Mercenaria mercenaria (northern quahog): 123527745 Help Entry 123527745         CDS       T07835                                  Name (RefSeq) DNA ligase 3-like   KO K10776   DNA ligase 3 [EC:6.5.1.1] Organism mmer  Mercenaria mercenaria (northern quahog) Pathway mmer03410   Base excision repair Brite KEGG Orthology (KO) [BR:mmer00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     123527745  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mmer03400]     123527745 Enzymes [BR:mmer01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      123527745 DNA repair and recombination proteins [BR:mmer03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Short Patch-BER factors      123527745 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N zf-PARP LIG3_BRCT DNA_ligase_A_C zf-CCHH BRCT_2 RNA_ligase mRNA_cap_enzyme BRCT DUF3802 Motif Other DBs NCBI-GeneID:  123527745 NCBI-ProteinID:  XP_053379767 LinkDB All DBs Position 14:complement(68007356..68061755) Genome browser AA seq 1059 aa AA seqDB search MSKWLTSLQSITRTYFRHLVTQLARNSADNLRLKFSVAQPQKSCLFTSTRHANIPCSQTS AVTCIERQTLNVHKFSTPSRLLIPNKLTSTDSIKCTCTSALIVDDRYFTMTENRYLTGYA KLGTSSCKKCKQKIDKGALRIAKLVSNPFSEDSGDMKQWFHPDCIFETFVRARATTKKIE DPDDLEGFSDLEQADKDTILTLIKGFLAKAGSPGKKKTPSKTTPAKNKPATSTTPIKQEP KPGPSSESGSTSNGAGPVSTSSGKDDSFREFRRLCADIAEENSYTGKTAIVKKFIMKGSS GDGYEGNLYLLLKLLLPGVVKSVYNLNNKQLVKLFSQIFHTNQKAMLEDLDQGDVAETVK IFFEQSKVLPPQKKCNFTIQEVNHYLEDLTKVTKEDDQEKVLAKIAQRCTGNDLKMVIRL IKHDLRINAGAKHILDALDPNAYAAFQASRDLRDVVERVIENRESGDKPGLGKKLSVRAS LMTPVLPMLAEACRSVGYAMKKCPNGFYAEIKYDGERVQLHKKGSHFQYFSRSLKPVLPH KVSHFKEYIPKAFPTGDDLILDAEVLLIDTNTGTPLPFGTLGKHKKEQFKDANVCLFVFD CLHLNGENIMDKPIKDRRKILQKEMIEIPNRILFSEMKHITEEDDLTDMMTRVFQEGLEG LVLKDVNSAYEPGKRHWLKIKKDYLNEGQMADSADLVVLGAFFGTGNKGGMMSVFLMGSY DPDSDKWCTVTKVGNGFDDSTLEKLQKELKMMKISKNASKVPDWLNVKKNMIPDFVSADP KSAPVWEIAGAEFSKAEVHTADGISIRFPRVTKVRDDKSWKEATDLPRLKELFKKSKDTS DIVIPGTKKGKGPGKSPAKKGKSSSGSDTDVDDDTNSNATPVKSKSSSVSSTPSKTATPS SGGGIMKFFSPKKEQSSPSKPTKRASENGDESSPAKKSKPECKYGSDCYQKNPDHLANFY HPPKVQQTSNGVLPNIFTGAKIFIPSDMKDYKTLRRYIIAFDGEVVPEFSRATATHAVVP SDYTGPAIKCEGVCVKDTWLWKCIKTKCLQPTEHFILGT NT seq 3180 nt NT seq  +upstreamnt  +downstreamnt atgagcaagtggttaaccagtctgcagtcaattacacggacatatttcaggcatttagtt acacaacttgcgagaaactcagcggataatctacgtttaaaattttctgtagctcagccg caaaaatcatgcctgttcacttcaactagacatgccaacattccatgttcacaaacatct gcagtcacttgcattgaaagacagactttaaatgtacataagttttcaacaccttctaga ttgcttatacctaataaattaacttctacagacagtatcaagtgcacatgcacttcagct ctaatagtagacgataggtattttacaatgacagaaaacagatatttgacgggttatgca aaacttgggacgtcaagctgtaagaaatgtaagcagaagattgacaaaggagcgctgagg atagcaaaactggtttcaaaccctttctcagaggattctggagacatgaaacagtggttc catccagattgtatttttgagacatttgtacgtgcacgagctacaacaaagaagattgaa