaatgcaggaaatgaaacaacagcttatg
acagtttcaactaaactggcgactgctgaaacaagactggaaaatctcacagacgataca
ggtggaggcaatgttgaggagttgaaggaattgagagccagtctggagcagtctcgggcg
gaggtggacagtctacagacacagttacagaaagccaagcaacatgtagaacaatataaa
acaatagccgatagcatacaacaaactatagtcaaacaaaatgaggccagtgataatttc
aagacaaatttagaagagagactaagggaagctgaagaggagcgtacccatctgtcatca
cagatagaaactctggaggctgagagacaagaattgctcaacgagaatatcaggatcaca
gaggaaagccataacttgaatgcagatctgcgtaagaacctagccgagattcagaatgaa
ctacaagaagtcactgagagacgggaaacagccattgccttggagatgtcagcaaaacaa
gagtgtgagaaccagacgcaacttgcagcagacgcacaagacaaatatgagcgggaactg
atgttacatgcagctgatgtagaagcactgagcgcagcaaagaaacaacttgagggtttt
aatgctaaactaatggagaaagaggagcaagctaggattgcagaattacagcttaaggaa
tataaagcatcatcagaggaaagggagaaaatgttgagagaggaacgagacaagatggct
gccagggtgaaggacttggtgcaggagacacaagcactacatcagcaaatgggcaagttg
agtaaccaggttgtatctgtacaagagagggcagctgcgacaccacgtaggtttgctggg
gctcaaacccaggatgacagcagcaagtcctcagaacagcttcttgaagttgtaagatat
ttgagaaaggagaaggatatatcagaaggcaagttagatgttgtagagacggaatgttca
agattgaaacaacgatgtgatagtttggagaaacagctagagtcagcaaatacacaactg
tccgaggagagggaacaaagacaggctgaggcacagacagcggcccagcatgcagagttg
atgcacagagtagagtcttacaacctgttacatgacagtaataaactgttgagggaggag
agggatcagctacagggacagctcactcaggctgaagctaagctcacaaaacttgaggag
acaattagacccctgcaatcagaaatccgtgaactgcagtctcagagagatgctctagcc
atagataagaagtctatattgggagaggttgaacgatggcgaaacagaaccaatcagctg
atagaacagtcccataaaactgacccagaggaacataaacgtctcattcaggagagagaa
gaaatgaggaaacaggtgaacagtaccacagacgagttacataaagcaaaagcagaggca
actaaagcaggcatagaggtagcaaaactacagaggcagttaacacagttgaaagatgag
cacacaaaactaagtgaagagagtaagaaaattaaggaagaacttgataaagagtcgaaa
gagaatgctgaaaaagcaaaaactattgttcagttgaagagagtgggtcggaagtacaag
gaccaggctgagacaacaacaaaggagtttgaagaatacaaggctaaacaaggggaaaac
acagaaaaacaattacaggctaatgtagagaaaatgaaagaattagagcagacagtcaaa
gaacaagatgaaaacttggcaacagtgaagaacagcttgcaagaagttacatcgaagaac
acagagaatgaaaataaattgaaaaatgttgaaaataccaaacaagttcttgaaaacagt
cttaaggattcggaggaaaagagaaaaaatttggaacagaggttgcttgcggttacagca
gagaaagagcatatagagcaagcaatggagcagaaaacacagcaacaacaacaacaacaa
gtagaatctgccaagattacacagctacagcagcaaataaacaaattaaatgaagactcg
aataaagtgaaagaggaaaaatcagaggtagagaagaagttaactcgagcacaccagatg
cttcagtcagccaagacgaagctacagtctatgaaagaaatcaacgagaaactgacaagt
gagagactggagatgaagaagaaaatttctgaacaaacaaacacttcaaatgcttctaat
gaggaggctgagttacgtgaaagcaaattgaaggagttcgaatcccagatagaaacacta
aaacaagaaatagcatccagagataatactatagctgaacttcagaaaaatatacagcag
ctacagaagcagttagacagtcagaaggcaacatcccagcctgcagtgcaggcatcaagg
tcagctggtagtgtggctcaggatagaacaagttcatcaccatcagaaccaccaaagaca
gctaatatacgtcctatagcctctagtcctgccagtatcaaaccccagactgtccctgta
cagccacagtcagcagcctcaaaggtgatggccagcatacgtcccatggcaattgcgcct
acctcagtatctccaattactacatcgttaggaactcccacggcaacagtgatgccaaca
acagcagtctcacagcaagaaattgttacagaagaagagttagtaactcctgtacaacag
ttattcccacaatcaacatctgttggaggcagaccaacacagcaagtacagagagttatt
cctaatcaagaatctgcaagtgttgagagcattccagaaagtacaacagagactgtagtg
gttgaaccagtacagtccacttctagagaaacacctgttgttgccattcagcagacggcc
aagagacagagagaggaattagaaagccccggagatgatacagttgtaaagaggaccaga
gtttctacctcagagcctgattcaagtgaaatccccgagatcactatttctgaagttgta
ccccaggaagctcctgaagactcacaggaggcagctgaaggtgatggggcacaggagcca
gaggaaacagaggctcaaacacaaggggaggatactgaggaaggaactccaagtcagtta
ccagaatcagaacagcaggttgaggagcaggcagagggagatgacatgcaggaaggtcag
ggtgtgtctgaggagggggagcaagtagaatctggggaggtggaggatgatggagccgtg
ataattgttgagagtgaagacgaggaggagcaagaagatcagccggaggatgatggtgat
gaggaagatgaagaagatgaggaggaggaggaagaagatggagatgatgatgatgatgag
gggatggagtatggaggcgagggacaggtagaggaagaattcgatattggtccacctgat
atagatgagatggaggatggagggtacagtgaggagagaggaggaaatatgcagactgga
gaacaaagtcagggtgatgacgatgttgtaattatagatgaagatgatgatgatgatgca
ggaatggaatcccaggaaccagactctcagcctgcaagccagtctagtagtcaaaccagt
cagcagtcgctggttcccccactccagcctattatgtctatgccagagaggcagttgtct
gtgggaggcaggagccagcttacacctttcatgattggggcaactggttcaggttttgaa
gtagatttagatgactgtacagttcccagtactccgactctgaacgtcccacgtagaatg
gatggttttgcagaggcagtcagctcaccacaggtttcacagagatttgtatttggtagc
ggaggaagtgaacagaatctctcaatgttgcaactagatgctcaagaagcattgggaatg
ggtatggatgacactcgtatggatctatcacagctagaggaaggatcaggtcgcagtgta
ccatcaacaccactacatacaactgctccagtgacagttatcactgaagctgctgataca
ttgccaagccaatcagaaacagctgtcacatctgttagccaatcagaacttgagacacag
gaagaggtggagtctggcatggtacagtttgatgaaggagagggagatgttgttgatttg
ggaggggaggattttgagggagagctgggcgaggaagactcccaggaggaggactatgaa
cagagccaggagacagaagataggtcacagcctgagacagagagagacatagcaggggat
gtggaagcaagctccagcagggaggacgtccctgtaagctcaagtactgataaaccacaa
gatgcttcaaagcctaaaatccagaaaataatttgggatgctccagcaccgagtcaaaca
acagtaagtcctgcagccagcgcaagttcaccaatacctacagtcacacagatgggacaa
caacagtacagacaaggtagagggggcccacagaggggaatgccgccacagagaatgaat
agaggaggcttccagcggggtcagagacgaccaatgaggagccgcgggggcatggtatat
cagaggagaccacctatgtattga
DBGET
integrated database retrieval system
