Mercenaria mercenaria (northern quahog): 123525743
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Entry
123525743 CDS
T07835
Name
(RefSeq) HEAT repeat-containing protein 1-like isoform X1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123525743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmer03009
]
123525743
Ribosome biogenesis [BR:
mmer03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
123525743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BP28CT
HEAT_HEATR1
U3snoRNP10
HEAT_EF3_N
DevR
RHD3_GTPase
SRC-1
Motif
Other DBs
NCBI-GeneID:
123525743
NCBI-ProteinID:
XP_053394591
LinkDB
All DBs
Position
3:55439232..55507956
Genome browser
AA seq
2159 aa
AA seq
DB search
MDSKTDVKMTSLAKQLQRLAVPHTQTILGEDKKKASLLFDPKEAASIDRETFHALGLNGL
EELETIDEDFSDFETSLFGDSSLMFERSVQTKDVNAKLDKTIQRFLIHVSPYCLLKPAHK
ALEWLVHRFHIHFYNTDELLLCFLPYHESKIFARVLQLIKFDSRISSKWDFLEPLQKSGV
HLSRMTLVNHCATDPAFLSFVCEMVPTAVEVLTEKGEVPKCRVLFSFYATTVIGVLETTS
VSEVILSTLLPHLTTGMKSAVLEYKAASYMIFAQLLHKTKLTPDLVKSLQQILAKSMVPD
LLGEAVSCMILMFQTQDVSKHRITKKTFKYMCRHYTVVDVIGQLHAQFEASQFLTYFLDR
LIPAAFQHAVGIATSGESSESESSGGLKEYMSMLHRLLSSVSLPDETAENAAYTFLGVYI
KHGNKHLDNDVDDRIKDSLQGIVRQLEGKHSAAVDRAVSRTLKGCKKSQEKNLVNEFLNL
YVLSVPHQLVTDSETSLVLSLNHRLQSVREKAVSMLIQNRKGLEEETFLKDSLTLRLKDE
SPGVVQAALSIGQELWSVVGDDVQTVKLLQKPILNGLDDKQWEKSACLAAEILGSYSGDL
DIEVFTSCLPCLFVTHESKVSLEIIGLLLNSTLTSDHPVLMKIKKEWNTVSKTMKKQSAD
VGLLDTSTARCLAEGLCQAVTQNQIQIVKDWTELAGKADSARIACLMLVVLDNLVSMVTD
PRKRLEICLLQLQLVDSLQKAQVVRHHEVAMTDIQKSWDEIIASDHKVTKAVRQGQVSRL
LCQKAVAGLVQVLKIPQQLIKALVWQLQGDDSEGDLFLRVTVLLYRLLVTEVSRKDGQVY
RMLYQSLQKTCFTNADIYLKFLCLLWTQHANDQATDLGLTLTLQARSLHLGLAFVKSLAG
KERERCLQLPTVVSSVLLLLTSEQAHIRQAGIQYTQELLSKAKKDNSMFFSLLKKVIRCE
EEIKSDSLYINQIIGSHFKHTQLTEVVAKKSKQKEKRRSMDGVQEKDGRQLALKAMLELI
VNQSTPEYMQYKMLYIFSLLNNKEVLDALIPLMDRLLTQPIDSMPEIASKCLNLLVERFT
LDTSDCLSKDSQGLQLFTKTLKLHQEVSEGSHTSQMVAVTQVTKELFSALEDDSQHEILR
TLFDVCVDTKHLVVANLVRKTLKHLSVNGEHIEKELRKCLHQPTATTVREAKRLKKPDPT
PEAAGDTEFDSRTWQRVTVVLETVQNKKKIQNYTCLVPVCFQLMSSILESDNHVAVEYIK
QLILALLYNICTRVDKLEDSDVVPEQQFNMDLIISCIRSSDNPQTHHHALLLLTAAARIY
PEHLLHNMMSVFTFMGANIMRQDDAYSFLIISKILETVIPALITACEQRKRVPKGITNDP
DDIITMVIQVFVDSYPYIPEHRRHLLFNKLLTVTGEDRYLWRTLLLMMKHVVTKGTLRAE
LTTDSQEVSSDTEFCLTMCAEFTSAVQLSSAREMMEYLLKLPDDKDDDAAKTVRKGQKAQ
SFGKLHKEDALVFNVAVHTGKQLRHFKYATINLLVNLFTSTDFLMQLSENEEDLSGVFQM
VLETALKLVSHVTHAANRSNTKPTAKYWRALLHKTHDMLDKFVSLLPDGLFLTVIGGLLS
HDLATIQRKAMDLLNTKLQQQKEMKESEAEAMLPLVDQLRELVTQLALGGTVTEEGSVNC