gatcctgatgatttggagggattttctgacctcgaacaggcagacaaggataccatcttg acactgatcaaaggttttctggcaaaagctggttcacctggaaaaaagaaaactccatca aagactacacctgctaagaataagccagcaaccagcactacacctataaaacaggaacca aagccagggccctcatcagaatctggatcaacaagcaatggtgccggtccagtgagcact tcgagtggcaaagatgactccttcagggaattccgtcgcctttgtgctgatattgcagaa gaaaatagctacactggaaaaacagcaattgtcaaaaagtttatcatgaaagggtcaagt ggagatggctatgaaggcaatctatatttactgttgaagctgctgctgcctggtgttgtg aaaagtgtgtacaacttgaacaataagcagctggtcaagttattcagtcagatttttcac acaaatcagaaagctatgttagaagatttggaccaaggtgatgttgccgagactgtgaag attttctttgagcaaagcaaagtccttcctcctcagaaaaaatgtaattttacaatacaa gaggtgaaccattatttggaggacttgacaaaggtcacaaaggaggatgatcaggagaaa gtacttgcaaagattgctcaaaggtgtacaggcaatgacttgaagatggtgatcagactg atcaaacatgatctcaggattaatgcaggggctaaacatatactggatgcccttgacccc aatgcatatgcagcattccaggcatcacgtgaccttcgagatgttgtggagagagtgata gagaacagagaaagtggggataaacctggtcttggcaagaaattgtctgtcagggcctct ttaatgactccagtgttacccatgttggcagaagcatgtagatcagtgggctatgccatg aagaaatgtcccaatggtttctatgctgagatcaagtatgatggcgagagagtgcagcta cacaagaaaggatcccactttcagtatttcagtagaagtctgaaacctgtactgccacat aaggtatcacatttcaaggaatatattccgaaagctttccctactggagatgatctgatc ctggatgctgaagtccttcttattgacaccaatacaggaacacctctgccatttggtaca cttggtaaacataagaaagaacagttcaaggatgccaatgtgtgtttgtttgtatttgac tgtcttcatctgaatggagaaaacatcatggacaaaccaatcaaggacagaagaaaaatt ctgcaaaaggaaatgatagaaatacctaacagaatattgttctctgaaatgaagcatatc acagaagaggatgacctcacagatatgatgactagagtgtttcaggaaggtttagaaggc ctggtactcaaagatgttaatagcgcttatgagcctggtaaacgtcattggttgaagata aagaaggattatttaaatgaaggtcaaatggctgactcggcagatttggttgtccttgga gctttctttggaactggaaataaaggtggaatgatgtcagtgtttctaatgggatcatac gaccctgacagtgacaaatggtgcacagtcaccaaagttggtaatggatttgatgactca acattagagaaattgcaaaaagagttgaaaatgatgaaaatcagcaagaacgccagcaag gtgccagactggcttaatgttaagaagaatatgataccagactttgtgtcagctgatcca aaaagtgcaccagtctgggaaatagctggagcagagttcagtaaagctgaggtacataca gcagatggaatatctatccgatttcctcgtgtaaccaaggtgagagatgacaaatcctgg aaggaagccacagatttacccaggctcaaggagctgttcaagaagtcaaaagacacatcc gatattgtgatcccaggtacaaagaagggcaagggaccaggaaaatctccagcaaagaag gggaaatcatccagtggcagtgatactgatgttgatgacgatacaaacagcaatgctaca cctgtaaaatccaaaagttcttcagtgtcttctacaccaagtaaaactgctacaccatct agtggtggtggaataatgaagtttttttcaccaaaaaaagaacaaagttctccgtccaaa ccaaccaagcgagccagtgagaatggcgatgaatcaagcccagctaagaaatccaaacct gagtgtaaatatggttcagactgttaccagaagaaccctgaccacctagccaacttctac cacccacctaaagtacagcagacgtcaaatggggttttaccaaatattttcactggagcc aagatcttcattccgagtgatatgaaggattacaagacactgaggagatatatcatagct tttgatggagaggttgttccagagttcagtagagcaacagcaactcatgcagtggtacca agtgattatacaggtccagccattaaatgtgagggtgtttgtgtgaaagacacttggttg tggaaatgtatcaaaacaaaatgtttgcagccaacagaacactttattctgggtacttga

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