Mercenaria mercenaria (northern quahog): 123525856
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Entry
123525856 CDS
T07835
Name
(RefSeq) RNA helicase aquarius-like
KO
K12874
intron-binding protein aquarius
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123525856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmer03041
]
123525856
Spliceosome [BR:
mmer03041
]
Complex B
Other components
Prp19-related factors
123525856
Complex C
123525856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
DEAD
SLFN-g3_helicase
AAA_16
UvrD_C_2
AAA
DnaB_C
AAA_22
Parvo_NS1
NB-ARC
PhoH
RecA_N
Motif
Other DBs
NCBI-GeneID:
123525856
NCBI-ProteinID:
XP_053394067
LinkDB
All DBs
Position
3:28619985..28685553
Genome browser
AA seq
1394 aa
AA seq
DB search
MSEKTAQKTPGPKGVGTLTVEQIQEDRITQLAAELWSPAALKRNVQFKPEVVEEIYNKEL
VSTNFATKRVMMLEFSQYLENYLWPNFDPDKSSQSHVLSIILIINEKFRERVPPWSCFKK
KSEHFAAFFHHILEMTLSDVRSLKEQSYLIIFLIHCFRSLEMDLIREQVQRLVSLPIWTC
LIPGRREELFKANPKYRKFYNFIKRSDSKLSTEQKKKVEFERTFLNSLIHKYITVLNTVP
EKGKVGEEKIMYCERFVEFLIDIEAQLPTRRFFNALMDDSHVLSISLLSNLTNREDGKLF
SELLDMLKVYAEFEIDEGTGEALNLHNRIDLHYNRVLALQKVAFKHFPDLHQFAIANVAS
VDSRKSLLKYFNPLSTSDIHRILGHLNMLPMLEEGQDSTQDREFLLELLVSHHERKKSQL
EQINEMPLYPTEDIIWDENIVPTEYYNGEGTLALPKINLQFLTLHDYLLRNFNLFRLEST
YEIRQDIEDAITHMKPWKAEDGSTYFGGWARMAQPIAGFNVVEVAKPRVGESHPAQVRAD
ITVTLSVVQSIKNEWEGLRKHDVAFLISIRPPHDIGFKYDIKSPFIPQVGLMYVRGCEIE
GMLDAEGKVIEEGPEPKPELSGDTRTFRVWLDPNQYQHDMVATEDGAEDVYESFNIIMRR
KPKENNFKAVLETIRDLMNTDCVVPDWLHDLILGYGSPDAAHYKQMENRIPSLDWNDTFL
SIEHLFASFPGYEIELASENVQAQSPFRLSFVEEETESNKRKEGEDAPTPVQKIIVQPHV
IQNRGPYSYSQPKKNSIRFTPTQIEAIRSGMQPGLTMVVGPPGTGKTDVAVQIISNIYHN
FPDQRTLIVTHSNQALNQLFEKIMALDIAERHLLRLGHGEEALETEKDFSRYGRVNYVLA
QRLELLQEVARLQESLKVPGDVSYTCETAGYFYIYQVLARWEEFQSKIRKLKEKTTEKIK
ELFPFTEFFKNAPQPLFKGRNYAEDMDIAEGCFRHIKKMFTQLEEYRAFELLRSGSDRAD
YLLIKEAKIIAMTCTHAALKRRDLVTVGFKFDNIMMEEAAQILEIETFIPLLLQNPEFNN
NRLKRWIMIGDHHQLPPVIKNMAFQKFSNMEQSLFTRLVRLGVPTVDLDAQGRARSSIAG
LYNWRYKKLGNLPHAITNPEYRLANAAFAYDYQLINVENFNGVGESEPNPYFYQNLGEAE
YVVATFMYMRLMGYPAEKISILTTYNGQKHLIRDVINQRCSKNPFIGRPYTVTTVDRYQG
QQNDYILLSLVRTRTVGHLRDVRRLVVAMSRARLGLYVFARVSLFSNCFELTPAFNRLCS
RPTELHIDPQENFPTPRKIDEPPLHPPMVISDMPHMAQFVFDLYNQKIDSLMRMRNLPSA
ERLSEPPRARKEKS
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaaaactgcacagaaaacaccaggccctaaaggggttgggacactaacagtt
gaacaaatacaggaagacagaataacacagttggctgcagaactctggtccccggctgca
ttaaagagaaatgtgcaatttaaaccagaggtagttgaagagatatataacaaagagctt
gtgtccaccaactttgcaacaaaacgtgttatgatgctagaattcagtcagtatttagag
aattacctttggccaaactttgatcccgataagtctagccaaagtcatgtgttgtctata
atcttaattatcaatgaaaagtttagagagagagtaccaccatggagttgtttcaagaag
aaatcagagcattttgcagcatttttccaccatatactggaaatgacactgtcagatgtt
aggtcactaaaggaacagtcatacctcatcatattcctcatacattgcttcagaagtctt
gagatggacctgatacgagaacaagtacagagacttgtgtcacttcctatctggacatgc
cttatacctggtagaagagaagaactgtttaaggccaatccaaagtacaggaagttttac
aacttcatcaagagaagtgacagcaagttatccacagaacagaagaagaaggtggaattt
gagagaactttcttaaacagtctgatacacaaatatatcactgtgctgaacactgtacct
gagaaaggcaaagttggtgaggagaagataatgtattgtgaaagatttgttgagttccta
attgacattgaggcacagttaccaactcgacgattcttcaatgctctcatggatgacagc
catgttctcagtatctcactgctgtcaaatcttacaaatcgggaggatggaaaactgttt
tctgagttactggatatgctaaaagtatatgcagaatttgagatagatgagggcacagga
gaggcccttaacttacacaacagaatagatttgcattacaatagggtccttgctcttcag