QTAFISLKLLCRHLGYNHKGEFSQVLKTAVAVFQHTSTSVQVSSCALLCIAEVVSTLKMH
VIHQLPKFMPALIKVMADREKLFRNELYVMSVVTAVNKVVENLSNFLSPFLHDILVNVCM
LSSEASQYDILQKPQVSLRLKTIRTTLSTNIPTRVLLPVVTTCYTSLVKSDLMSVSSLMS
LFGEHVSHITREDLTSHLPQLQTFFLHCLDIRIDFPQLNQEKLAELESVTIETIITMVMK
LSESTFKPFLFKVFDWATTSEEFRERILVFYKLAERLAERLRSLFTLFAGHIITHAAKML
DENNNMKQEDKFFQADNAKYSRSCQLLEFILDCINKCCVYDTEGFINKERFDLLMQPLVD
QLENQQGGEVMYEKRINEHLVPCIVQLCVAAQDDSLWRALNYQVCLKTRNQQSTVKQSAL
ITLDILHKKLGEDYMPLLPDTIPFLAELMEDESEDVEKKCHEVIREMEKTLGEPLQKYF
NT seq
6480 nt
NT seq
+upstream
nt +downstream
nt
atggatagcaagactgacgtcaagatgacttctctagcaaagcagctacagcgtcttgcc
gttccccacacccagactatacttggtgaagacaaaaagaaagcttctttactttttgac
ccaaaagaagcagcctctattgacagggaaacattccacgctcttggtttgaatggtttg
gaggagctggagactatagatgaagatttcagtgactttgagacaagtttgtttggagat
tcctcattgatgtttgagagatcagtccagacaaaagatgtaaatgcaaaactggacaaa
accatacaaagatttctgatacatgtgtcaccatattgtctgcttaaacctgcacataaa
gctctagaatggcttgtacataggtttcatattcatttctacaacactgatgaactgttg
ctgtgtttcctaccataccatgagagtaagatatttgcaagagttcttcagctgatcaaa
tttgactcaaggatttcctcaaaatgggatttcttggaacctttacagaaatccggtgtt
catctttcaaggatgactttagtaaatcactgtgccactgatccagctttcctgtctttt
gtttgtgagatggttccaacagctgtcgaggtattaactgagaaaggagaagtcccgaag
tgtagagtattattttccttctatgctacaacagtgattggtgtccttgagacgacctct
gtgtcagaggtcatcttgtcaaccttactgccccacctaactactggaatgaagtctgca
gtgctggaatacaaggctgcctcatatatgatatttgcacaacttctccacaagacaaaa
ctaactccagatcttgtcaaatctttgcagcagattttagctaagagtatggtaccagac
ttgttaggagaggctgtttcatgtatgatactcatgtttcaaactcaagatgtcagcaaa
caccgtatcactaaaaagacattcaaatacatgtgtcggcactacactgtggtagatgtt
ataggccagcttcatgcacagtttgaggcctcacagtttctaacgtatttcctagatagg
ttaattcctgcagccttccagcatgctgttggcatagcaacaagtggagagagtagcgag
tcagagtcctctgggggcttgaaagaatatatgtccatgttgcacagactcttgtcatct
gtcagtcttccagatgaaacagctgaaaatgctgcttacacattcctgggtgtctacatc
aagcatggcaacaaacatctggataatgacgttgatgatagaatcaaagacagtttacag
ggcattgttaggcagctggaaggaaaacattcggcagctgtggacagggctgtcagtaga
acactgaagggatgtaagaaatcccaggagaagaaccttgttaacgagttcctcaacttg
tatgtgctctcggtaccacatcagctggttacagacagtgaaactagcctggttctctca
ttgaaccacaggctacaatccgtcagggaaaaggctgtctctatgcttatacagaataga
aaggggcttgaagaagagacatttctgaaggactcccttactttacgactcaaagacgag
agtcctggagttgtacaggcagctttatctattggtcaggagttatggtcagttgtaggg
gatgatgtacagacggtgaaacttctgcagaaacctatcctgaatggcctagatgataag
caatgggagaagtcagcatgtttagcagcagagatattagggagttactctggtgacctt
