Mercenaria mercenaria (northern quahog): 123526371
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Entry
123526371 CDS
T07835
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03013
Nucleocytoplasmic transport
mmer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123526371
03015 mRNA surveillance pathway
123526371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123526371
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123526371
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123526371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
123526371
NCBI-ProteinID:
XP_045161433
LinkDB
All DBs
Position
14:10346783..10376228
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AA seq
517 aa
AA seq
DB search
MADDWGAIVDEQEKNLSQKVGGLNIAAGTSASSGDKAASSSEKAGGSTTVTQPSDSQGAS
SASGGAGAGAGDSASPKKETGAAGEDEAEASKEDESLLRKLLHSKLVSTKADLEVLQKDP
NSPLYSVKSFEALNLKPELLKGVYEMGFNAPSKIQETALPTLLADPPTNMIAQSQSGTGK
TAAFVLTMLSRVNPNLPHTQCLCLAPTYELALQIGGVTEKMAKNMPNTKIGYAVKGERIA
RGQKSSDHILIGTPGTVLDWCTKYKSVDPRKLAVFVLDEADVMIATQGHQDQSIRIQRQL
SKTCQMLLFSATYDEEVMKFAQAVIPNNPVVIKLRRDEESLDNIRQFYVQCRDQEDKFQA
LSNIYGAISIGQSMIFCATRRTAHWLSEKMTKDGHAVALLSGDLDIAQRAAIINRFRDGK
EKVLITTNVSARGIDVEMVTVVVNFDLPILQETKQADCETYLHRIGRTGRFGKAGLAINM
IDSNKSLQVMKAIERHFNRTIHKLDADDIEEIEKIST
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgactggggagccattgtagatgaacaggaaaaaaacttatctcaaaaggtt
ggaggtttgaatattgcagctggtacatcagccagtagtggggacaaggcagccagtagc
agtgaaaaggcaggaggtagcacaaccgtgacacagccctctgattcccagggagcatca
tcagctagtggcggggctggggcgggtgcgggagattcagcttcaccaaagaaggaaact
ggagctgcaggagaggatgaagcagaagcctctaaagaagacgagtctttgttaagaaaa
cttcttcattcgaaacttgtatcaacaaaagcagatttggaagtgttgcagaaggatccc
aactctcctttatattcagtgaaatcattcgaagccttgaacttaaaacctgaattgctg
aaaggagtgtatgaaatgggatttaatgctccatcaaaaatacaggagactgcactacca
acattacttgcagatccacctaccaatatgatagcacagagccagagtggtactggcaag
acagcagcctttgtactgaccatgttgagcagagtgaatccaaacctaccacatacacag
tgtctgtgcttggcaccaacatatgaattagctctgcagatagggggtgttacagagaag
atggccaaaaacatgccaaatactaaaattggatatgctgtgaagggagaaagaattgca
agaggccagaagagttcagatcacatattgatagggacaccaggaactgtactagactgg
tgtaccaagtataagagtgttgaccctcgtaagttggcagtatttgtcttggatgaggca
gatgttatgattgcaacacaagggcatcaagatcaaagtattcgtatacagagacagttg
tcaaagacttgtcagatgttattgttctcagccacctacgatgaagaagttatgaaattt
gcacaagcagttataccaaataatccagttgtgataaagttacggagggatgaagagagt
ttagacaatatcagacaattttatgtacagtgtcgagatcaggaagataaatttcaggct
ctctcaaatatatatggagcaatatctataggacagtctatgatcttctgtgctactcgg
agaacagctcactggttatcagaaaagatgacaaaggacggccatgctgtagcgttatta
tctggtgaccttgacattgcacagagggcagccataataaacaggtttagggacggcaag
gagaaagttttaatcacgacaaatgtttctgctagaggtattgatgttgagatggtaact
gtggtagtgaactttgacctgccaattctgcaggagaccaaacaggctgactgtgaaacc
taccttcacagaataggtcgaacaggaaggttcgggaaggcaggtctagcgatcaacatg
attgactcaaacaaatccctccaagtcatgaaagcaatagagagacatttcaatcgcaca
attcacaagttagatgcagacgacatcgaagaaatagaaaaaatcagtacttga
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