aaagttgcctttaaacatttcccagacttacatcagtttgctatagccaatgtggcgagt
gtagacagcaggaagtccttgttgaagtactttaatcctctcagtacgagtgacatacac
aggatattgggtcatctcaacatgttgcctatgttagaagaaggccaggactcgacacaa
gacagagagttccttctagaactcttggtaagccaccatgagagaaagaaatcacagctg
gaacagattaatgagatgcccctgtaccctacagaagatatcatctgggatgaaaatata
gtgccaacagagtactataatggtgaagggacacttgcgttgcctaagatcaacctgcag
ttcctgacattacacgactacttgctgagaaacttcaatctattcagactagaatctaca
tatgagattcgacaggacattgaagatgccataactcacatgaaaccatggaaggcagag
gatgggtccacttattttgggggatgggcaagaatggcacaaccaattgcaggatttaat
gtggtagaggttgcaaagccccgtgtaggagagagtcaccctgcccaggttagggctgac
attacagtgaccctcagtgttgtacagagcatcaaaaatgaatgggaagggttgcggaaa
catgatgtagcatttttaatatcgatacgtcctcctcatgatattggtttcaaatatgac
ataaagtcacccttcataccccaggtgggcctgatgtatgtccgaggctgtgaaatagag
gggatgcttgatgcagagggaaaggtcattgaagaaggtccagaaccaaaaccagaatta
agtggtgatacaagaacattccgtgtttggttggatcctaaccagtatcagcatgacatg
gtagcaacagaagatggtgccgaggatgtctacgaatctttcaacattatcatgagaaga
aaacctaaagagaacaatttcaaggcagtgctggagacaatccgtgatctgatgaataca
gactgtgttgtaccagactggctacatgatttaattctaggatatggttctcctgatgca
gctcactacaaacaaatggagaataggattcccagcttagactggaatgatacatttttg
tcaatagaacatctgtttgctagtttccctggttatgagatagaactagcatcagaaaat
gtgcaggcacaatctccatttagattatcatttgttgaggaggagacagagagcaacaag
agaaaggaaggagaggacgcccccaccccagtacagaaaatcattgttcaacctcatgtc
atacaaaacaggggaccctactcctacagtcagcctaaaaagaacagtataagattcacg
cctacccagattgaagccattaggtccggtatgcagcctggtttgaccatggtggtaggg
ccacctggtacaggtaaaactgatgttgctgtacagatcatatctaacatctaccataac
ttcccggaccagagaacactcattgtcacacactctaatcaggctctcaatcaattgttt
gagaagattatggctcttgatattgctgagcgccatttgttacgtctgggtcacggtgag
gaggccctggagacagaaaaggatttcagccgttacggacgtgttaactacgtactggct
cagagacttgaacttcttcaagaggttgctaggttacaggagagtttgaaggtaccgggt
gatgtgtcatacacatgtgagactgcaggctacttctatatctatcaggtgctggcaaga
tgggaagaatttcagagtaaaattaggaaactcaaggaaaagacaactgaaaagattaaa
gagttgtttcccttcactgaattcttcaagaatgctcctcaacctctgtttaaaggcaga
aattacgctgaagatatggatatagctgaaggttgctttcgacacatcaagaaaatgttc
acacaattagaggaatatagagcttttgagttactgcgtagtggatctgacagagcggac
tacttgttgatcaaggaggcaaagataattgctatgacatgtacacatgctgcactgaaa
agacgagatctggtcacggtcggctttaagtttgacaacataatgatggaagaagctgct
cagatcttggagattgagactttcatacctttacttctacagaatcctgagtttaataac
aatcgtttaaagcgttggataatgataggagatcatcaccaacttccaccagtcatcaag
aacatggcattccagaaattctcaaatatggaacaatctctcttcaccagactagtccgc
ctaggagtgccaactgtagatttagatgctcagggcagagcaagatcaagtattgctggc
ctttacaactggagatataagaagctaggaaatcttcctcatgctattactaacccggag
tatcgtctggccaatgctgcattcgcctatgactatcaactcatcaatgtggaaaacttc
aatggtgttggggaatcagaacccaacccatatttctatcagaatcttggagaagcagag
tatgtggtagcaacatttatgtacatgaggttgatgggatatcctgctgagaaaatctct
atacttacaacatacaatgggcagaaacatctcatcagggacgttatcaaccagagatgc
tcgaaaaacccgttcattggcagaccatacactgtgaccacagtagacaggtatcaggga
caacagaatgactatatcttgctatccctggtcaggacaaggactgtaggacatctcaga
gatgtgaggagattggtagtggccatgtcgagagccaggcttggactgtatgtgtttgca
agggtttccctattcagtaactgttttgaactcactccagcttttaacaggttatgctca
agaccaacagagttacatatagatcctcaggaaaatttcccaacacctagaaagattgac
gagccacctctacatccaccaatggttatcagtgatatgccacacatggctcagtttgta
tttgatctctacaaccagaagattgattcactaatgaggatgagaaatctaccttcagca
gagaggttatcggaaccaccaagggcaaggaaagaaaaaagctga
DBGET
integrated database retrieval system