gacattgaagtatttacaagttgtctcccttgtttatttgtgactcatgagtctaaggtg
tctttagagataatagggctgttgttgaactctacgcttacatcagatcatccagtgcta
atgaagatcaagaaagaatggaacactgtttctaaaaccatgaagaaacagtcagcagat
gttggactgttggataccagtacagcaaggtgcctggctgaaggtctgtgtcaggctgtc
acacagaatcaaattcagattgtcaaagactggactgaactggctggaaaagccgatagt
gcaagaattgcatgtttgatgctggtagtacttgacaaccttgtctccatggttactgat
cccagaaagaggctagagatatgtttgttacagttacagcttgtagatagtcttcagaaa
gcacaggtggtcagacaccatgaagtggctatgacagatattcagaagagttgggatgaa
ataatagctagtgatcataaagtaacgaaggcagtaagacagggtcaggtatctaggtta
ctgtgtcagaaggcagttgctggtcttgtccaggtgttaaagattccacaacagctgata
aaagcactggtatggcagttgcaaggggatgacagtgagggtgacctgttcctgcgtgtt
acagtgcttctgtacagacttctggttactgaagtttcgagaaaagatggacaggtgtac
agaatgttgtaccagtcactgcagaagacatgcttcactaatgcagacatatacctgaag
tttttatgcctactatggacacagcatgctaatgaccaggccactgaccttggactgacc
ttgaccttacaggcaaggtcattacatctgggactggcatttgtgaaaagtttagcagga
aaggaaagagaaaggtgtttgcagttgccaacagttgtgtctagtgtcctgcttttactt
acaagcgagcaggctcacatcaggcaagccgggatccagtatacacaggaactactttct
aaggccaagaaagacaactcgatgttcttttccctcctgaagaaagtaattcgttgtgaa
gaagaaattaagtccgattcattgtacattaatcagataattggttcacactttaaacat
acgcaactgacagaagttgtagccaagaaatctaaacagaaagagaaaaggagatcaatg
gatggtgtgcaagagaaagatggcagacagttggctctgaaggcgatgttagaattgatt
gttaaccagtctacaccagaatacatgcagtacaagatgttgtacattttctcactgctc
aataataaggaagttttagatgcattgataccactaatggacagactactgactcagccc
attgacagtatgccagaaatagccagcaaatgtttgaatctgttggttgaaaggtttaca
ctggacacaagtgattgtctgtctaaggattcacaaggacttcagctgttcacaaagaca
ctaaagctacatcaggaggtttccgagggcagtcacacttcacagatggttgcagttact
caggtaacaaaagagctgttcagtgcactagaggatgattcccaacatgaaatattgagg
acattgtttgatgtatgtgtggatactaaacatcttgtagtggctaaccttgtcaggaaa
acactcaaacatctgtcagtaaatggtgagcatatagagaaagagttaagaaaatgtcta
caccaaccaactgctactactgtcagggaggcaaaaaggctgaaaaaacctgacccaact
ccagaggctgcaggagacactgagtttgactcccgtacttggcagagagtcactgttgta
cttgagactgttcagaataagaagaaaatacagaattatacatgcctggtacctgtgtgc
tttcagctaatgtccagcatactagagtctgacaaccatgtagctgtggaatatataaaa
cagctgattcttgccttactctacaatatctgtaccagagtggataaactggaggacagt
gatgtagtaccagaacagcagtttaacatggatttaattatcagctgtatacgttcctct
gacaatccacaaacacaccatcatgccttgttgttacttactgcagcagccagaatatat
cctgagcacctgttacataacatgatgtctgtgttcacatttatgggagctaacataatg
agacaggacgatgcctacagttttcttatcatcagtaaaatactggagacagttatacct
gcacttatcactgcttgtgagcagagaaaacgtgtaccaaaaggaatcacaaatgaccca
gatgatataatcaccatggtgatacaggtgtttgtcgactcgtacccgtatataccggaa
