Mercenaria mercenaria (northern quahog): 123527040
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Entry
123527040 CDS
T07835
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123527040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmer03041
]
123527040
Spliceosome [BR:
mmer03041
]
Complex A
U1 snRNP components
U1 related factors
123527040
Complex B
123527040
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
123527040
NCBI-ProteinID:
XP_045162235
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All DBs
Position
1:complement(108613184..108830403)
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AA seq
805 aa
AA seq
DB search
MSFPPRPPVGMPPMTGMMSTGYTFTPMGMMPMGMGMMPPTTMIRPVVTNATATVVTRPKK
QLVPQEIDKDDKKEEKPPVTTVFVGNISERAPDSMVRTMLQRCGNVISWKRVQGASGKLQ
AFGFCEYEDPEATLRCMRLLNEWEIADKKLVVKVDAKTKTLLDDWKSKKKSEESKEDKEK
NGDKDDKTEEGEMKDDKDTLDEFTLREDRVAKAGLDAIMREYAFELAKEPATAKTVHEPV
SEIPKVPMPPIKQKDASQLRDTGLDDLNMEADTKDLINREIQSFRNLHKDIEDVEAEKER
EREREREKERRMAEERRRKEKERELQRLKELEMYEERRKATKRRESRSRSRSRSSSRGRS
SRRSRSRERERERERDRRARDRELEEEEEAYERRKMEKKIREKEIAYQERLKNWEARERK
KAREYEKEREREDERKAEELREARRLREFLEDYDDERDDPKFYKGSALERRLRERQKEKE
VDSRDRAKEKEELEEIRRKLLEEGHPDLEGEMAKIEREREEHLRPMLQINDNIAPHSPSE
SSSEDEHPASPPREPSEEESQEKFTALPNMKPTLQPVDESSRSAGEASADDEASRMSIGY
SEDSQQPVYGPNAREDSRLGFGAMKFSANASGPNSPTEQTSGKRKKLTVGDVFNQDDDDS
LDGAKKRKLVPLDYGDSGDDSASGLEGKKATSAEEKRAKIKTLIENIPTAKDELFAFQLD
WRIVDQSLMDKRIKPWVNKKIIEYIGEEEPTLTDFICQKVMAQSPPQNILNDVAMVLDEE
AEVFVVKMWRLLVYETEAKKAGLVK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccaccaagaccaccagttggaatgccaccaatgacaggcatgatgtctaca
ggctacacattcacaccaatgggtatgatgccaatgggtatgggtatgatgccgccaaca
acaatgattcgaccagttgtaacaaacgccacagcaacagtggtgacaagaccaaagaaa
caactcgtacctcaagaaatagataaagatgataaaaaagaagagaaacctccagtaaca
acagtgtttgttggaaatatcagtgaaagagcaccagattctatggtcagaactatgtta
cagcgctgtggaaatgttattagttggaagagggttcaaggtgcatcaggaaaattacaa
gcatttggattttgtgaatatgaagatccagaagccacactaagatgtatgaggttgtta
aatgaatgggaaatagcagataaaaaattagttgttaaggttgatgcaaaaacaaaaact
ctgttagatgactggaaaagcaaaaagaaaagtgaagaatcaaaggaagataaagagaaa
aatggggacaaagatgacaaaactgaggaaggagagatgaaagatgacaaagatacgcta
gacgagtttactctgagagaggacagagttgctaaggctggtcttgatgcaataatgaga
gaatacgcatttgaactagcaaaggaaccagctactgccaaaacagttcatgaaccagtc
agtgaaatccctaaagtacccatgcctccaattaaacagaaagacgcttcacaacttaga
gatacgggtttagatgatctaaatatggaggcagacactaaagacctgataaatcgtgaa
atccagtctttcagaaatctacacaaggacattgaggatgttgaggctgaaaaagaaaga
gaacgtgaacgagaaagagagaaagaacgacgtatggcagaagaacgacgtaggaaggaa
aaagagcgagagttgcagcgtcttaaagaattggagatgtatgaagagcgaaggaaagct
accaagagaagagagagtaggagtaggtcacggtcaaggtcaagttctcgtggaaggtca
tccagaaggtcacggtcgagagaaagggagagagaaagggaaagggatagaagagctcga
gacagagagctagaggaagaggaggaagcatatgaaagaagaaaaatggagaagaaaatc
agggagaaggaaatagcttatcaagagagattaaagaactgggaagccagagaaaggaaa
aaggcaagagaatatgaaaaggagagggagagagaagacgaaagaaaagctgaagagttg
cgggaagcaaggaggttacgagaattcttggaagattacgatgatgaacgagatgatcca
aagttttacaaaggcagtgctttagagcgaagattacgagaaagacagaaggaaaaagaa
gttgattcaagagacagagcaaaggagaaagaagagttggaggagatcagaagaaaatta
ttggaggaaggtcatcctgatcttgaaggagaaatggcaaagattgagagggagagggag
gagcatttacgtccaatgttacaaattaatgataacattgccccacattccccatcggaa
agttcaagcgaggatgaacatccagcaagtcctccaagagagccgtcggaggaggagagc
caggagaaatttacagcactaccaaacatgaaaccaacactacaacctgtagacgagtcg
tcacggtcagctggggaagcttctgcagatgatgaggcctctaggatgagtataggttat
agcgaagatagtcagcagcctgtttatggtccaaatgctcgtgaagattccagactaggt
tttggtgctatgaaatttagtgctaatgcatctggtccaaactcaccaacagaacaaacc
tctggtaaaagaaaaaagcttacagttggtgatgtgtttaatcaagatgatgatgattca
ttagacggtgctaagaaacgtaagcttgtgccactggactacggtgatagtggggatgat
agtgctagtggactcgaaggaaagaaagctaccagtgctgaggagaaacgtgctaaaata
aagacattgatagaaaatattccaaccgccaaagatgaattatttgcattccagctggac
tggagaatagtagatcagagtctaatggataagaggatcaagccgtgggttaacaagaaa
atcatagaatacattggggaagaagaaccgacgttgacagactttatatgtcagaaggtg
atggctcaaagtccaccacaaaatatactcaatgatgtagctatggttttggatgaggag
gcagaggtatttgtagtgaagatgtggcgattacttgtgtatgaaacagaagcaaagaaa
gcaggactagtgaaataa
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