KEGG   Mercenaria mercenaria (northern quahog): 123525941
Entry
123525941         CDS       T07835                                 
Name
(RefSeq) nucleoporin NDC1-like
  KO
K14315  nucleoporin NDC1
Organism
mmer  Mercenaria mercenaria (northern quahog)
Pathway
mmer03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123525941
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmer03019]
    123525941
Messenger RNA biogenesis [BR:mmer03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     123525941
SSDB
Motif
Pfam: Ndc1_Nup UBA2_C
Other DBs
NCBI-GeneID: 123525941
NCBI-ProteinID: XP_053393748
LinkDB
Position
3:complement(4837587..4869155)
AA seq 559 aa
METIDKWFQREVLQWRTGASVAWSVITLPVISIVYLFLTSFQLFHPLQWITGFVSGMFSF
TFVSTVILIMIVNAGFCIYSKNTFTVIPSMSITRFSQLPQLFKGSVMLYAVVCWGCGLLL
GWMCTCILGDRYASLSRKCAESSDLYCINEYHLFIVLYGGYSGLMYIVYHYIKQNNVLHF
PTLQQAKFFQVRGQIPRTGWSSLGHVIWQIKFFYIFYYLFGNIPRDAIAETLSLKHERES
RLDSLYGLLLDFALLWQTLLVGLFIQFSWSYGALLYKVYNTQSYEFPVSTMFENFKNKCL
VDALSCTKLRLLQALGFLDLNLLSKHSCTRRKELFSLSQPGGHPHNWNKILAVCLSVIQE
LNDTVQEVNWKILANAPVRQPHTEKSVSNGSSDGLKQRTSSSNGTSKPAATAVKDKIVNG
LKKRSLLTFFTGEVPDSAHKNLFASAFIQIWAVDALSSLVVASFNEDSFGVVQMSLRDII
TAILNLQENIDKHFKLTGGVSRRVTKDSNSNDVPLKYLLQSSLRSSIYSIVNTFGKHLLD
IGLPVDTEKKLHNFLDYRE
NT seq 1680 nt   +upstreamnt  +downstreamnt
atggaaacaatagataagtggtttcagagagaagtacttcaatggagaacaggagcttct
gtagcatggtctgttatcacattgccagtcattagtattgtgtacttgtttctgactagt
ttccaactgtttcatccactgcagtggatcacaggttttgtgagcggcatgttttctttt
actttcgtcagtactgtaatattgatcatgattgtgaatgctggtttctgtatctactca
aagaacacatttacagtgataccatcaatgtcaataacaagattctcccagctgcctcag
ttgtttaaaggttctgtgatgctgtatgctgtagtttgttgggggtgtggcctcctactg
ggctggatgtgtacatgtatacttggagacagatatgctagtctgtcaaggaaatgtgct
gaaagcagtgacctgtactgtatcaatgaataccacctgtttattgtgttatatggaggt
tactcggggctcatgtatattgtgtaccactatataaaacagaacaatgttctacatttc
ccaacattacagcaagccaaatttttccaagtgagaggacagattcctaggacaggatgg
tcttcacttggtcatgtgatctggcagataaaattcttctatatattctattatttgttt
gggaacattccaagagatgctatagctgaaaccctttctctcaaacatgagagagaatca
cgattagacagcttgtatggactgttgctggactttgcactgttatggcagactttactg
gttggcttatttatccagttctcctggagttatggtgctctactctacaaagtctacaat
acacagagttacgagtttccagtgagtacaatgtttgagaacttcaagaacaaatgtctg
gtagatgcactgtcttgcacaaaactgcggctcctccaggcacttggtttcttggatttg
aatttactgtctaaacactcttgcacaagaagaaaagaactttttagtttgagtcagcct
ggtggacatccacataactggaacaaaattttggcagtttgtctatcagtgattcaggaa
ttaaatgacacagtgcaagaggtcaactggaaaatactggctaatgctcctgtcaggcaa
cctcatactgagaaatctgtgagtaatggttcaagtgatggtttaaaacagagaacgtct
tcgtctaatggaacatccaaacctgcagcaacagcagtcaaagataagatagtaaatggt
ttgaagaagcggtccttactgacatttttcacaggagaagtacctgacagtgcacacaag
aatctgtttgcttcagcttttatacagatatgggcagttgatgctttatcctcgttagta
gttgcatcattcaatgaagattcatttggagttgttcagatgtcattgagggatattata
acagctatacttaatttacaagagaatattgacaagcatttcaagttaacaggtggtgta
agcagacgtgtaacaaaagactctaacagtaatgatgtaccactcaaatatttactccag
tcatcattgaggagttccatctacagtattgtcaacacatttgggaaacatcttttagat
attggtctgccagtagacacagagaagaaactgcataacttcttagactacagagagtga

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