Mercenaria mercenaria (northern quahog): 123525941
Help
Entry
123525941 CDS
T07835
Name
(RefSeq) nucleoporin NDC1-like
KO
K14315
nucleoporin NDC1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123525941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123525941
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123525941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
UBA2_C
Motif
Other DBs
NCBI-GeneID:
123525941
NCBI-ProteinID:
XP_053393748
LinkDB
All DBs
Position
3:complement(4837587..4869155)
Genome browser
AA seq
559 aa
AA seq
DB search
METIDKWFQREVLQWRTGASVAWSVITLPVISIVYLFLTSFQLFHPLQWITGFVSGMFSF
TFVSTVILIMIVNAGFCIYSKNTFTVIPSMSITRFSQLPQLFKGSVMLYAVVCWGCGLLL
GWMCTCILGDRYASLSRKCAESSDLYCINEYHLFIVLYGGYSGLMYIVYHYIKQNNVLHF
PTLQQAKFFQVRGQIPRTGWSSLGHVIWQIKFFYIFYYLFGNIPRDAIAETLSLKHERES
RLDSLYGLLLDFALLWQTLLVGLFIQFSWSYGALLYKVYNTQSYEFPVSTMFENFKNKCL
VDALSCTKLRLLQALGFLDLNLLSKHSCTRRKELFSLSQPGGHPHNWNKILAVCLSVIQE
LNDTVQEVNWKILANAPVRQPHTEKSVSNGSSDGLKQRTSSSNGTSKPAATAVKDKIVNG
LKKRSLLTFFTGEVPDSAHKNLFASAFIQIWAVDALSSLVVASFNEDSFGVVQMSLRDII
TAILNLQENIDKHFKLTGGVSRRVTKDSNSNDVPLKYLLQSSLRSSIYSIVNTFGKHLLD
IGLPVDTEKKLHNFLDYRE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaatagataagtggtttcagagagaagtacttcaatggagaacaggagcttct
gtagcatggtctgttatcacattgccagtcattagtattgtgtacttgtttctgactagt
ttccaactgtttcatccactgcagtggatcacaggttttgtgagcggcatgttttctttt
actttcgtcagtactgtaatattgatcatgattgtgaatgctggtttctgtatctactca
aagaacacatttacagtgataccatcaatgtcaataacaagattctcccagctgcctcag
ttgtttaaaggttctgtgatgctgtatgctgtagtttgttgggggtgtggcctcctactg
ggctggatgtgtacatgtatacttggagacagatatgctagtctgtcaaggaaatgtgct
gaaagcagtgacctgtactgtatcaatgaataccacctgtttattgtgttatatggaggt
tactcggggctcatgtatattgtgtaccactatataaaacagaacaatgttctacatttc
ccaacattacagcaagccaaatttttccaagtgagaggacagattcctaggacaggatgg
tcttcacttggtcatgtgatctggcagataaaattcttctatatattctattatttgttt
gggaacattccaagagatgctatagctgaaaccctttctctcaaacatgagagagaatca
cgattagacagcttgtatggactgttgctggactttgcactgttatggcagactttactg
gttggcttatttatccagttctcctggagttatggtgctctactctacaaagtctacaat
acacagagttacgagtttccagtgagtacaatgtttgagaacttcaagaacaaatgtctg
gtagatgcactgtcttgcacaaaactgcggctcctccaggcacttggtttcttggatttg
aatttactgtctaaacactcttgcacaagaagaaaagaactttttagtttgagtcagcct
ggtggacatccacataactggaacaaaattttggcagtttgtctatcagtgattcaggaa
ttaaatgacacagtgcaagaggtcaactggaaaatactggctaatgctcctgtcaggcaa
cctcatactgagaaatctgtgagtaatggttcaagtgatggtttaaaacagagaacgtct
tcgtctaatggaacatccaaacctgcagcaacagcagtcaaagataagatagtaaatggt
ttgaagaagcggtccttactgacatttttcacaggagaagtacctgacagtgcacacaag
aatctgtttgcttcagcttttatacagatatgggcagttgatgctttatcctcgttagta
gttgcatcattcaatgaagattcatttggagttgttcagatgtcattgagggatattata
acagctatacttaatttacaagagaatattgacaagcatttcaagttaacaggtggtgta
agcagacgtgtaacaaaagactctaacagtaatgatgtaccactcaaatatttactccag
tcatcattgaggagttccatctacagtattgtcaacacatttgggaaacatcttttagat
attggtctgccagtagacacagagaagaaactgcataacttcttagactacagagagtga
DBGET
integrated database retrieval system