catcgacgacaccttctgtttaacaagctgttgactgtaacaggagaggataggtacctc
tggaggacactgttgctcatgatgaaacatgtggttacaaagggaacgttgagggcggag
cttaccacagattcgcaggaggtatctagtgacacagagttttgtctgacaatgtgtgca
gaatttacatctgctgtgcagttgtcgtctgctagagaaatgatggaatatctgcttaaa
ctgcctgatgacaaagatgatgatgctgcaaaaacagtcaggaaaggacagaaggctcag
tcgtttgggaaacttcataaagaggatgcccttgtcttcaatgtagctgtacatacaggg
aaacaactacgacattttaaatatgctacgataaacctgctagtgaacctgttcacaagt
actgactttttaatgcagctatctgaaaatgaggaagatttgagtggagtattccagatg
gtgcttgagacagcccttaagttagtgtcacatgtcacacatgctgctaacagatctaac
actaaacctaccgctaaatactggagagccctgttgcataaaacacatgacatgctcgac
aagtttgtttccctgttacctgacggtttgttcctcactgtgattggtggattattgtca
catgaccttgcaactatacagaggaaagccatggatttactcaacactaagttacagcaa
cagaaggagatgaaggagtctgaggctgaagccatgttacccctggtagatcagctgaga
gaactggtaacacagctggcactaggtggcactgtcaccgaggagggctctgtcaactgc
cagactgcatttatctcccttaaactgctgtgtagacatttaggatataatcacaaagga
gaattcagtcaggttttaaaaacagctgtagctgtattccagcacaccagtacaagtgtg
caggtgtcatcttgtgcactgttatgtattgccgaggttgtctcaacattgaagatgcat
gttatacaccagcttccaaagttcatgccagcactgataaaagtaatggctgacagggag
aaactgttcaggaatgagttatatgtgatgagtgtagtaacagctgtgaacaaagttgtg
gaaaatctgtccaatttcctcagtcccttcctgcatgatatacttgtgaatgtgtgtatg
ttgtcaagtgaggcttcacaatatgacattctacagaaaccacaagtgtctcttcgactg
aaaactatcaggactacattgtccaccaatataccaacaagagttttgcttccagttgtt
acgacttgctataccagccttgtaaagtcagatctgatgagtgtgtcatcattgatgtca
ctgtttggcgagcatgtgtcacatattacacgagaagatctcaccagccatctcccacag
ctacagacgttcttcctacattgtctagatatacgcatagacttcccacagctaaatcaa
gaaaagctggctgagttagagagtgttaccatagaaacgattatcaccatggtgatgaaa
ttgtcagagtcaacatttaaacctttcctgttcaaagtatttgactgggctaccactagt
gaggagttcagagaaagaatactggtgttctacaaactggctgaaagattggcagagagg
cttagaagtttgttcacattgttcgctggtcacattataacccatgctgcgaaaatgctg
gatgaaaataacaatatgaaacaagaggacaagtttttccaagctgataatgccaagtac
agtagatcatgccagttattggagtttatacttgactgtatcaacaagtgttgtgtttat
gatactgagggttttatcaataaagaacgatttgatctgctgatgcaacctcttgtagat
cagttggagaaccagcaaggaggtgaagtgatgtacgaaaagagaataaatgagcatctg
gttccctgcattgtacagctatgtgttgctgctcaagatgattccttatggagggctctt
aactaccaagtctgcctcaaaaccaggaaccagcaatctacagtgaaacagtcagcattg
attactctagatatattacacaaaaagttgggcgaggattacatgcctttacttccagat
actataccattccttgctgaacttatggaagatgagtcagaggatgttgagaagaaatgc
catgaagttatacgagaaatggaaaaaactctaggggagcctctgcagaaatacttctag
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